co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G60800

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010111: glyoxysome organization	0.00E+00
2	GO:0046292: formaldehyde metabolic process	0.00E+00
3	GO:0006069: ethanol oxidation	0.00E+00
4	GO:0032780: negative regulation of ATPase activity	0.00E+00
5	GO:0006482: protein demethylation	0.00E+00
6	GO:0051603: proteolysis involved in cellular protein catabolic process	4.33E-07
7	GO:0006624: vacuolar protein processing	3.27E-06
8	GO:0006605: protein targeting	4.08E-05
9	GO:0080173: male-female gamete recognition during double fertilization	8.09E-05
10	GO:0010184: cytokinin transport	8.09E-05
11	GO:0035344: hypoxanthine transport	8.09E-05
12	GO:0098721: uracil import across plasma membrane	8.09E-05
13	GO:0006144: purine nucleobase metabolic process	8.09E-05
14	GO:0098702: adenine import across plasma membrane	8.09E-05
15	GO:0048455: stamen formation	8.09E-05
16	GO:0006772: thiamine metabolic process	8.09E-05
17	GO:0098710: guanine import across plasma membrane	8.09E-05
18	GO:0006805: xenobiotic metabolic process	8.09E-05
19	GO:0019628: urate catabolic process	8.09E-05
20	GO:0019521: D-gluconate metabolic process	1.93E-04
21	GO:0006212: uracil catabolic process	1.93E-04
22	GO:0019374: galactolipid metabolic process	1.93E-04
23	GO:0051788: response to misfolded protein	1.93E-04
24	GO:0080026: response to indolebutyric acid	1.93E-04
25	GO:0019483: beta-alanine biosynthetic process	1.93E-04
26	GO:0019395: fatty acid oxidation	1.93E-04
27	GO:0006597: spermine biosynthetic process	1.93E-04
28	GO:1905182: positive regulation of urease activity	1.93E-04
29	GO:0006508: proteolysis	3.06E-04
30	GO:0080055: low-affinity nitrate transport	3.24E-04
31	GO:0010476: gibberellin mediated signaling pathway	3.24E-04
32	GO:0071494: cellular response to UV-C	3.24E-04
33	GO:0010325: raffinose family oligosaccharide biosynthetic process	3.24E-04
34	GO:0072334: UDP-galactose transmembrane transport	4.66E-04
35	GO:0071786: endoplasmic reticulum tubular network organization	4.66E-04
36	GO:0080024: indolebutyric acid metabolic process	4.66E-04
37	GO:2001289: lipid X metabolic process	4.66E-04
38	GO:0006635: fatty acid beta-oxidation	5.92E-04
39	GO:1902584: positive regulation of response to water deprivation	6.21E-04
40	GO:0010363: regulation of plant-type hypersensitive response	6.21E-04
41	GO:0010222: stem vascular tissue pattern formation	6.21E-04
42	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	6.21E-04
43	GO:0045927: positive regulation of growth	7.86E-04
44	GO:0006564: L-serine biosynthetic process	7.86E-04
45	GO:0009229: thiamine diphosphate biosynthetic process	7.86E-04
46	GO:0006974: cellular response to DNA damage stimulus	9.37E-04
47	GO:0043248: proteasome assembly	9.59E-04
48	GO:0009267: cellular response to starvation	9.59E-04
49	GO:0006596: polyamine biosynthetic process	9.59E-04
50	GO:0006014: D-ribose metabolic process	9.59E-04
51	GO:0006751: glutathione catabolic process	9.59E-04
52	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	9.59E-04
53	GO:0055114: oxidation-reduction process	1.12E-03
54	GO:0034389: lipid particle organization	1.14E-03
55	GO:0009082: branched-chain amino acid biosynthetic process	1.14E-03
56	GO:0009099: valine biosynthetic process	1.14E-03
57	GO:0048444: floral organ morphogenesis	1.14E-03
58	GO:0048767: root hair elongation	1.14E-03
59	GO:0007568: aging	1.25E-03
60	GO:0080186: developmental vegetative growth	1.34E-03
61	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.34E-03
62	GO:0071669: plant-type cell wall organization or biogenesis	1.34E-03
63	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	1.34E-03
64	GO:0050790: regulation of catalytic activity	1.34E-03
65	GO:0006955: immune response	1.34E-03
66	GO:0048528: post-embryonic root development	1.34E-03
67	GO:0006644: phospholipid metabolic process	1.54E-03
68	GO:0009097: isoleucine biosynthetic process	1.76E-03
69	GO:0043562: cellular response to nitrogen levels	1.76E-03
70	GO:0009051: pentose-phosphate shunt, oxidative branch	1.98E-03
71	GO:0006098: pentose-phosphate shunt	1.98E-03
72	GO:0000373: Group II intron splicing	1.98E-03
73	GO:0009056: catabolic process	1.98E-03
74	GO:0090332: stomatal closure	2.22E-03
75	GO:0009098: leucine biosynthetic process	2.22E-03
