co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G62290

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway	0.00E+00
2	GO:0043048: dolichyl monophosphate biosynthetic process	0.00E+00
3	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
4	GO:0006212: uracil catabolic process	1.70E-07
5	GO:0019483: beta-alanine biosynthetic process	1.70E-07
6	GO:0006605: protein targeting	2.11E-05
7	GO:0043562: cellular response to nitrogen levels	2.72E-05
8	GO:0015969: guanosine tetraphosphate metabolic process	5.34E-05
9	GO:0080136: priming of cellular response to stress	5.34E-05
10	GO:0010200: response to chitin	9.59E-05
11	GO:0046777: protein autophosphorylation	1.02E-04
12	GO:0048281: inflorescence morphogenesis	2.22E-04
13	GO:0010359: regulation of anion channel activity	2.22E-04
14	GO:0061158: 3'-UTR-mediated mRNA destabilization	2.22E-04
15	GO:0071492: cellular response to UV-A	2.22E-04
16	GO:0006624: vacuolar protein processing	3.25E-04
17	GO:0009738: abscisic acid-activated signaling pathway	4.29E-04
18	GO:0060548: negative regulation of cell death	4.35E-04
19	GO:0071486: cellular response to high light intensity	4.35E-04
20	GO:0010483: pollen tube reception	4.35E-04
21	GO:0009765: photosynthesis, light harvesting	4.35E-04
22	GO:2000038: regulation of stomatal complex development	4.35E-04
23	GO:0010188: response to microbial phytotoxin	4.35E-04
24	GO:0006878: cellular copper ion homeostasis	4.35E-04
25	GO:0009611: response to wounding	4.67E-04
26	GO:0030308: negative regulation of cell growth	5.52E-04
27	GO:0070814: hydrogen sulfide biosynthetic process	6.76E-04
28	GO:1902456: regulation of stomatal opening	6.76E-04
29	GO:0002238: response to molecule of fungal origin	6.76E-04
30	GO:0006970: response to osmotic stress	7.04E-04
31	GO:2000037: regulation of stomatal complex patterning	8.05E-04
32	GO:0010044: response to aluminum ion	9.40E-04
33	GO:0006955: immune response	9.40E-04
34	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	9.40E-04
35	GO:0009819: drought recovery	1.08E-03
36	GO:0043068: positive regulation of programmed cell death	1.08E-03
37	GO:0010120: camalexin biosynthetic process	1.23E-03
38	GO:0030968: endoplasmic reticulum unfolded protein response	1.23E-03
39	GO:0051865: protein autoubiquitination	1.38E-03
40	GO:0051603: proteolysis involved in cellular protein catabolic process	1.42E-03
41	GO:0008202: steroid metabolic process	1.54E-03
42	GO:0050832: defense response to fungus	1.62E-03
43	GO:0048367: shoot system development	1.66E-03
44	GO:0000103: sulfate assimilation	1.71E-03
45	GO:0018105: peptidyl-serine phosphorylation	1.99E-03
46	GO:0000266: mitochondrial fission	2.06E-03
47	GO:0012501: programmed cell death	2.06E-03
48	GO:0006807: nitrogen compound metabolic process	2.25E-03
49	GO:0010229: inflorescence development	2.25E-03
50	GO:0010167: response to nitrate	2.63E-03
51	GO:0070588: calcium ion transmembrane transport	2.63E-03
52	GO:0035556: intracellular signal transduction	2.98E-03
53	GO:0031348: negative regulation of defense response	3.68E-03
54	GO:0006470: protein dephosphorylation	3.77E-03
55	GO:0009617: response to bacterium	3.93E-03
56	GO:0010091: trichome branching	4.13E-03
57	GO:0042631: cellular response to water deprivation	4.60E-03
