GO Enrichment Analysis of Co-expressed Genes with
AT3G61990
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033542: fatty acid beta-oxidation, unsaturated, even number | 0.00E+00 |
| 2 | GO:0032780: negative regulation of ATPase activity | 0.00E+00 |
| 3 | GO:0006858: extracellular transport | 0.00E+00 |
| 4 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 1.28E-07 |
| 5 | GO:0051788: response to misfolded protein | 5.67E-07 |
| 6 | GO:0046686: response to cadmium ion | 2.45E-06 |
| 7 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.21E-05 |
| 8 | GO:0006097: glyoxylate cycle | 1.60E-05 |
| 9 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.72E-05 |
| 10 | GO:0043248: proteasome assembly | 2.42E-05 |
| 11 | GO:0006098: pentose-phosphate shunt | 9.49E-05 |
| 12 | GO:0080093: regulation of photorespiration | 1.04E-04 |
| 13 | GO:0048455: stamen formation | 1.04E-04 |
| 14 | GO:0031998: regulation of fatty acid beta-oxidation | 1.04E-04 |
| 15 | GO:0035266: meristem growth | 1.04E-04 |
| 16 | GO:0007292: female gamete generation | 1.04E-04 |
| 17 | GO:0006805: xenobiotic metabolic process | 1.04E-04 |
| 18 | GO:1990641: response to iron ion starvation | 1.04E-04 |
| 19 | GO:0080173: male-female gamete recognition during double fertilization | 1.04E-04 |
| 20 | GO:0006099: tricarboxylic acid cycle | 1.84E-04 |
| 21 | GO:1902000: homogentisate catabolic process | 2.44E-04 |
| 22 | GO:0019441: tryptophan catabolic process to kynurenine | 2.44E-04 |
| 23 | GO:0097054: L-glutamate biosynthetic process | 2.44E-04 |
| 24 | GO:0009156: ribonucleoside monophosphate biosynthetic process | 2.44E-04 |
| 25 | GO:0031648: protein destabilization | 2.44E-04 |
| 26 | GO:0019521: D-gluconate metabolic process | 2.44E-04 |
| 27 | GO:0019374: galactolipid metabolic process | 2.44E-04 |
| 28 | GO:0007051: spindle organization | 2.44E-04 |
| 29 | GO:0006101: citrate metabolic process | 2.44E-04 |
| 30 | GO:0009809: lignin biosynthetic process | 3.65E-04 |
| 31 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.81E-04 |
| 32 | GO:0010359: regulation of anion channel activity | 4.05E-04 |
| 33 | GO:0009072: aromatic amino acid family metabolic process | 4.05E-04 |
| 34 | GO:0060968: regulation of gene silencing | 4.05E-04 |
| 35 | GO:0010498: proteasomal protein catabolic process | 4.05E-04 |
| 36 | GO:0031348: negative regulation of defense response | 4.52E-04 |
| 37 | GO:0055114: oxidation-reduction process | 5.08E-04 |
| 38 | GO:0010255: glucose mediated signaling pathway | 5.82E-04 |
| 39 | GO:0042823: pyridoxal phosphate biosynthetic process | 5.82E-04 |
| 40 | GO:0006537: glutamate biosynthetic process | 5.82E-04 |
| 41 | GO:0009408: response to heat | 7.40E-04 |
| 42 | GO:0009165: nucleotide biosynthetic process | 7.73E-04 |
| 43 | GO:0019676: ammonia assimilation cycle | 7.73E-04 |
| 44 | GO:0010363: regulation of plant-type hypersensitive response | 7.73E-04 |
| 45 | GO:0046283: anthocyanin-containing compound metabolic process | 9.77E-04 |
| 46 | GO:0006405: RNA export from nucleus | 9.77E-04 |
| 47 | GO:0009697: salicylic acid biosynthetic process | 9.77E-04 |
| 48 | GO:0006464: cellular protein modification process | 9.85E-04 |
| 49 | GO:0006574: valine catabolic process | 1.19E-03 |
| 50 | GO:0006751: glutathione catabolic process | 1.19E-03 |
