co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G60260

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071327: cellular response to trehalose stimulus	0.00E+00
2	GO:0043048: dolichyl monophosphate biosynthetic process	0.00E+00
3	GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	0.00E+00
4	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
5	GO:0045792: negative regulation of cell size	0.00E+00
6	GO:1900367: positive regulation of defense response to insect	0.00E+00
7	GO:0010360: negative regulation of anion channel activity	0.00E+00
8	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
9	GO:2000541: positive regulation of protein geranylgeranylation	0.00E+00
10	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
11	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
12	GO:0009626: plant-type hypersensitive response	2.21E-07
13	GO:0009617: response to bacterium	2.99E-06
14	GO:0048281: inflorescence morphogenesis	3.82E-06
15	GO:0009816: defense response to bacterium, incompatible interaction	7.94E-06
16	GO:0006468: protein phosphorylation	1.13E-05
17	GO:0080142: regulation of salicylic acid biosynthetic process	1.67E-05
18	GO:0009697: salicylic acid biosynthetic process	2.73E-05
19	GO:0031348: negative regulation of defense response	3.49E-05
20	GO:0010942: positive regulation of cell death	4.09E-05
21	GO:0043562: cellular response to nitrogen levels	1.25E-04
22	GO:0010200: response to chitin	1.30E-04
23	GO:0051245: negative regulation of cellular defense response	1.44E-04
24	GO:0009609: response to symbiotic bacterium	1.44E-04
25	GO:1901183: positive regulation of camalexin biosynthetic process	1.44E-04
26	GO:0009270: response to humidity	1.44E-04
27	GO:1902361: mitochondrial pyruvate transmembrane transport	1.44E-04
28	GO:0060862: negative regulation of floral organ abscission	1.44E-04
29	GO:0043069: negative regulation of programmed cell death	2.18E-04
30	GO:0009751: response to salicylic acid	2.56E-04
31	GO:0031648: protein destabilization	3.29E-04
32	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	3.29E-04
33	GO:0010618: aerenchyma formation	3.29E-04
34	GO:0006212: uracil catabolic process	3.29E-04
35	GO:0019483: beta-alanine biosynthetic process	3.29E-04
36	GO:0006850: mitochondrial pyruvate transport	3.29E-04
37	GO:0015865: purine nucleotide transport	3.29E-04
38	GO:1902000: homogentisate catabolic process	3.29E-04
39	GO:0031349: positive regulation of defense response	3.29E-04
40	GO:0019725: cellular homeostasis	3.29E-04
41	GO:0043132: NAD transport	3.29E-04
42	GO:0019441: tryptophan catabolic process to kynurenine	3.29E-04
43	GO:0002237: response to molecule of bacterial origin	3.77E-04
44	GO:0070588: calcium ion transmembrane transport	4.23E-04
45	GO:0009863: salicylic acid mediated signaling pathway	5.23E-04
46	GO:0010186: positive regulation of cellular defense response	5.40E-04
47	GO:0009072: aromatic amino acid family metabolic process	5.40E-04
48	GO:0010581: regulation of starch biosynthetic process	5.40E-04
49	GO:0061158: 3'-UTR-mediated mRNA destabilization	5.40E-04
50	GO:0055074: calcium ion homeostasis	5.40E-04
51	GO:0044375: regulation of peroxisome size	5.40E-04
52	GO:0045793: positive regulation of cell size	5.40E-04
53	GO:0042742: defense response to bacterium	6.38E-04
54	GO:0071456: cellular response to hypoxia	6.89E-04
55	GO:0009625: response to insect	7.50E-04
56	GO:0006952: defense response	7.53E-04
57	GO:0043207: response to external biotic stimulus	7.73E-04
58	GO:0046902: regulation of mitochondrial membrane permeability	7.73E-04
59	GO:0006612: protein targeting to membrane	7.73E-04
60	GO:0009399: nitrogen fixation	7.73E-04
61	GO:0015858: nucleoside transport	7.73E-04
62	GO:0080037: negative regulation of cytokinin-activated signaling pathway	1.02E-03
63	GO:0060548: negative regulation of cell death	1.02E-03
64	GO:0046345: abscisic acid catabolic process	1.02E-03
65	GO:0010483: pollen tube reception	1.02E-03
66	GO:0045727: positive regulation of translation	1.02E-03
67	GO:0010363: regulation of plant-type hypersensitive response	1.02E-03
68	GO:0015031: protein transport	1.02E-03
69	GO:0010188: response to microbial phytotoxin	1.02E-03
70	GO:0006542: glutamine biosynthetic process	1.02E-03
71	GO:0006886: intracellular protein transport	1.09E-03
72	GO:0000302: response to reactive oxygen species	1.24E-03
73	GO:0010193: response to ozone	1.24E-03
74	GO:0018344: protein geranylgeranylation	1.29E-03
75	GO:0010225: response to UV-C	1.29E-03
76	GO:2000762: regulation of phenylpropanoid metabolic process	1.29E-03
77	GO:0046283: anthocyanin-containing compound metabolic process	1.29E-03
78	GO:0002238: response to molecule of fungal origin	1.59E-03