58	GO:0071472: cellular response to salt stress	4.84E-03
59	GO:0006662: glycerol ether metabolic process	4.84E-03
60	GO:0048544: recognition of pollen	5.09E-03
61	GO:0010183: pollen tube guidance	5.34E-03
62	GO:0009749: response to glucose	5.34E-03
63	GO:0008654: phospholipid biosynthetic process	5.34E-03
64	GO:0000302: response to reactive oxygen species	5.60E-03
65	GO:0009723: response to ethylene	5.89E-03
66	GO:0006464: cellular protein modification process	6.39E-03
67	GO:0006914: autophagy	6.39E-03
68	GO:0016192: vesicle-mediated transport	6.63E-03
69	GO:0071805: potassium ion transmembrane transport	6.66E-03
70	GO:0006979: response to oxidative stress	6.86E-03
71	GO:0051607: defense response to virus	6.94E-03
72	GO:0009816: defense response to bacterium, incompatible interaction	7.50E-03
73	GO:0006468: protein phosphorylation	8.63E-03
74	GO:0048481: plant ovule development	8.68E-03
75	GO:0009751: response to salicylic acid	9.17E-03
76	GO:0007568: aging	9.61E-03
77	GO:0010119: regulation of stomatal movement	9.61E-03
78	GO:0048364: root development	9.71E-03
79	GO:0009853: photorespiration	1.02E-02
80	GO:0034599: cellular response to oxidative stress	1.06E-02
81	GO:0006631: fatty acid metabolic process	1.16E-02
82	GO:0006486: protein glycosylation	1.51E-02
83	GO:0006813: potassium ion transport	1.51E-02
84	GO:0010224: response to UV-B	1.55E-02
85	GO:0009737: response to abscisic acid	1.78E-02
86	GO:0009626: plant-type hypersensitive response	1.78E-02
87	GO:0042545: cell wall modification	1.90E-02
88	GO:0009790: embryo development	2.55E-02
89	GO:0006633: fatty acid biosynthetic process	2.68E-02
90	GO:0040008: regulation of growth	2.77E-02
91	GO:0010150: leaf senescence	2.87E-02
92	GO:0045490: pectin catabolic process	2.87E-02
93	GO:0010228: vegetative to reproductive phase transition of meristem	2.96E-02
94	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.11E-02
95	GO:0010468: regulation of gene expression	3.25E-02
96	GO:0008380: RNA splicing	3.25E-02
97	GO:0007049: cell cycle	4.23E-02
98	GO:0015031: protein transport	4.26E-02
99	GO:0009409: response to cold	4.53E-02

Rank	GO Term	Adjusted P value
1	GO:0004168: dolichol kinase activity	0.00E+00
2	GO:0003837: beta-ureidopropionase activity	0.00E+00
3	GO:0004157: dihydropyrimidinase activity	0.00E+00
4	GO:0019786: Atg8-specific protease activity	5.34E-05
5	GO:0019779: Atg8 activating enzyme activity	1.30E-04
6	GO:0008728: GTP diphosphokinase activity	1.30E-04
7	GO:0005047: signal recognition particle binding	2.22E-04
8	GO:0004781: sulfate adenylyltransferase (ATP) activity	2.22E-04
9	GO:0004197: cysteine-type endopeptidase activity	3.71E-04
10	GO:0019776: Atg8 ligase activity	4.35E-04
11	GO:0004301: epoxide hydrolase activity	4.35E-04
12	GO:0005496: steroid binding	5.52E-04
13	GO:0009931: calcium-dependent protein serine/threonine kinase activity	5.56E-04
14	GO:0004683: calmodulin-dependent protein kinase activity	5.86E-04
15	GO:0005524: ATP binding	5.95E-04
16	GO:0004605: phosphatidate cytidylyltransferase activity	6.76E-04
17	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	8.05E-04
18	GO:0102391: decanoate--CoA ligase activity	8.05E-04
19	GO:0004467: long-chain fatty acid-CoA ligase activity	9.40E-04