| 51 | GO:0048827: phyllome development | 1.19E-03 |
| 52 | GO:0048232: male gamete generation | 1.19E-03 |
| 53 | GO:0006979: response to oxidative stress | 1.19E-03 |
| 54 | GO:0035435: phosphate ion transmembrane transport | 1.19E-03 |
| 55 | GO:0000060: protein import into nucleus, translocation | 1.19E-03 |
| 56 | GO:1902456: regulation of stomatal opening | 1.19E-03 |
| 57 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.36E-03 |
| 58 | GO:0048280: vesicle fusion with Golgi apparatus | 1.43E-03 |
| 59 | GO:0009738: abscisic acid-activated signaling pathway | 1.66E-03 |
| 60 | GO:0006955: immune response | 1.67E-03 |
| 61 | GO:0048528: post-embryonic root development | 1.67E-03 |
| 62 | GO:0000082: G1/S transition of mitotic cell cycle | 1.67E-03 |
| 63 | GO:0010043: response to zinc ion | 1.73E-03 |
| 64 | GO:0045087: innate immune response | 1.90E-03 |
| 65 | GO:0010078: maintenance of root meristem identity | 1.93E-03 |
| 66 | GO:0006102: isocitrate metabolic process | 1.93E-03 |
| 67 | GO:0006644: phospholipid metabolic process | 1.93E-03 |
| 68 | GO:0009657: plastid organization | 2.21E-03 |
| 69 | GO:0010112: regulation of systemic acquired resistance | 2.49E-03 |
| 70 | GO:0000373: Group II intron splicing | 2.49E-03 |
| 71 | GO:0009636: response to toxic substance | 2.73E-03 |
| 72 | GO:0006855: drug transmembrane transport | 2.84E-03 |
| 73 | GO:0009651: response to salt stress | 2.88E-03 |
| 74 | GO:0043069: negative regulation of programmed cell death | 3.10E-03 |
| 75 | GO:0048829: root cap development | 3.10E-03 |
| 76 | GO:0006896: Golgi to vacuole transport | 3.10E-03 |
| 77 | GO:0010015: root morphogenesis | 3.42E-03 |
| 78 | GO:0015770: sucrose transport | 3.42E-03 |
| 79 | GO:0006108: malate metabolic process | 4.09E-03 |
| 80 | GO:0009266: response to temperature stimulus | 4.44E-03 |
| 81 | GO:0009933: meristem structural organization | 4.44E-03 |
| 82 | GO:0009624: response to nematode | 4.64E-03 |
| 83 | GO:0018105: peptidyl-serine phosphorylation | 4.77E-03 |
| 84 | GO:0090351: seedling development | 4.80E-03 |
| 85 | GO:0034976: response to endoplasmic reticulum stress | 5.18E-03 |
| 86 | GO:0009116: nucleoside metabolic process | 5.56E-03 |
| 87 | GO:0035428: hexose transmembrane transport | 6.76E-03 |
| 88 | GO:0006012: galactose metabolic process | 7.18E-03 |
| 89 | GO:0016117: carotenoid biosynthetic process | 8.05E-03 |
| 90 | GO:0042147: retrograde transport, endosome to Golgi | 8.05E-03 |
| 91 | GO:0051028: mRNA transport | 8.05E-03 |
| 92 | GO:0010118: stomatal movement | 8.49E-03 |
| 93 | GO:0046323: glucose import | 8.95E-03 |
| 94 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 8.95E-03 |
| 95 | GO:0006623: protein targeting to vacuole | 9.90E-03 |
| 96 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.04E-02 |
| 97 | GO:0006635: fatty acid beta-oxidation | 1.04E-02 |
| 98 | GO:0009630: gravitropism | 1.09E-02 |
| 99 | GO:0010583: response to cyclopentenone | 1.09E-02 |
| 100 | GO:1901657: glycosyl compound metabolic process | 1.14E-02 |
| 101 | GO:0030163: protein catabolic process | 1.14E-02 |
| 102 | GO:0055085: transmembrane transport | 1.17E-02 |
| 103 | GO:0009658: chloroplast organization | 1.24E-02 |
| 104 | GO:0009615: response to virus | 1.35E-02 |
