co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G60450

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation	0.00E+00
2	GO:0006721: terpenoid metabolic process	0.00E+00
3	GO:0019307: mannose biosynthetic process	0.00E+00
4	GO:0051553: flavone biosynthetic process	0.00E+00
5	GO:0072722: response to amitrole	0.00E+00
6	GO:0006042: glucosamine biosynthetic process	0.00E+00
7	GO:1901137: carbohydrate derivative biosynthetic process	0.00E+00
8	GO:1902001: fatty acid transmembrane transport	0.00E+00
9	GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	0.00E+00
10	GO:0045047: protein targeting to ER	0.00E+00
11	GO:0002376: immune system process	0.00E+00
12	GO:0006457: protein folding	2.06E-09
13	GO:0046686: response to cadmium ion	2.99E-09
14	GO:0034976: response to endoplasmic reticulum stress	1.29E-08
15	GO:0009627: systemic acquired resistance	2.34E-08
16	GO:0030968: endoplasmic reticulum unfolded protein response	4.41E-06
17	GO:0045454: cell redox homeostasis	7.59E-06
18	GO:0042742: defense response to bacterium	1.77E-05
19	GO:0018279: protein N-linked glycosylation via asparagine	4.91E-05
20	GO:0009651: response to salt stress	6.06E-05
21	GO:0016998: cell wall macromolecule catabolic process	6.47E-05
22	GO:0010150: leaf senescence	8.70E-05
23	GO:0009414: response to water deprivation	9.71E-05
24	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.00E-04
25	GO:0006979: response to oxidative stress	1.07E-04
26	GO:0006605: protein targeting	1.70E-04
27	GO:0042964: thioredoxin reduction	2.04E-04
28	GO:0010266: response to vitamin B1	2.04E-04
29	GO:0019276: UDP-N-acetylgalactosamine metabolic process	2.04E-04
30	GO:0006047: UDP-N-acetylglucosamine metabolic process	2.04E-04
31	GO:0016487: farnesol metabolic process	2.04E-04
32	GO:0006422: aspartyl-tRNA aminoacylation	2.04E-04
33	GO:0009700: indole phytoalexin biosynthetic process	2.04E-04
34	GO:0043687: post-translational protein modification	2.04E-04
35	GO:0010230: alternative respiration	2.04E-04
36	GO:0009553: embryo sac development	2.53E-04
37	GO:0046685: response to arsenic-containing substance	2.57E-04
38	GO:0006032: chitin catabolic process	3.60E-04
39	GO:0030003: cellular cation homeostasis	4.57E-04
40	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	4.57E-04
41	GO:0071668: plant-type cell wall assembly	4.57E-04
42	GO:0031204: posttranslational protein targeting to membrane, translocation	4.57E-04
43	GO:0055088: lipid homeostasis	4.57E-04
44	GO:0015908: fatty acid transport	4.57E-04
45	GO:0031349: positive regulation of defense response	4.57E-04
46	GO:0006099: tricarboxylic acid cycle	6.22E-04
47	GO:0055074: calcium ion homeostasis	7.44E-04
48	GO:0072661: protein targeting to plasma membrane	7.44E-04
49	GO:0006011: UDP-glucose metabolic process	7.44E-04
50	GO:0010272: response to silver ion	7.44E-04
51	GO:0006421: asparaginyl-tRNA aminoacylation	7.44E-04
52	GO:0006013: mannose metabolic process	7.44E-04
53	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	7.44E-04
54	GO:0006954: inflammatory response	7.44E-04
55	GO:0002230: positive regulation of defense response to virus by host	7.44E-04
56	GO:0000162: tryptophan biosynthetic process	7.58E-04
57	GO:0009617: response to bacterium	8.23E-04
58	GO:1902290: positive regulation of defense response to oomycetes	1.06E-03
59	GO:0000187: activation of MAPK activity	1.06E-03
60	GO:0009298: GDP-mannose biosynthetic process	1.06E-03
