Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G60770

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009967: positive regulation of signal transduction0.00E+00
2GO:0044843: cell cycle G1/S phase transition0.00E+00
3GO:0006412: translation1.35E-136
4GO:0042254: ribosome biogenesis1.41E-53
5GO:0000027: ribosomal large subunit assembly2.20E-15
6GO:0009735: response to cytokinin1.16E-07
7GO:0009955: adaxial/abaxial pattern specification5.58E-07
8GO:0002181: cytoplasmic translation4.13E-06
9GO:0042274: ribosomal small subunit biogenesis1.80E-05
10GO:0071215: cellular response to abscisic acid stimulus4.39E-05
11GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.50E-04
12GO:0006407: rRNA export from nucleus1.50E-04
13GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.50E-04
14GO:0009409: response to cold3.35E-04
15GO:0048569: post-embryonic animal organ development3.42E-04
16GO:0006414: translational elongation3.87E-04
17GO:0009965: leaf morphogenesis5.44E-04
18GO:1902626: assembly of large subunit precursor of preribosome5.61E-04
19GO:0010476: gibberellin mediated signaling pathway5.61E-04
20GO:0042256: mature ribosome assembly5.61E-04
21GO:0006364: rRNA processing6.84E-04
22GO:0040007: growth7.93E-04
23GO:0044205: 'de novo' UMP biosynthetic process1.06E-03
24GO:0009793: embryo development ending in seed dormancy1.11E-03
25GO:0071493: cellular response to UV-B1.35E-03
26GO:0009845: seed germination1.54E-03
27GO:0000470: maturation of LSU-rRNA1.65E-03
28GO:0000911: cytokinesis by cell plate formation1.98E-03
29GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process2.33E-03
30GO:0000028: ribosomal small subunit assembly2.70E-03
31GO:0001558: regulation of cell growth3.08E-03
32GO:0006526: arginine biosynthetic process3.08E-03
33GO:0008283: cell proliferation3.98E-03
34GO:0009644: response to high light intensity4.30E-03
35GO:0006913: nucleocytoplasmic transport4.80E-03
36GO:0010015: root morphogenesis4.80E-03
37GO:0006820: anion transport5.27E-03
38GO:0010102: lateral root morphogenesis5.75E-03
39GO:0006626: protein targeting to mitochondrion5.75E-03
40GO:0010229: inflorescence development5.75E-03
41GO:0006417: regulation of translation5.92E-03
42GO:0006541: glutamine metabolic process6.25E-03
43GO:0048367: shoot system development6.53E-03
44GO:0030150: protein import into mitochondrial matrix7.84E-03
45GO:0051302: regulation of cell division8.40E-03
46GO:0009791: post-embryonic development1.41E-02
47GO:0009749: response to glucose1.41E-02
48GO:0032502: developmental process1.55E-02
49GO:0010090: trichome morphogenesis1.62E-02
50GO:0006811: ion transport2.48E-02
51GO:0010043: response to zinc ion2.56E-02
52GO:0048364: root development3.90E-02
53GO:0009620: response to fungus4.88E-02
RankGO TermAdjusted P value
1GO:0005078: MAP-kinase scaffold activity0.00E+00
2GO:0003735: structural constituent of ribosome5.96E-170
3GO:0003729: mRNA binding7.23E-42
4GO:0019843: rRNA binding1.55E-14
5GO:0008097: 5S rRNA binding9.63E-06
6GO:0004088: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity1.50E-04
7GO:0032947: protein complex scaffold5.61E-04
8GO:0070181: small ribosomal subunit rRNA binding5.61E-04
9GO:0008235: metalloexopeptidase activity2.33E-03
10GO:0015288: porin activity2.70E-03
11GO:0008308: voltage-gated anion channel activity3.08E-03
12GO:0015266: protein channel activity5.75E-03
13GO:0003723: RNA binding5.80E-03
14GO:0004871: signal transducer activity6.39E-03
15GO:0000166: nucleotide binding1.63E-02
16GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity2.31E-02
17GO:0003746: translation elongation factor activity2.74E-02
RankGO TermAdjusted P value
1GO:0022626: cytosolic ribosome7.24E-130
2GO:0022625: cytosolic large ribosomal subunit2.60E-105
3GO:0005840: ribosome3.20E-100
4GO:0022627: cytosolic small ribosomal subunit2.02E-59
5GO:0005737: cytoplasm5.07E-43
6GO:0005730: nucleolus1.57E-42
7GO:0005829: cytosol6.43E-39
8GO:0009506: plasmodesma9.14E-31
9GO:0015934: large ribosomal subunit7.89E-24
10GO:0005774: vacuolar membrane1.58E-20
11GO:0016020: membrane2.76E-19
12GO:0015935: small ribosomal subunit8.29E-13
13GO:0005773: vacuole7.01E-12
14GO:0005618: cell wall7.34E-10
15GO:0005886: plasma membrane8.58E-10
16GO:0009507: chloroplast5.08E-06
17GO:0005951: carbamoyl-phosphate synthase complex1.50E-04
18GO:0030686: 90S preribosome1.50E-04
19GO:0005853: eukaryotic translation elongation factor 1 complex5.61E-04
20GO:0005742: mitochondrial outer membrane translocase complex3.08E-03
21GO:0046930: pore complex3.08E-03
22GO:0005834: heterotrimeric G-protein complex6.74E-03
23GO:0005622: intracellular8.93E-03
24GO:0005741: mitochondrial outer membrane8.97E-03
25GO:0030529: intracellular ribonucleoprotein complex1.92E-02
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Gene type



Gene DE type