| 105 | GO:0010029: regulation of seed germination | 1.40E-02 |
| 106 | GO:0009816: defense response to bacterium, incompatible interaction | 1.40E-02 |
| 107 | GO:0006974: cellular response to DNA damage stimulus | 1.45E-02 |
| 108 | GO:0006950: response to stress | 1.51E-02 |
| 109 | GO:0046777: protein autophosphorylation | 1.65E-02 |
| 110 | GO:0048767: root hair elongation | 1.68E-02 |
| 111 | GO:0010311: lateral root formation | 1.68E-02 |
| 112 | GO:0006499: N-terminal protein myristoylation | 1.74E-02 |
| 113 | GO:0009407: toxin catabolic process | 1.74E-02 |
| 114 | GO:0007568: aging | 1.80E-02 |
| 115 | GO:0010119: regulation of stomatal movement | 1.80E-02 |
| 116 | GO:0009853: photorespiration | 1.92E-02 |
| 117 | GO:0016310: phosphorylation | 1.97E-02 |
| 118 | GO:0006839: mitochondrial transport | 2.11E-02 |
| 119 | GO:0006897: endocytosis | 2.17E-02 |
| 120 | GO:0032259: methylation | 2.18E-02 |
| 121 | GO:0042542: response to hydrogen peroxide | 2.24E-02 |
| 122 | GO:0009744: response to sucrose | 2.30E-02 |
| 123 | GO:0051707: response to other organism | 2.30E-02 |
| 124 | GO:0009644: response to high light intensity | 2.43E-02 |
| 125 | GO:0008643: carbohydrate transport | 2.43E-02 |
| 126 | GO:0009965: leaf morphogenesis | 2.50E-02 |
| 127 | GO:0008152: metabolic process | 2.51E-02 |
| 128 | GO:0009846: pollen germination | 2.70E-02 |
| 129 | GO:0006508: proteolysis | 2.75E-02 |
| 130 | GO:0048367: shoot system development | 3.28E-02 |
| 131 | GO:0006810: transport | 3.41E-02 |
| 132 | GO:0009553: embryo sac development | 3.58E-02 |
| 133 | GO:0006468: protein phosphorylation | 4.01E-02 |
| 134 | GO:0009555: pollen development | 4.03E-02 |
| 135 | GO:0035556: intracellular signal transduction | 4.25E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016508: long-chain-enoyl-CoA hydratase activity | 0.00E+00 |
| 2 | GO:0042030: ATPase inhibitor activity | 0.00E+00 |
| 3 | GO:0016034: maleylacetoacetate isomerase activity | 0.00E+00 |
| 4 | GO:0004622: lysophospholipase activity | 0.00E+00 |
| 5 | GO:0003846: 2-acylglycerol O-acyltransferase activity | 0.00E+00 |
| 6 | GO:0015930: glutamate synthase activity | 0.00E+00 |
| 7 | GO:0036402: proteasome-activating ATPase activity | 1.28E-07 |
| 8 | GO:0017025: TBP-class protein binding | 7.30E-06 |
| 9 | GO:0031593: polyubiquitin binding | 2.42E-05 |
| 10 | GO:0005524: ATP binding | 2.88E-05 |
| 11 | GO:0016887: ATPase activity | 3.36E-05 |
| 12 | GO:0008113: peptide-methionine (S)-S-oxide reductase activity | 3.43E-05 |
| 13 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 3.43E-05 |
| 14 | GO:0016041: glutamate synthase (ferredoxin) activity | 1.04E-04 |
| 15 | GO:0090430: caffeoyl-CoA: alcohol caffeoyl transferase activity | 1.04E-04 |
| 16 | GO:0008692: 3-hydroxybutyryl-CoA epimerase activity | 1.04E-04 |
| 17 | GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity | 1.04E-04 |
| 18 | GO:0019172: glyoxalase III activity | 2.44E-04 |
| 19 | GO:0004061: arylformamidase activity | 2.44E-04 |
| 20 | GO:0015036: disulfide oxidoreductase activity | 2.44E-04 |
| 21 | GO:0008517: folic acid transporter activity | 2.44E-04 |
| 22 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 2.44E-04 |
| 23 | GO:0003994: aconitate hydratase activity | 2.44E-04 |