61	GO:0002239: response to oomycetes	1.06E-03
62	GO:0072334: UDP-galactose transmembrane transport	1.06E-03
63	GO:0033014: tetrapyrrole biosynthetic process	1.06E-03
64	GO:0015700: arsenite transport	1.06E-03
65	GO:0030433: ubiquitin-dependent ERAD pathway	1.10E-03
66	GO:0009625: response to insect	1.20E-03
67	GO:0009306: protein secretion	1.30E-03
68	GO:0000956: nuclear-transcribed mRNA catabolic process	1.41E-03
69	GO:0005513: detection of calcium ion	1.80E-03
70	GO:0045116: protein neddylation	1.80E-03
71	GO:0009697: salicylic acid biosynthetic process	1.80E-03
72	GO:0000302: response to reactive oxygen species	2.01E-03
73	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	2.21E-03
74	GO:0060918: auxin transport	2.21E-03
75	GO:0047484: regulation of response to osmotic stress	2.21E-03
76	GO:0030163: protein catabolic process	2.28E-03
77	GO:0042372: phylloquinone biosynthetic process	2.66E-03
78	GO:0006952: defense response	2.77E-03
79	GO:0009615: response to virus	2.89E-03
80	GO:0009409: response to cold	3.11E-03
81	GO:1900057: positive regulation of leaf senescence	3.13E-03
82	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	3.13E-03
83	GO:0016049: cell growth	3.58E-03
84	GO:0031540: regulation of anthocyanin biosynthetic process	3.63E-03
85	GO:0006102: isocitrate metabolic process	3.63E-03
86	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.63E-03
87	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.63E-03
88	GO:0030091: protein repair	3.63E-03
89	GO:0009813: flavonoid biosynthetic process	3.95E-03
90	GO:0010120: camalexin biosynthetic process	4.15E-03
91	GO:0010208: pollen wall assembly	4.15E-03
92	GO:0009699: phenylpropanoid biosynthetic process	4.15E-03
93	GO:0019430: removal of superoxide radicals	4.15E-03
94	GO:0010497: plasmodesmata-mediated intercellular transport	4.15E-03
95	GO:0006783: heme biosynthetic process	4.70E-03
96	GO:0010112: regulation of systemic acquired resistance	4.70E-03
97	GO:0015780: nucleotide-sugar transport	4.70E-03
98	GO:0050832: defense response to fungus	5.02E-03
99	GO:1900426: positive regulation of defense response to bacterium	5.27E-03
100	GO:0010205: photoinhibition	5.27E-03
101	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.27E-03
102	GO:2000280: regulation of root development	5.27E-03
103	GO:0010215: cellulose microfibril organization	5.86E-03
104	GO:0051707: response to other organism	6.13E-03
105	GO:0009735: response to cytokinin	6.34E-03
106	GO:0000272: polysaccharide catabolic process	6.48E-03
107	GO:0006816: calcium ion transport	6.48E-03
108	GO:0052544: defense response by callose deposition in cell wall	6.48E-03
109	GO:0009089: lysine biosynthetic process via diaminopimelate	6.48E-03
110	GO:0009555: pollen development	7.27E-03
111	GO:0031347: regulation of defense response	7.43E-03
112	GO:0009846: pollen germination	7.70E-03
113	GO:0010075: regulation of meristem growth	7.78E-03
114	GO:0009934: regulation of meristem structural organization	8.47E-03
115	GO:0006541: glutamine metabolic process	8.47E-03
116	GO:0010200: response to chitin	8.72E-03
117	GO:0019853: L-ascorbic acid biosynthetic process	9.17E-03
118	GO:0015031: protein transport	9.31E-03
119	GO:0006487: protein N-linked glycosylation	1.06E-02
120	GO:0080147: root hair cell development	1.06E-02
121	GO:0006886: intracellular protein transport	1.09E-02
122	GO:0006874: cellular calcium ion homeostasis	1.14E-02