20	GO:0005525: GTP binding	9.57E-04
21	GO:0008142: oxysterol binding	1.23E-03
22	GO:0003924: GTPase activity	1.35E-03
23	GO:0005515: protein binding	1.54E-03
24	GO:0004713: protein tyrosine kinase activity	1.71E-03
25	GO:0004521: endoribonuclease activity	2.06E-03
26	GO:0005388: calcium-transporting ATPase activity	2.25E-03
27	GO:0004672: protein kinase activity	2.33E-03
28	GO:0004175: endopeptidase activity	2.43E-03
29	GO:0043424: protein histidine kinase binding	3.24E-03
30	GO:0015079: potassium ion transmembrane transporter activity	3.24E-03
31	GO:0004707: MAP kinase activity	3.46E-03
32	GO:0033612: receptor serine/threonine kinase binding	3.46E-03
33	GO:0016301: kinase activity	3.74E-03
34	GO:0003727: single-stranded RNA binding	4.13E-03
35	GO:0047134: protein-disulfide reductase activity	4.36E-03
36	GO:0005516: calmodulin binding	4.67E-03
37	GO:0004791: thioredoxin-disulfide reductase activity	5.09E-03
38	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	6.12E-03
39	GO:0005509: calcium ion binding	6.13E-03
40	GO:0046872: metal ion binding	7.50E-03
41	GO:0016168: chlorophyll binding	7.50E-03
42	GO:0004722: protein serine/threonine phosphatase activity	8.28E-03
43	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.09E-02
44	GO:0005198: structural molecule activity	1.33E-02
45	GO:0045330: aspartyl esterase activity	1.63E-02
46	GO:0008234: cysteine-type peptidase activity	1.63E-02
47	GO:0030599: pectinesterase activity	1.86E-02
48	GO:0015035: protein disulfide oxidoreductase activity	1.98E-02
49	GO:0046910: pectinesterase inhibitor activity	2.73E-02
50	GO:0008017: microtubule binding	2.96E-02
51	GO:0061630: ubiquitin protein ligase activity	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0005886: plasma membrane	3.01E-05
3	GO:0005783: endoplasmic reticulum	1.27E-04
4	GO:0042406: extrinsic component of endoplasmic reticulum membrane	2.22E-04
5	GO:0030139: endocytic vesicle	2.22E-04
6	GO:0005775: vacuolar lumen	3.25E-04
7	GO:0032585: multivesicular body membrane	3.25E-04
8	GO:0000323: lytic vacuole	3.25E-04
9	GO:0005776: autophagosome	4.35E-04
10	GO:0000164: protein phosphatase type 1 complex	5.52E-04
11	GO:0000421: autophagosome membrane	1.08E-03
12	GO:0005773: vacuole	1.18E-03
13	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.23E-03
14	GO:0031901: early endosome membrane	1.38E-03
15	GO:0005764: lysosome	2.43E-03
16	GO:0005623: cell	2.47E-03
17	GO:0030176: integral component of endoplasmic reticulum membrane	2.63E-03
18	GO:0005769: early endosome	2.83E-03
19	GO:0045271: respiratory chain complex I	3.24E-03
20	GO:0031410: cytoplasmic vesicle	3.68E-03
21	GO:0009523: photosystem II	5.34E-03
22	GO:0005874: microtubule	6.09E-03
23	GO:0071944: cell periphery	6.12E-03
24	GO:0005829: cytosol	9.17E-03
25	GO:0016021: integral component of membrane	1.19E-02
26	GO:0031966: mitochondrial membrane	1.44E-02
27	GO:0010008: endosome membrane	1.74E-02
28	GO:0005747: mitochondrial respiratory chain complex I	1.74E-02
29	GO:0012505: endomembrane system	1.90E-02
30	GO:0009506: plasmodesma	2.17E-02
31	GO:0009524: phragmoplast	2.37E-02
32	GO:0005768: endosome	3.02E-02
33	GO:0005615: extracellular space	3.11E-02
34	GO:0005774: vacuolar membrane	3.26E-02