GO Enrichment Analysis of Co-expressed Genes with
AT3G61080
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 2 | GO:0033614: chloroplast proton-transporting ATP synthase complex assembly | 0.00E+00 |
| 3 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 4 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
| 5 | GO:0099131: ATP hydrolysis coupled ion transmembrane transport | 0.00E+00 |
| 6 | GO:0010480: microsporocyte differentiation | 0.00E+00 |
| 7 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
| 8 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 9 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 10 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 11 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 12 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 13 | GO:2000605: positive regulation of secondary growth | 0.00E+00 |
| 14 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.76E-05 |
| 15 | GO:0051639: actin filament network formation | 2.76E-05 |
| 16 | GO:0051764: actin crosslink formation | 4.98E-05 |
| 17 | GO:0009913: epidermal cell differentiation | 1.15E-04 |
| 18 | GO:0048437: floral organ development | 2.07E-04 |
| 19 | GO:0008610: lipid biosynthetic process | 2.62E-04 |
| 20 | GO:0043266: regulation of potassium ion transport | 2.72E-04 |
| 21 | GO:0031338: regulation of vesicle fusion | 2.72E-04 |
| 22 | GO:0000481: maturation of 5S rRNA | 2.72E-04 |
| 23 | GO:0043087: regulation of GTPase activity | 2.72E-04 |
| 24 | GO:2000021: regulation of ion homeostasis | 2.72E-04 |
| 25 | GO:0010028: xanthophyll cycle | 2.72E-04 |
| 26 | GO:0034337: RNA folding | 2.72E-04 |
| 27 | GO:0010206: photosystem II repair | 3.90E-04 |
| 28 | GO:1900871: chloroplast mRNA modification | 5.99E-04 |
| 29 | GO:0016122: xanthophyll metabolic process | 5.99E-04 |
| 30 | GO:0051262: protein tetramerization | 5.99E-04 |
| 31 | GO:0048229: gametophyte development | 6.22E-04 |
| 32 | GO:0005983: starch catabolic process | 7.11E-04 |
| 33 | GO:0010075: regulation of meristem growth | 8.06E-04 |
| 34 | GO:0009767: photosynthetic electron transport chain | 8.06E-04 |
| 35 | GO:0009934: regulation of meristem structural organization | 9.06E-04 |
| 36 | GO:0000280: nuclear division | 9.72E-04 |
| 37 | GO:0006518: peptide metabolic process | 9.72E-04 |
| 38 | GO:0090630: activation of GTPase activity | 9.72E-04 |
| 39 | GO:0071398: cellular response to fatty acid | 9.72E-04 |
| 40 | GO:2001295: malonyl-CoA biosynthetic process | 9.72E-04 |
| 41 | GO:0051017: actin filament bundle assembly | 1.24E-03 |
| 42 | GO:1901332: negative regulation of lateral root development | 1.39E-03 |
| 43 | GO:0043572: plastid fission | 1.39E-03 |
| 44 | GO:0055070: copper ion homeostasis | 1.39E-03 |
| 45 | GO:0007231: osmosensory signaling pathway | 1.39E-03 |
| 46 | GO:0051016: barbed-end actin filament capping | 1.39E-03 |
| 47 | GO:0008152: metabolic process | 1.60E-03 |
| 48 | GO:0015846: polyamine transport | 1.86E-03 |
| 49 | GO:0033500: carbohydrate homeostasis | 1.86E-03 |
| 50 | GO:0031122: cytoplasmic microtubule organization | 1.86E-03 |
| 51 | GO:0006546: glycine catabolic process | 1.86E-03 |
| 52 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 1.86E-03 |
| 53 | GO:0010021: amylopectin biosynthetic process | 1.86E-03 |
| 54 | GO:0045727: positive regulation of translation | 1.86E-03 |