123	GO:0055114: oxidation-reduction process	1.18E-02
124	GO:0031348: negative regulation of defense response	1.30E-02
125	GO:0071456: cellular response to hypoxia	1.30E-02
126	GO:0009814: defense response, incompatible interaction	1.30E-02
127	GO:0007131: reciprocal meiotic recombination	1.30E-02
128	GO:0019722: calcium-mediated signaling	1.47E-02
129	GO:0006508: proteolysis	1.54E-02
130	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.55E-02
131	GO:0006468: protein phosphorylation	1.59E-02
132	GO:0000413: protein peptidyl-prolyl isomerization	1.64E-02
133	GO:0010051: xylem and phloem pattern formation	1.64E-02
134	GO:0010118: stomatal movement	1.64E-02
135	GO:0042631: cellular response to water deprivation	1.64E-02
136	GO:0010197: polar nucleus fusion	1.73E-02
137	GO:0048868: pollen tube development	1.73E-02
138	GO:0009646: response to absence of light	1.82E-02
139	GO:0009851: auxin biosynthetic process	1.92E-02
140	GO:0010193: response to ozone	2.01E-02
141	GO:0002229: defense response to oomycetes	2.01E-02
142	GO:0009630: gravitropism	2.11E-02
143	GO:0009737: response to abscisic acid	2.26E-02
144	GO:0009567: double fertilization forming a zygote and endosperm	2.30E-02
145	GO:0010252: auxin homeostasis	2.30E-02
146	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.72E-02
147	GO:0009816: defense response to bacterium, incompatible interaction	2.72E-02
148	GO:0006906: vesicle fusion	2.83E-02
149	GO:0006950: response to stress	2.94E-02
150	GO:0015995: chlorophyll biosynthetic process	2.94E-02
151	GO:0009817: defense response to fungus, incompatible interaction	3.16E-02
152	GO:0007568: aging	3.50E-02
153	GO:0048527: lateral root development	3.50E-02
154	GO:0009631: cold acclimation	3.50E-02
155	GO:0080167: response to karrikin	3.92E-02
156	GO:0006511: ubiquitin-dependent protein catabolic process	4.12E-02
157	GO:0016192: vesicle-mediated transport	4.12E-02
158	GO:0006887: exocytosis	4.22E-02
159	GO:0042542: response to hydrogen peroxide	4.35E-02
160	GO:0042546: cell wall biogenesis	4.60E-02
161	GO:0009644: response to high light intensity	4.73E-02
162	GO:0009965: leaf morphogenesis	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	0.00E+00
2	GO:0047886: farnesol dehydrogenase activity	0.00E+00
3	GO:0004360: glutamine-fructose-6-phosphate transaminase (isomerizing) activity	0.00E+00
4	GO:0008752: FMN reductase activity	0.00E+00
5	GO:0016603: glutaminyl-peptide cyclotransferase activity	0.00E+00
6	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
7	GO:0033759: flavone synthase activity	0.00E+00
8	GO:0004615: phosphomannomutase activity	0.00E+00
9	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
10	GO:0050220: prostaglandin-E synthase activity	0.00E+00
11	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
12	GO:0052873: FMN reductase (NADPH) activity	0.00E+00
13	GO:0005212: structural constituent of eye lens	0.00E+00
14	GO:0051082: unfolded protein binding	1.48E-06
15	GO:0003756: protein disulfide isomerase activity	3.36E-06
16	GO:0005460: UDP-glucose transmembrane transporter activity	1.66E-05
17	GO:0004190: aspartic-type endopeptidase activity	3.37E-05
18	GO:0005459: UDP-galactose transmembrane transporter activity	4.91E-05
19	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	4.91E-05
20	GO:0005509: calcium ion binding	8.19E-05
21	GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity	2.04E-04
22	GO:0008909: isochorismate synthase activity	2.04E-04