76	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	2.22E-03
77	GO:0043085: positive regulation of catalytic activity	2.71E-03
78	GO:0015706: nitrate transport	2.97E-03
79	GO:0006807: nitrogen compound metabolic process	3.24E-03
80	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	3.24E-03
81	GO:0006006: glucose metabolic process	3.24E-03
82	GO:0007034: vacuolar transport	3.52E-03
83	GO:0007031: peroxisome organization	3.81E-03
84	GO:0006863: purine nucleobase transport	4.10E-03
85	GO:0009695: jasmonic acid biosynthetic process	4.70E-03
86	GO:0031408: oxylipin biosynthetic process	5.02E-03
87	GO:0010150: leaf senescence	5.69E-03
88	GO:0009611: response to wounding	5.75E-03
89	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	6.35E-03
90	GO:0034220: ion transmembrane transport	6.70E-03
91	GO:0019252: starch biosynthetic process	7.79E-03
92	GO:0010583: response to cyclopentenone	8.56E-03
93	GO:0031047: gene silencing by RNA	8.56E-03
94	GO:0030163: protein catabolic process	8.94E-03
95	GO:1901657: glycosyl compound metabolic process	8.94E-03
96	GO:0010286: heat acclimation	9.75E-03
97	GO:0009723: response to ethylene	1.02E-02
98	GO:0010029: regulation of seed germination	1.10E-02
99	GO:0042128: nitrate assimilation	1.14E-02
100	GO:0008219: cell death	1.27E-02
101	GO:0042742: defense response to bacterium	1.37E-02
102	GO:0010043: response to zinc ion	1.41E-02
103	GO:0006631: fatty acid metabolic process	1.70E-02
104	GO:0009744: response to sucrose	1.80E-02
105	GO:0051707: response to other organism	1.80E-02
106	GO:0000209: protein polyubiquitination	1.86E-02
107	GO:0009636: response to toxic substance	1.96E-02
108	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.07E-02
109	GO:0009809: lignin biosynthetic process	2.23E-02
110	GO:0006857: oligopeptide transport	2.34E-02
111	GO:0048316: seed development	2.57E-02
112	GO:0009626: plant-type hypersensitive response	2.63E-02
113	GO:0016569: covalent chromatin modification	2.75E-02
114	GO:0009738: abscisic acid-activated signaling pathway	2.78E-02
115	GO:0009555: pollen development	2.87E-02
116	GO:0018105: peptidyl-serine phosphorylation	2.93E-02
117	GO:0006511: ubiquitin-dependent protein catabolic process	3.89E-02
118	GO:0040008: regulation of growth	4.09E-02
119	GO:0007623: circadian rhythm	4.23E-02
120	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.58E-02
121	GO:0009739: response to gibberellin	4.58E-02
122	GO:0010468: regulation of gene expression	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0017113: dihydropyrimidine dehydrogenase (NADP+) activity	0.00E+00
2	GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity	0.00E+00
3	GO:0004846: urate oxidase activity	0.00E+00
4	GO:0051723: protein methylesterase activity	0.00E+00
5	GO:0015211: purine nucleoside transmembrane transporter activity	0.00E+00
6	GO:0042030: ATPase inhibitor activity	0.00E+00
7	GO:0080007: S-nitrosoglutathione reductase activity	0.00E+00
8	GO:0004197: cysteine-type endopeptidase activity	6.50E-07
9	GO:0031593: polyubiquitin binding	1.59E-05
10	GO:0015208: guanine transmembrane transporter activity	8.09E-05
11	GO:0004112: cyclic-nucleotide phosphodiesterase activity	8.09E-05
12	GO:0015294: solute:cation symporter activity	8.09E-05
13	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	8.09E-05
14	GO:0004788: thiamine diphosphokinase activity	8.09E-05
15	GO:0015207: adenine transmembrane transporter activity	8.09E-05
16	GO:0016768: spermine synthase activity	8.09E-05
17	GO:0003988: acetyl-CoA C-acyltransferase activity	1.93E-04
18	GO:0010331: gibberellin binding	1.93E-04
19	GO:0004617: phosphoglycerate dehydrogenase activity	1.93E-04
20	GO:0004766: spermidine synthase activity	1.93E-04
21	GO:0005047: signal recognition particle binding	3.24E-04
22	GO:0003840: gamma-glutamyltransferase activity	3.24E-04
23	GO:0036374: glutathione hydrolase activity	3.24E-04
24	GO:0016805: dipeptidase activity	3.24E-04
25	GO:0080054: low-affinity nitrate transmembrane transporter activity	3.24E-04
26	GO:0016151: nickel cation binding	3.24E-04
27	GO:0003924: GTPase activity	4.37E-04
28	GO:0001653: peptide receptor activity	4.66E-04
29	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	4.66E-04
30	GO:0052656: L-isoleucine transaminase activity	4.66E-04
31	GO:0052654: L-leucine transaminase activity	4.66E-04