| 24 | GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity | 2.44E-04 |
| 25 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 2.44E-04 |
| 26 | GO:0050736: O-malonyltransferase activity | 2.44E-04 |
| 27 | GO:0003840: gamma-glutamyltransferase activity | 4.05E-04 |
| 28 | GO:0036374: glutathione hydrolase activity | 4.05E-04 |
| 29 | GO:0016805: dipeptidase activity | 4.05E-04 |
| 30 | GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity | 4.05E-04 |
| 31 | GO:0004298: threonine-type endopeptidase activity | 4.13E-04 |
| 32 | GO:0016491: oxidoreductase activity | 4.53E-04 |
| 33 | GO:0010178: IAA-amino acid conjugate hydrolase activity | 5.82E-04 |
| 34 | GO:0004165: dodecenoyl-CoA delta-isomerase activity | 5.82E-04 |
| 35 | GO:0004300: enoyl-CoA hydratase activity | 5.82E-04 |
| 36 | GO:0004749: ribose phosphate diphosphokinase activity | 5.82E-04 |
| 37 | GO:0001653: peptide receptor activity | 5.82E-04 |
| 38 | GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity | 5.82E-04 |
| 39 | GO:0009916: alternative oxidase activity | 7.73E-04 |
| 40 | GO:0005496: steroid binding | 9.77E-04 |
| 41 | GO:0051538: 3 iron, 4 sulfur cluster binding | 9.77E-04 |
| 42 | GO:0015145: monosaccharide transmembrane transporter activity | 9.77E-04 |
| 43 | GO:0016615: malate dehydrogenase activity | 1.19E-03 |
| 44 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.29E-03 |
| 45 | GO:0004683: calmodulin-dependent protein kinase activity | 1.36E-03 |
| 46 | GO:0005215: transporter activity | 1.40E-03 |
| 47 | GO:0030060: L-malate dehydrogenase activity | 1.43E-03 |
| 48 | GO:0003978: UDP-glucose 4-epimerase activity | 1.43E-03 |
| 49 | GO:0004620: phospholipase activity | 1.67E-03 |
| 50 | GO:0008506: sucrose:proton symporter activity | 1.67E-03 |
| 51 | GO:0008235: metalloexopeptidase activity | 1.67E-03 |
| 52 | GO:0052747: sinapyl alcohol dehydrogenase activity | 1.93E-03 |
| 53 | GO:0004364: glutathione transferase activity | 2.34E-03 |
| 54 | GO:0047617: acyl-CoA hydrolase activity | 2.79E-03 |
| 55 | GO:0045309: protein phosphorylated amino acid binding | 2.79E-03 |
| 56 | GO:0005507: copper ion binding | 2.99E-03 |
| 57 | GO:0008171: O-methyltransferase activity | 3.10E-03 |
| 58 | GO:0019904: protein domain specific binding | 3.42E-03 |
| 59 | GO:0004177: aminopeptidase activity | 3.42E-03 |
| 60 | GO:0008559: xenobiotic-transporting ATPase activity | 3.42E-03 |
| 61 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 3.75E-03 |
| 62 | GO:0004022: alcohol dehydrogenase (NAD) activity | 4.09E-03 |
| 63 | GO:0005315: inorganic phosphate transmembrane transporter activity | 4.09E-03 |
| 64 | GO:0015114: phosphate ion transmembrane transporter activity | 4.09E-03 |
| 65 | GO:0008131: primary amine oxidase activity | 4.44E-03 |
| 66 | GO:0043424: protein histidine kinase binding | 5.95E-03 |
| 67 | GO:0022891: substrate-specific transmembrane transporter activity | 7.18E-03 |
| 68 | GO:0003756: protein disulfide isomerase activity | 7.61E-03 |
| 69 | GO:0008536: Ran GTPase binding | 8.95E-03 |
| 70 | GO:0010181: FMN binding | 9.42E-03 |
| 71 | GO:0005355: glucose transmembrane transporter activity | 9.42E-03 |
| 72 | GO:0004872: receptor activity | 9.90E-03 |
| 73 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.02E-02 |
| 74 | GO:0048038: quinone binding | 1.04E-02 |