23	GO:0015245: fatty acid transporter activity	2.04E-04
24	GO:0010285: L,L-diaminopimelate aminotransferase activity	2.04E-04
25	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.04E-04
26	GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity	2.04E-04
27	GO:0033984: indole-3-glycerol-phosphate lyase activity	2.04E-04
28	GO:0097367: carbohydrate derivative binding	2.04E-04
29	GO:0004815: aspartate-tRNA ligase activity	2.04E-04
30	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	2.04E-04
31	GO:0004325: ferrochelatase activity	2.04E-04
32	GO:0048037: cofactor binding	2.04E-04
33	GO:0008233: peptidase activity	3.12E-04
34	GO:0004568: chitinase activity	3.60E-04
35	GO:0004776: succinate-CoA ligase (GDP-forming) activity	4.57E-04
36	GO:0015105: arsenite transmembrane transporter activity	4.57E-04
37	GO:0019781: NEDD8 activating enzyme activity	4.57E-04
38	GO:0008805: carbon-monoxide oxygenase activity	4.57E-04
39	GO:0004775: succinate-CoA ligase (ADP-forming) activity	4.57E-04
40	GO:0008061: chitin binding	6.82E-04
41	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	7.44E-04
42	GO:0004816: asparagine-tRNA ligase activity	7.44E-04
43	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	7.44E-04
44	GO:0004049: anthranilate synthase activity	7.44E-04
45	GO:0000030: mannosyltransferase activity	7.44E-04
46	GO:0004148: dihydrolipoyl dehydrogenase activity	7.44E-04
47	GO:0004298: threonine-type endopeptidase activity	1.01E-03
48	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.06E-03
49	GO:0004576: oligosaccharyl transferase activity	1.41E-03
50	GO:0004834: tryptophan synthase activity	1.41E-03
51	GO:0005086: ARF guanyl-nucleotide exchange factor activity	1.41E-03
52	GO:0045431: flavonol synthase activity	1.80E-03
53	GO:0008641: small protein activating enzyme activity	1.80E-03
54	GO:0030976: thiamine pyrophosphate binding	2.21E-03
55	GO:0031593: polyubiquitin binding	2.21E-03
56	GO:0004029: aldehyde dehydrogenase (NAD) activity	2.21E-03
57	GO:0008483: transaminase activity	2.58E-03
58	GO:0004602: glutathione peroxidase activity	2.66E-03
59	GO:0004656: procollagen-proline 4-dioxygenase activity	2.66E-03
60	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.66E-03
61	GO:0005261: cation channel activity	2.66E-03
62	GO:0008320: protein transmembrane transporter activity	3.13E-03
63	GO:0008121: ubiquinol-cytochrome-c reductase activity	3.13E-03
64	GO:0004708: MAP kinase kinase activity	3.63E-03
65	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.76E-03
66	GO:0008135: translation factor activity, RNA binding	4.15E-03
67	GO:0050897: cobalt ion binding	4.35E-03
68	GO:0003746: translation elongation factor activity	4.76E-03
69	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.76E-03
70	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	5.27E-03
71	GO:0004129: cytochrome-c oxidase activity	6.48E-03
72	GO:0031072: heat shock protein binding	7.78E-03
73	GO:0005262: calcium channel activity	7.78E-03
74	GO:0005217: intracellular ligand-gated ion channel activity	9.17E-03
75	GO:0004970: ionotropic glutamate receptor activity	9.17E-03
76	GO:0003712: transcription cofactor activity	9.17E-03
77	GO:0031418: L-ascorbic acid binding	1.06E-02
78	GO:0043130: ubiquitin binding	1.06E-02
79	GO:0030246: carbohydrate binding	1.14E-02
80	GO:0015035: protein disulfide oxidoreductase activity	1.22E-02
81	GO:0016746: transferase activity, transferring acyl groups	1.22E-02