| 55 | GO:0015994: chlorophyll metabolic process | 1.86E-03 |
| 56 | GO:0048653: anther development | 2.27E-03 |
| 57 | GO:0048497: maintenance of floral organ identity | 2.37E-03 |
| 58 | GO:0035434: copper ion transmembrane transport | 2.37E-03 |
| 59 | GO:0016120: carotene biosynthetic process | 2.37E-03 |
| 60 | GO:0048825: cotyledon development | 2.82E-03 |
| 61 | GO:0006655: phosphatidylglycerol biosynthetic process | 2.93E-03 |
| 62 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 2.93E-03 |
| 63 | GO:0006751: glutathione catabolic process | 2.93E-03 |
| 64 | GO:0042549: photosystem II stabilization | 2.93E-03 |
| 65 | GO:0010256: endomembrane system organization | 2.93E-03 |
| 66 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.93E-03 |
| 67 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 2.93E-03 |
| 68 | GO:0055114: oxidation-reduction process | 3.01E-03 |
| 69 | GO:1901657: glycosyl compound metabolic process | 3.43E-03 |
| 70 | GO:0098869: cellular oxidant detoxification | 4.15E-03 |
| 71 | GO:0051693: actin filament capping | 4.15E-03 |
| 72 | GO:0010196: nonphotochemical quenching | 4.15E-03 |
| 73 | GO:0016126: sterol biosynthetic process | 4.36E-03 |
| 74 | GO:0030091: protein repair | 4.82E-03 |
| 75 | GO:0032508: DNA duplex unwinding | 4.82E-03 |
| 76 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 4.82E-03 |
| 77 | GO:0006633: fatty acid biosynthetic process | 5.48E-03 |
| 78 | GO:0032544: plastid translation | 5.52E-03 |
| 79 | GO:0071482: cellular response to light stimulus | 5.52E-03 |
| 80 | GO:0015996: chlorophyll catabolic process | 5.52E-03 |
| 81 | GO:0000902: cell morphogenesis | 6.25E-03 |
| 82 | GO:0006779: porphyrin-containing compound biosynthetic process | 7.03E-03 |
| 83 | GO:1900865: chloroplast RNA modification | 7.03E-03 |
| 84 | GO:0045036: protein targeting to chloroplast | 7.82E-03 |
| 85 | GO:0006782: protoporphyrinogen IX biosynthetic process | 7.82E-03 |
| 86 | GO:0019538: protein metabolic process | 7.82E-03 |
| 87 | GO:0009807: lignan biosynthetic process | 8.66E-03 |
| 88 | GO:1903507: negative regulation of nucleic acid-templated transcription | 8.66E-03 |
| 89 | GO:0046856: phosphatidylinositol dephosphorylation | 8.66E-03 |
| 90 | GO:0006816: calcium ion transport | 8.66E-03 |
| 91 | GO:0009773: photosynthetic electron transport in photosystem I | 8.66E-03 |
| 92 | GO:0005975: carbohydrate metabolic process | 8.86E-03 |
| 93 | GO:0006820: anion transport | 9.52E-03 |
| 94 | GO:0016024: CDP-diacylglycerol biosynthetic process | 9.52E-03 |
| 95 | GO:0030036: actin cytoskeleton organization | 1.04E-02 |
| 96 | GO:0018107: peptidyl-threonine phosphorylation | 1.04E-02 |
| 97 | GO:0010102: lateral root morphogenesis | 1.04E-02 |
| 98 | GO:0007015: actin filament organization | 1.13E-02 |
| 99 | GO:0010020: chloroplast fission | 1.13E-02 |
| 100 | GO:0070588: calcium ion transmembrane transport | 1.23E-02 |
| 101 | GO:0006364: rRNA processing | 1.26E-02 |
| 102 | GO:0007010: cytoskeleton organization | 1.43E-02 |
| 103 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.48E-02 |
| 104 | GO:0008299: isoprenoid biosynthetic process | 1.53E-02 |
| 105 | GO:0016575: histone deacetylation | 1.53E-02 |
| 106 | GO:0061077: chaperone-mediated protein folding | 1.64E-02 |
| 107 | GO:0035428: hexose transmembrane transport | 1.75E-02 |