| 75 | GO:0004197: cysteine-type endopeptidase activity | 1.09E-02 |
| 76 | GO:0016740: transferase activity | 1.11E-02 |
| 77 | GO:0008237: metallopeptidase activity | 1.24E-02 |
| 78 | GO:0005516: calmodulin binding | 1.45E-02 |
| 79 | GO:0102483: scopolin beta-glucosidase activity | 1.51E-02 |
| 80 | GO:0008233: peptidase activity | 1.51E-02 |
| 81 | GO:0005096: GTPase activator activity | 1.68E-02 |
| 82 | GO:0015238: drug transmembrane transporter activity | 1.68E-02 |
| 83 | GO:0030145: manganese ion binding | 1.80E-02 |
| 84 | GO:0005509: calcium ion binding | 1.91E-02 |
| 85 | GO:0008422: beta-glucosidase activity | 2.04E-02 |
| 86 | GO:0000149: SNARE binding | 2.04E-02 |
| 87 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.11E-02 |
| 88 | GO:0005484: SNAP receptor activity | 2.30E-02 |
| 89 | GO:0051287: NAD binding | 2.64E-02 |
| 90 | GO:0008234: cysteine-type peptidase activity | 3.06E-02 |
| 91 | GO:0051082: unfolded protein binding | 3.66E-02 |
| 92 | GO:0008026: ATP-dependent helicase activity | 3.81E-02 |
| 93 | GO:0015144: carbohydrate transmembrane transporter activity | 4.87E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019822: P4 peroxisome | 0.00E+00 |
| 2 | GO:0046862: chromoplast membrane | 0.00E+00 |
| 3 | GO:0000502: proteasome complex | 5.79E-10 |
| 4 | GO:0008540: proteasome regulatory particle, base subcomplex | 1.17E-08 |
| 5 | GO:0031597: cytosolic proteasome complex | 2.27E-07 |
| 6 | GO:0031595: nuclear proteasome complex | 3.74E-07 |
| 7 | GO:0005829: cytosol | 2.75E-06 |
| 8 | GO:0005773: vacuole | 7.30E-06 |
| 9 | GO:0031314: extrinsic component of mitochondrial inner membrane | 2.44E-04 |
| 10 | GO:0005839: proteasome core complex | 4.13E-04 |
| 11 | GO:0005777: peroxisome | 4.35E-04 |
| 12 | GO:0005774: vacuolar membrane | 8.85E-04 |
| 13 | GO:0030127: COPII vesicle coat | 1.19E-03 |
| 14 | GO:0030140: trans-Golgi network transport vesicle | 1.19E-03 |
| 15 | GO:0005788: endoplasmic reticulum lumen | 1.23E-03 |
| 16 | GO:0000325: plant-type vacuole | 1.73E-03 |
| 17 | GO:0005794: Golgi apparatus | 1.80E-03 |
| 18 | GO:0012507: ER to Golgi transport vesicle membrane | 1.93E-03 |
| 19 | GO:0009514: glyoxysome | 2.21E-03 |
| 20 | GO:0005635: nuclear envelope | 3.50E-03 |
| 21 | GO:0005618: cell wall | 4.00E-03 |
| 22 | GO:0005764: lysosome | 4.44E-03 |
| 23 | GO:0045271: respiratory chain complex I | 5.95E-03 |
| 24 | GO:0070469: respiratory chain | 5.95E-03 |
| 25 | GO:0016020: membrane | 7.06E-03 |
| 26 | GO:0005737: cytoplasm | 7.93E-03 |
| 27 | GO:0005770: late endosome | 8.95E-03 |
| 28 | GO:0005886: plasma membrane | 9.06E-03 |
| 29 | GO:0005730: nucleolus | 1.13E-02 |
| 30 | GO:0005643: nuclear pore | 1.62E-02 |
| 31 | GO:0005819: spindle | 2.04E-02 |
| 32 | GO:0005743: mitochondrial inner membrane | 2.12E-02 |
| 33 | GO:0031902: late endosome membrane | 2.17E-02 |
| 34 | GO:0031201: SNARE complex | 2.17E-02 |
| 35 | GO:0031966: mitochondrial membrane | 2.70E-02 |
| 36 | GO:0009536: plastid | 2.73E-02 |
| 37 | GO:0009570: chloroplast stroma | 3.05E-02 |
| 38 | GO:0005747: mitochondrial respiratory chain complex I | 3.28E-02 |
| 39 | GO:0005783: endoplasmic reticulum | 3.39E-02 |
| 40 | GO:0009506: plasmodesma | 4.00E-02 |
| 41 | GO:0009524: phragmoplast | 4.45E-02 |