82	GO:0016779: nucleotidyltransferase activity	1.30E-02
83	GO:0004674: protein serine/threonine kinase activity	1.48E-02
84	GO:0008565: protein transporter activity	1.77E-02
85	GO:0050662: coenzyme binding	1.82E-02
86	GO:0004791: thioredoxin-disulfide reductase activity	1.82E-02
87	GO:0016853: isomerase activity	1.82E-02
88	GO:0010181: FMN binding	1.82E-02
89	GO:0016301: kinase activity	2.00E-02
90	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.41E-02
91	GO:0015250: water channel activity	2.61E-02
92	GO:0000166: nucleotide binding	2.82E-02
93	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.83E-02
94	GO:0030247: polysaccharide binding	2.94E-02
95	GO:0004683: calmodulin-dependent protein kinase activity	2.94E-02
96	GO:0004806: triglyceride lipase activity	2.94E-02
97	GO:0030145: manganese ion binding	3.50E-02
98	GO:0000987: core promoter proximal region sequence-specific DNA binding	3.86E-02
99	GO:0000149: SNARE binding	3.98E-02
100	GO:0005507: copper ion binding	4.37E-02
101	GO:0005484: SNAP receptor activity	4.47E-02
102	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0031205: endoplasmic reticulum Sec complex	0.00E+00
2	GO:0005784: Sec61 translocon complex	0.00E+00
3	GO:0005783: endoplasmic reticulum	8.30E-16
4	GO:0005788: endoplasmic reticulum lumen	6.89E-12
5	GO:0005829: cytosol	7.20E-07
6	GO:0005774: vacuolar membrane	1.46E-05
7	GO:0008250: oligosaccharyltransferase complex	4.91E-05
8	GO:0005789: endoplasmic reticulum membrane	7.77E-05
9	GO:0005886: plasma membrane	8.30E-05
10	GO:0045252: oxoglutarate dehydrogenase complex	2.04E-04
11	GO:0031901: early endosome membrane	2.57E-04
12	GO:0048046: apoplast	3.03E-04
13	GO:0009506: plasmodesma	3.14E-04
14	GO:0030134: ER to Golgi transport vesicle	4.57E-04
15	GO:0030176: integral component of endoplasmic reticulum membrane	6.82E-04
16	GO:0005839: proteasome core complex	1.01E-03
17	GO:1990726: Lsm1-7-Pat1 complex	1.06E-03
18	GO:0000502: proteasome complex	1.17E-03
19	GO:0030660: Golgi-associated vesicle membrane	1.41E-03
20	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	1.41E-03
21	GO:0005746: mitochondrial respiratory chain	1.80E-03
22	GO:0009507: chloroplast	2.05E-03
23	GO:0032588: trans-Golgi network membrane	2.21E-03
24	GO:0005623: cell	2.51E-03
25	GO:0030173: integral component of Golgi membrane	2.66E-03
26	GO:0009505: plant-type cell wall	2.67E-03
27	GO:0031595: nuclear proteasome complex	3.13E-03
28	GO:0005618: cell wall	3.35E-03
29	GO:0005688: U6 snRNP	3.63E-03
30	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	3.63E-03
31	GO:0019773: proteasome core complex, alpha-subunit complex	4.15E-03
32	GO:0046540: U4/U6 x U5 tri-snRNP complex	4.15E-03
33	GO:0031090: organelle membrane	4.70E-03
34	GO:0005765: lysosomal membrane	6.48E-03
35	GO:0008541: proteasome regulatory particle, lid subcomplex	6.48E-03
36	GO:0005773: vacuole	6.66E-03
37	GO:0005750: mitochondrial respiratory chain complex III	8.47E-03
38	GO:0005732: small nucleolar ribonucleoprotein complex	1.29E-02
39	GO:0031225: anchored component of membrane	1.42E-02
40	GO:0016020: membrane	1.79E-02
41	GO:0005759: mitochondrial matrix	1.86E-02
42	GO:0009504: cell plate	1.92E-02
43	GO:0016592: mediator complex	2.11E-02
44	GO:0032580: Golgi cisterna membrane	2.30E-02
45	GO:0016021: integral component of membrane	2.33E-02
46	GO:0031201: SNARE complex	4.22E-02
47	GO:0005730: nucleolus	4.53E-02