| 108 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.75E-02 |
| 109 | GO:0045454: cell redox homeostasis | 1.78E-02 |
| 110 | GO:0018105: peptidyl-serine phosphorylation | 1.85E-02 |
| 111 | GO:0009693: ethylene biosynthetic process | 1.86E-02 |
| 112 | GO:0032259: methylation | 2.20E-02 |
| 113 | GO:0016042: lipid catabolic process | 2.24E-02 |
| 114 | GO:0006662: glycerol ether metabolic process | 2.33E-02 |
| 115 | GO:0046323: glucose import | 2.33E-02 |
| 116 | GO:0009845: seed germination | 2.43E-02 |
| 117 | GO:0042744: hydrogen peroxide catabolic process | 2.56E-02 |
| 118 | GO:0019252: starch biosynthetic process | 2.58E-02 |
| 119 | GO:0009791: post-embryonic development | 2.58E-02 |
| 120 | GO:0080156: mitochondrial mRNA modification | 2.71E-02 |
| 121 | GO:0030163: protein catabolic process | 2.97E-02 |
| 122 | GO:0007623: circadian rhythm | 3.10E-02 |
| 123 | GO:0010027: thylakoid membrane organization | 3.52E-02 |
| 124 | GO:0009816: defense response to bacterium, incompatible interaction | 3.66E-02 |
| 125 | GO:0015995: chlorophyll biosynthetic process | 3.95E-02 |
| 126 | GO:0009817: defense response to fungus, incompatible interaction | 4.25E-02 |
| 127 | GO:0010311: lateral root formation | 4.40E-02 |
| 128 | GO:0009658: chloroplast organization | 4.78E-02 |
| 129 | GO:0006865: amino acid transport | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 2 | GO:0019808: polyamine binding | 0.00E+00 |
| 3 | GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity | 0.00E+00 |
| 4 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 5 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 6 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 7 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 8 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 9 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 10 | GO:0009011: starch synthase activity | 4.98E-05 |
| 11 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 4.98E-05 |
| 12 | GO:0005528: FK506 binding | 8.91E-05 |
| 13 | GO:0004856: xylulokinase activity | 2.72E-04 |
| 14 | GO:0008568: microtubule-severing ATPase activity | 2.72E-04 |
| 15 | GO:0019203: carbohydrate phosphatase activity | 2.72E-04 |
| 16 | GO:0034256: chlorophyll(ide) b reductase activity | 2.72E-04 |
| 17 | GO:0004163: diphosphomevalonate decarboxylase activity | 2.72E-04 |
| 18 | GO:0030941: chloroplast targeting sequence binding | 2.72E-04 |
| 19 | GO:0050139: nicotinate-N-glucosyltransferase activity | 2.72E-04 |
| 20 | GO:0005227: calcium activated cation channel activity | 2.72E-04 |
| 21 | GO:0050308: sugar-phosphatase activity | 2.72E-04 |
| 22 | GO:0003867: 4-aminobutyrate transaminase activity | 2.72E-04 |
| 23 | GO:0051015: actin filament binding | 3.84E-04 |
| 24 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 5.99E-04 |
| 25 | GO:0010283: pinoresinol reductase activity | 5.99E-04 |
| 26 | GO:0016868: intramolecular transferase activity, phosphotransferases | 5.99E-04 |
| 27 | GO:0003839: gamma-glutamylcyclotransferase activity | 5.99E-04 |
| 28 | GO:0004047: aminomethyltransferase activity | 5.99E-04 |
| 29 | GO:0033201: alpha-1,4-glucan synthase activity | 5.99E-04 |
| 30 | GO:0016787: hydrolase activity | 7.10E-04 |
| 31 | GO:0004075: biotin carboxylase activity | 9.72E-04 |
| 32 | GO:0030267: glyoxylate reductase (NADP) activity | 9.72E-04 |