32	GO:0004300: enoyl-CoA hydratase activity	4.66E-04
33	GO:0052655: L-valine transaminase activity	4.66E-04
34	GO:0015210: uracil transmembrane transporter activity	6.21E-04
35	GO:0004084: branched-chain-amino-acid transaminase activity	6.21E-04
36	GO:0004345: glucose-6-phosphate dehydrogenase activity	6.21E-04
37	GO:0005459: UDP-galactose transmembrane transporter activity	7.86E-04
38	GO:0004747: ribokinase activity	1.14E-03
39	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.14E-03
40	GO:0008235: metalloexopeptidase activity	1.34E-03
41	GO:0004620: phospholipase activity	1.34E-03
42	GO:0008865: fructokinase activity	1.54E-03
43	GO:0052747: sinapyl alcohol dehydrogenase activity	1.54E-03
44	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	1.98E-03
45	GO:0005525: GTP binding	2.20E-03
46	GO:0047617: acyl-CoA hydrolase activity	2.22E-03
47	GO:0008234: cysteine-type peptidase activity	2.58E-03
48	GO:0004177: aminopeptidase activity	2.71E-03
49	GO:0045551: cinnamyl-alcohol dehydrogenase activity	2.97E-03
50	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.24E-03
51	GO:0004022: alcohol dehydrogenase (NAD) activity	3.24E-03
52	GO:0005215: transporter activity	3.52E-03
53	GO:0004175: endopeptidase activity	3.52E-03
54	GO:0008131: primary amine oxidase activity	3.52E-03
55	GO:0031624: ubiquitin conjugating enzyme binding	3.52E-03
56	GO:0016491: oxidoreductase activity	4.59E-03
57	GO:0005345: purine nucleobase transmembrane transporter activity	4.70E-03
58	GO:0004298: threonine-type endopeptidase activity	5.02E-03
59	GO:0001085: RNA polymerase II transcription factor binding	7.06E-03
60	GO:0048038: quinone binding	8.17E-03
61	GO:0016597: amino acid binding	1.02E-02
62	GO:0005515: protein binding	1.03E-02
63	GO:0015250: water channel activity	1.06E-02
64	GO:0051213: dioxygenase activity	1.06E-02
65	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.14E-02
66	GO:0102483: scopolin beta-glucosidase activity	1.19E-02
67	GO:0004683: calmodulin-dependent protein kinase activity	1.19E-02
68	GO:0030145: manganese ion binding	1.41E-02
69	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.41E-02
70	GO:0008422: beta-glucosidase activity	1.60E-02
71	GO:0050661: NADP binding	1.65E-02
72	GO:0005198: structural molecule activity	1.96E-02
73	GO:0015293: symporter activity	1.96E-02
74	GO:0051287: NAD binding	2.07E-02
75	GO:0022857: transmembrane transporter activity	2.75E-02
76	GO:0004386: helicase activity	3.05E-02
77	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.69E-02
78	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.78E-02
79	GO:0005516: calmodulin binding	4.30E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0019822: P4 peroxisome	0.00E+00
3	GO:0005773: vacuole	1.39E-06
4	GO:0005777: peroxisome	2.77E-05
5	GO:0005764: lysosome	1.70E-04
6	GO:0005829: cytosol	1.98E-04
7	GO:0030139: endocytic vesicle	3.24E-04
8	GO:0000323: lytic vacuole	4.66E-04
9	GO:0071782: endoplasmic reticulum tubular network	4.66E-04
10	GO:0030173: integral component of Golgi membrane	1.14E-03
11	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	1.54E-03
12	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.76E-03
13	GO:0005811: lipid particle	1.76E-03
14	GO:0009514: glyoxysome	1.76E-03
15	GO:0005783: endoplasmic reticulum	1.90E-03
16	GO:0008540: proteasome regulatory particle, base subcomplex	2.22E-03
17	GO:0000502: proteasome complex	2.34E-03
18	GO:0005737: cytoplasm	2.84E-03
19	GO:0016602: CCAAT-binding factor complex	3.24E-03
20	GO:0030176: integral component of endoplasmic reticulum membrane	3.81E-03
21	GO:0005623: cell	4.24E-03
22	GO:0005839: proteasome core complex	5.02E-03
23	GO:0005774: vacuolar membrane	5.64E-03
24	GO:0005615: extracellular space	6.36E-03
25	GO:0005778: peroxisomal membrane	9.75E-03
26	GO:0005667: transcription factor complex	1.14E-02
27	GO:0005768: endosome	1.20E-02
28	GO:0000151: ubiquitin ligase complex	1.27E-02
29	GO:0031902: late endosome membrane	1.70E-02
30	GO:0009570: chloroplast stroma	1.70E-02
31	GO:0005887: integral component of plasma membrane	2.20E-02
32	GO:0005635: nuclear envelope	2.34E-02
33	GO:0005789: endoplasmic reticulum membrane	2.34E-02
34	GO:0005654: nucleoplasm	3.30E-02
35	GO:0031225: anchored component of membrane	4.46E-02
36	GO:0005802: trans-Golgi network	4.58E-02
37	GO:0005886: plasma membrane	4.81E-02