Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G61580

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042593: glucose homeostasis0.00E+00
2GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
3GO:0097164: ammonium ion metabolic process0.00E+00
4GO:0000038: very long-chain fatty acid metabolic process5.30E-07
5GO:0006633: fatty acid biosynthetic process6.43E-07
6GO:0010444: guard mother cell differentiation1.45E-05
7GO:0009932: cell tip growth2.48E-05
8GO:0043069: negative regulation of programmed cell death4.63E-05
9GO:0010442: guard cell morphogenesis5.03E-05
10GO:0043007: maintenance of rDNA5.03E-05
11GO:0046520: sphingoid biosynthetic process5.03E-05
12GO:0006833: water transport1.11E-04
13GO:0070981: L-asparagine biosynthetic process1.23E-04
14GO:0006529: asparagine biosynthetic process1.23E-04
15GO:0052541: plant-type cell wall cellulose metabolic process1.23E-04
16GO:0060919: auxin influx1.23E-04
17GO:0015840: urea transport2.11E-04
18GO:0042335: cuticle development2.41E-04
19GO:0009860: pollen tube growth6.42E-04
20GO:0007035: vacuolar acidification6.44E-04
21GO:0007049: cell cycle6.71E-04
22GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity7.68E-04
23GO:0030497: fatty acid elongation8.97E-04
24GO:0000902: cell morphogenesis1.32E-03
25GO:0006535: cysteine biosynthetic process from serine1.63E-03
26GO:0048829: root cap development1.63E-03
27GO:0048765: root hair cell differentiation1.79E-03
28GO:0051726: regulation of cell cycle1.90E-03
29GO:0050826: response to freezing2.14E-03
30GO:0009725: response to hormone2.14E-03
31GO:0009735: response to cytokinin2.26E-03
32GO:0010207: photosystem II assembly2.32E-03
33GO:0006541: glutamine metabolic process2.32E-03
34GO:0010030: positive regulation of seed germination2.50E-03
35GO:0010053: root epidermal cell differentiation2.50E-03
36GO:0009416: response to light stimulus2.53E-03
37GO:0010025: wax biosynthetic process2.69E-03
38GO:0006071: glycerol metabolic process2.69E-03
39GO:0019762: glucosinolate catabolic process2.69E-03
40GO:0051301: cell division2.82E-03
41GO:0019344: cysteine biosynthetic process2.88E-03
42GO:0010026: trichome differentiation3.08E-03
43GO:0007017: microtubule-based process3.08E-03
44GO:0003333: amino acid transmembrane transport3.29E-03
45GO:0015992: proton transport3.29E-03
46GO:0055085: transmembrane transport3.42E-03
47GO:0035428: hexose transmembrane transport3.50E-03
48GO:0009831: plant-type cell wall modification involved in multidimensional cell growth3.71E-03
49GO:0042127: regulation of cell proliferation3.93E-03
50GO:0034220: ion transmembrane transport4.37E-03
51GO:0000226: microtubule cytoskeleton organization4.37E-03
52GO:0046323: glucose import4.60E-03
53GO:0009646: response to absence of light4.83E-03
54GO:0007264: small GTPase mediated signal transduction5.56E-03
55GO:0009414: response to water deprivation5.99E-03
56GO:0009828: plant-type cell wall loosening6.07E-03
57GO:0009567: double fertilization forming a zygote and endosperm6.07E-03
58GO:0051607: defense response to virus6.59E-03
59GO:0016126: sterol biosynthetic process6.85E-03
60GO:0045454: cell redox homeostasis7.00E-03
61GO:0042128: nitrate assimilation7.40E-03
62GO:0010411: xyloglucan metabolic process7.68E-03
63GO:0000160: phosphorelay signal transduction system8.53E-03
64GO:0010311: lateral root formation8.53E-03
65GO:0009834: plant-type secondary cell wall biogenesis8.82E-03
66GO:0010119: regulation of stomatal movement9.12E-03
67GO:0007568: aging9.12E-03
68GO:0006865: amino acid transport9.42E-03
69GO:0006810: transport1.01E-02
70GO:0006631: fatty acid metabolic process1.10E-02
71GO:0009926: auxin polar transport1.16E-02
72GO:0009640: photomorphogenesis1.16E-02
73GO:0042546: cell wall biogenesis1.20E-02
74GO:0008643: carbohydrate transport1.23E-02
75GO:0009664: plant-type cell wall organization1.37E-02
76GO:0042538: hyperosmotic salinity response1.37E-02
77GO:0009736: cytokinin-activated signaling pathway1.44E-02
78GO:0006857: oligopeptide transport1.51E-02
79GO:0048316: seed development1.65E-02
80GO:0009740: gibberellic acid mediated signaling pathway1.77E-02
81GO:0009845: seed germination2.29E-02
82GO:0042744: hydrogen peroxide catabolic process2.37E-02
83GO:0009651: response to salt stress2.86E-02
84GO:0009739: response to gibberellin2.95E-02
85GO:0007166: cell surface receptor signaling pathway2.99E-02
86GO:0055114: oxidation-reduction process3.05E-02
87GO:0071555: cell wall organization3.12E-02
88GO:0009826: unidimensional cell growth3.61E-02
89GO:0009409: response to cold4.21E-02
90GO:0046686: response to cadmium ion4.83E-02
91GO:0045892: negative regulation of transcription, DNA-templated4.97E-02