| 33 | GO:0070402: NADPH binding | 9.72E-04 |
| 34 | GO:0016531: copper chaperone activity | 9.72E-04 |
| 35 | GO:0004373: glycogen (starch) synthase activity | 9.72E-04 |
| 36 | GO:0019829: cation-transporting ATPase activity | 9.72E-04 |
| 37 | GO:0048487: beta-tubulin binding | 1.39E-03 |
| 38 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 1.39E-03 |
| 39 | GO:0019201: nucleotide kinase activity | 1.39E-03 |
| 40 | GO:0004445: inositol-polyphosphate 5-phosphatase activity | 1.39E-03 |
| 41 | GO:0033612: receptor serine/threonine kinase binding | 1.50E-03 |
| 42 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.64E-03 |
| 43 | GO:0016836: hydro-lyase activity | 1.86E-03 |
| 44 | GO:0051861: glycolipid binding | 1.86E-03 |
| 45 | GO:0004506: squalene monooxygenase activity | 1.86E-03 |
| 46 | GO:0016491: oxidoreductase activity | 2.13E-03 |
| 47 | GO:0017137: Rab GTPase binding | 2.37E-03 |
| 48 | GO:0003989: acetyl-CoA carboxylase activity | 2.37E-03 |
| 49 | GO:0008381: mechanically-gated ion channel activity | 2.37E-03 |
| 50 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.37E-03 |
| 51 | GO:0042578: phosphoric ester hydrolase activity | 2.93E-03 |
| 52 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 2.93E-03 |
| 53 | GO:0004556: alpha-amylase activity | 2.93E-03 |
| 54 | GO:2001070: starch binding | 2.93E-03 |
| 55 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.93E-03 |
| 56 | GO:0048038: quinone binding | 3.02E-03 |
| 57 | GO:0005261: cation channel activity | 3.52E-03 |
| 58 | GO:0004017: adenylate kinase activity | 3.52E-03 |
| 59 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 3.52E-03 |
| 60 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 3.52E-03 |
| 61 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 3.52E-03 |
| 62 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 3.52E-03 |
| 63 | GO:0015631: tubulin binding | 3.52E-03 |
| 64 | GO:0004620: phospholipase activity | 4.15E-03 |
| 65 | GO:0004033: aldo-keto reductase (NADP) activity | 4.82E-03 |
| 66 | GO:0043022: ribosome binding | 4.82E-03 |
| 67 | GO:0102483: scopolin beta-glucosidase activity | 5.13E-03 |
| 68 | GO:0008236: serine-type peptidase activity | 5.40E-03 |
| 69 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 5.52E-03 |
| 70 | GO:0005375: copper ion transmembrane transporter activity | 5.52E-03 |
| 71 | GO:0005096: GTPase activator activity | 5.97E-03 |
| 72 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 6.25E-03 |
| 73 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 6.25E-03 |
| 74 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 6.25E-03 |
| 75 | GO:0004222: metalloendopeptidase activity | 6.27E-03 |
| 76 | GO:0008422: beta-glucosidase activity | 7.87E-03 |
| 77 | GO:0047372: acylglycerol lipase activity | 8.66E-03 |
| 78 | GO:0015386: potassium:proton antiporter activity | 8.66E-03 |
| 79 | GO:0008289: lipid binding | 9.46E-03 |
| 80 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 9.52E-03 |
| 81 | GO:0043621: protein self-association | 1.01E-02 |
| 82 | GO:0008168: methyltransferase activity | 1.03E-02 |
| 83 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 1.04E-02 |
| 84 | GO:0005262: calcium channel activity | 1.04E-02 |
| 85 | GO:0004565: beta-galactosidase activity | 1.04E-02 |
| 86 | GO:0016788: hydrolase activity, acting on ester bonds | 1.10E-02 |
| 87 | GO:0005509: calcium ion binding | 1.10E-02 |
| 88 | GO:0008266: poly(U) RNA binding | 1.13E-02 |
| 89 | GO:0003714: transcription corepressor activity | 1.43E-02 |
| 90 | GO:0031418: L-ascorbic acid binding | 1.43E-02 |
| 91 | GO:0004407: histone deacetylase activity | 1.43E-02 |
| 92 | GO:0015079: potassium ion transmembrane transporter activity | 1.53E-02 |
| 93 | GO:0052689: carboxylic ester hydrolase activity | 1.61E-02 |
| 94 | GO:0004176: ATP-dependent peptidase activity | 1.64E-02 |
| 95 | GO:0003779: actin binding | 1.74E-02 |
| 96 | GO:0047134: protein-disulfide reductase activity | 2.09E-02 |
| 97 | GO:0005355: glucose transmembrane transporter activity | 2.45E-02 |
| 98 | GO:0050662: coenzyme binding | 2.45E-02 |
| 99 | GO:0004791: thioredoxin-disulfide reductase activity | 2.45E-02 |
| 100 | GO:0016853: isomerase activity | 2.45E-02 |
| 101 | GO:0004252: serine-type endopeptidase activity | 2.50E-02 |
| 102 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.97E-02 |
| 103 | GO:0008237: metallopeptidase activity | 3.24E-02 |
| 104 | GO:0008483: transaminase activity | 3.24E-02 |
| 105 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 3.80E-02 |
| 106 | GO:0004721: phosphoprotein phosphatase activity | 3.95E-02 |
| 107 | GO:0004683: calmodulin-dependent protein kinase activity | 3.95E-02 |
| 108 | GO:0030145: manganese ion binding | 4.71E-02 |
| 109 | GO:0004601: peroxidase activity | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 2 | GO:0042597: periplasmic space | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 4.52E-30 |
| 4 | GO:0009534: chloroplast thylakoid | 9.32E-21 |
| 5 | GO:0009570: chloroplast stroma | 8.29E-17 |
| 6 | GO:0009941: chloroplast envelope | 1.42E-16 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 8.32E-14 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 3.12E-08 |
| 9 | GO:0031977: thylakoid lumen | 1.15E-05 |
| 10 | GO:0032432: actin filament bundle | 2.76E-05 |
| 11 | GO:0005884: actin filament | 2.83E-05 |
| 12 | GO:0009579: thylakoid | 7.57E-05 |
| 13 | GO:0010287: plastoglobule | 9.40E-05 |
| 14 | GO:0009344: nitrite reductase complex [NAD(P)H] | 2.72E-04 |
| 15 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.90E-04 |
| 16 | GO:0008290: F-actin capping protein complex | 5.99E-04 |
| 17 | GO:0031969: chloroplast membrane | 6.85E-04 |
| 18 | GO:0030095: chloroplast photosystem II | 9.06E-04 |
| 19 | GO:0042651: thylakoid membrane | 1.37E-03 |
| 20 | GO:0009654: photosystem II oxygen evolving complex | 1.37E-03 |
| 21 | GO:0019898: extrinsic component of membrane | 2.82E-03 |
| 22 | GO:0031359: integral component of chloroplast outer membrane | 4.15E-03 |
| 23 | GO:0009533: chloroplast stromal thylakoid | 4.15E-03 |
| 24 | GO:0009501: amyloplast | 4.82E-03 |
| 25 | GO:0009538: photosystem I reaction center | 4.82E-03 |
| 26 | GO:0042644: chloroplast nucleoid | 6.25E-03 |
| 27 | GO:0032040: small-subunit processome | 9.52E-03 |
| 28 | GO:0009508: plastid chromosome | 1.04E-02 |
| 29 | GO:0009574: preprophase band | 1.04E-02 |
| 30 | GO:0009706: chloroplast inner membrane | 1.79E-02 |
| 31 | GO:0009536: plastid | 1.80E-02 |
| 32 | GO:0009505: plant-type cell wall | 1.87E-02 |
| 33 | GO:0009705: plant-type vacuole membrane | 3.10E-02 |
| 34 | GO:0009295: nucleoid | 3.24E-02 |
| 35 | GO:0009707: chloroplast outer membrane | 4.25E-02 |