RankGO TermAdjusted P value
1GO:0080132: fatty acid alpha-hydroxylase activity0.00E+00
2GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.66E-06
3GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.66E-06
4GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.66E-06
5GO:0015200: methylammonium transmembrane transporter activity5.03E-05
6GO:0000170: sphingosine hydroxylase activity5.03E-05
7GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity5.03E-05
8GO:0004071: aspartate-ammonia ligase activity5.03E-05
9GO:0042284: sphingolipid delta-4 desaturase activity1.23E-04
10GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity1.23E-04
11GO:0005528: FK506 binding1.25E-04
12GO:0004148: dihydrolipoyl dehydrogenase activity2.11E-04
13GO:0015204: urea transmembrane transporter activity4.15E-04
14GO:0010328: auxin influx transmembrane transporter activity4.15E-04
15GO:0004506: squalene monooxygenase activity4.15E-04
16GO:0015250: water channel activity4.65E-04
17GO:0009922: fatty acid elongase activity5.26E-04
18GO:0008519: ammonium transmembrane transporter activity6.44E-04
19GO:0004693: cyclin-dependent protein serine/threonine kinase activity6.61E-04
20GO:0051753: mannan synthase activity7.68E-04
21GO:0004124: cysteine synthase activity7.68E-04
22GO:0015293: symporter activity1.07E-03
23GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.11E-03
24GO:0008889: glycerophosphodiester phosphodiesterase activity1.32E-03
25GO:0005215: transporter activity1.35E-03
26GO:0046961: proton-transporting ATPase activity, rotational mechanism1.79E-03
27GO:0008794: arsenate reductase (glutaredoxin) activity1.79E-03
28GO:0015144: carbohydrate transmembrane transporter activity2.67E-03
29GO:0005351: sugar:proton symporter activity3.00E-03
30GO:0008514: organic anion transmembrane transporter activity3.93E-03
31GO:0005355: glucose transmembrane transporter activity4.83E-03
32GO:0019901: protein kinase binding5.07E-03
33GO:0016762: xyloglucan:xyloglucosyl transferase activity5.32E-03
34GO:0000156: phosphorelay response regulator activity5.81E-03
35GO:0005506: iron ion binding6.06E-03
36GO:0005200: structural constituent of cytoskeleton6.33E-03
37GO:0016722: oxidoreductase activity, oxidizing metal ions6.33E-03
38GO:0016597: amino acid binding6.59E-03
39GO:0003824: catalytic activity6.95E-03
40GO:0016798: hydrolase activity, acting on glycosyl bonds7.68E-03
41GO:0102483: scopolin beta-glucosidase activity7.68E-03
42GO:0003924: GTPase activity8.64E-03
43GO:0016491: oxidoreductase activity8.76E-03
44GO:0008422: beta-glucosidase activity1.03E-02
45GO:0051537: 2 iron, 2 sulfur cluster binding1.23E-02
46GO:0015171: amino acid transmembrane transporter activity1.54E-02
47GO:0004650: polygalacturonase activity1.73E-02
48GO:0015035: protein disulfide oxidoreductase activity1.88E-02
49GO:0016746: transferase activity, transferring acyl groups1.88E-02
50GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.03E-02
51GO:0030170: pyridoxal phosphate binding2.33E-02
52GO:0005525: GTP binding2.53E-02
53GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.59E-02
54GO:0004601: peroxidase activity3.71E-02
55GO:0016788: hydrolase activity, acting on ester bonds3.76E-02
56GO:0050660: flavin adenine dinucleotide binding4.12E-02
57GO:0046983: protein dimerization activity4.15E-02
58GO:0052689: carboxylic ester hydrolase activity4.64E-02
RankGO TermAdjusted P value
1GO:0031225: anchored component of membrane1.13E-05
2GO:0005886: plasma membrane1.70E-04
3GO:0009509: chromoplast2.11E-04
4GO:0009505: plant-type cell wall3.08E-04
5GO:0016021: integral component of membrane4.16E-04
6GO:0046658: anchored component of plasma membrane4.81E-04
7GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain5.26E-04
8GO:0005618: cell wall5.70E-04
9GO:0042807: central vacuole8.97E-04
10GO:0000326: protein storage vacuole1.17E-03
11GO:0005576: extracellular region1.24E-03
12GO:0045298: tubulin complex1.32E-03
13GO:0005789: endoplasmic reticulum membrane2.21E-03
14GO:0009543: chloroplast thylakoid lumen2.24E-03
15GO:0009705: plant-type vacuole membrane3.07E-03
16GO:0009941: chloroplast envelope3.17E-03
17GO:0005794: Golgi apparatus3.64E-03
18GO:0005783: endoplasmic reticulum6.33E-03
19GO:0005774: vacuolar membrane7.63E-03
20GO:0048046: apoplast8.22E-03
21GO:0031977: thylakoid lumen1.10E-02
22GO:0005887: integral component of plasma membrane1.17E-02
23GO:0005773: vacuole1.46E-02
24GO:0016020: membrane1.50E-02
25GO:0009706: chloroplast inner membrane1.84E-02
26GO:0009506: plasmodesma1.91E-02
27GO:0005874: microtubule4.22E-02
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Gene type



Gene DE type