79	GO:0009759: indole glucosinolate biosynthetic process	1.59E-03
80	GO:0010310: regulation of hydrogen peroxide metabolic process	1.91E-03
81	GO:0010150: leaf senescence	1.95E-03
82	GO:0042128: nitrate assimilation	1.98E-03
83	GO:0009651: response to salt stress	2.19E-03
84	GO:0010044: response to aluminum ion	2.24E-03
85	GO:0009610: response to symbiotic fungus	2.24E-03
86	GO:0043090: amino acid import	2.24E-03
87	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.25E-03
88	GO:0008219: cell death	2.31E-03
89	GO:0009819: drought recovery	2.60E-03
90	GO:0043068: positive regulation of programmed cell death	2.60E-03
91	GO:0006605: protein targeting	2.60E-03
92	GO:0030162: regulation of proteolysis	2.60E-03
93	GO:2000070: regulation of response to water deprivation	2.60E-03
94	GO:0009808: lignin metabolic process	2.96E-03
95	GO:2000031: regulation of salicylic acid mediated signaling pathway	2.96E-03
96	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	2.96E-03
97	GO:0010204: defense response signaling pathway, resistance gene-independent	2.96E-03
98	GO:0006839: mitochondrial transport	3.32E-03
99	GO:0007338: single fertilization	3.35E-03
100	GO:0051865: protein autoubiquitination	3.35E-03
101	GO:0010112: regulation of systemic acquired resistance	3.35E-03
102	GO:0042542: response to hydrogen peroxide	3.61E-03
103	GO:0035556: intracellular signal transduction	3.71E-03
104	GO:0051707: response to other organism	3.75E-03
105	GO:1900426: positive regulation of defense response to bacterium	3.76E-03
106	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	3.76E-03
107	GO:0008202: steroid metabolic process	3.76E-03
108	GO:0009870: defense response signaling pathway, resistance gene-dependent	4.18E-03
109	GO:0009682: induced systemic resistance	4.61E-03
110	GO:0052544: defense response by callose deposition in cell wall	4.61E-03
111	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.64E-03
112	GO:0009846: pollen germination	4.70E-03
113	GO:0016192: vesicle-mediated transport	4.74E-03
114	GO:0046777: protein autophosphorylation	4.84E-03
115	GO:0000266: mitochondrial fission	5.06E-03
116	GO:0012501: programmed cell death	5.06E-03
117	GO:0015706: nitrate transport	5.06E-03
118	GO:0002213: defense response to insect	5.06E-03
119	GO:0010105: negative regulation of ethylene-activated signaling pathway	5.06E-03
120	GO:0006807: nitrogen compound metabolic process	5.52E-03
121	GO:0009266: response to temperature stimulus	6.00E-03
122	GO:0010053: root epidermal cell differentiation	6.50E-03
123	GO:0010167: response to nitrate	6.50E-03
124	GO:0006833: water transport	7.00E-03
125	GO:0018105: peptidyl-serine phosphorylation	7.39E-03
126	GO:0048278: vesicle docking	8.61E-03
127	GO:0009814: defense response, incompatible interaction	9.17E-03
128	GO:2000022: regulation of jasmonic acid mediated signaling pathway	9.17E-03
129	GO:0009411: response to UV	9.75E-03
130	GO:0006979: response to oxidative stress	1.01E-02
131	GO:0010584: pollen exine formation	1.03E-02
132	GO:0010091: trichome branching	1.03E-02
133	GO:0042391: regulation of membrane potential	1.16E-02
134	GO:0034220: ion transmembrane transport	1.16E-02
135	GO:0008360: regulation of cell shape	1.22E-02
136	GO:0006662: glycerol ether metabolic process	1.22E-02
137	GO:0061025: membrane fusion	1.28E-02
138	GO:0006623: protein targeting to vacuole	1.35E-02
139	GO:0008654: phospholipid biosynthetic process	1.35E-02
140	GO:0009738: abscisic acid-activated signaling pathway	1.45E-02
141	GO:0007264: small GTPase mediated signal transduction	1.48E-02
142	GO:0009567: double fertilization forming a zygote and endosperm	1.62E-02
143	GO:0051607: defense response to virus	1.76E-02
144	GO:0001666: response to hypoxia	1.84E-02
145	GO:0009826: unidimensional cell growth	1.86E-02
146	GO:0009607: response to biotic stimulus	1.91E-02
147	GO:0046686: response to cadmium ion	1.94E-02
148	GO:0009627: systemic acquired resistance	1.99E-02
149	GO:0006906: vesicle fusion	1.99E-02
150	GO:0006970: response to osmotic stress	2.08E-02
151	GO:0016311: dephosphorylation	2.14E-02
152	GO:0007049: cell cycle	2.15E-02
153	GO:0009723: response to ethylene	2.23E-02
154	GO:0009407: toxin catabolic process	2.38E-02
155	GO:0048527: lateral root development	2.46E-02
156	GO:0006865: amino acid transport	2.54E-02
157	GO:0009867: jasmonic acid mediated signaling pathway	2.63E-02
158	GO:0045087: innate immune response	2.63E-02
159	GO:0034599: cellular response to oxidative stress	2.71E-02
160	GO:0045454: cell redox homeostasis	2.87E-02
161	GO:0006887: exocytosis	2.97E-02
162	GO:0009737: response to abscisic acid	3.08E-02
163	GO:0032259: methylation	3.38E-02
164	GO:0009965: leaf morphogenesis	3.42E-02
165	GO:0006855: drug transmembrane transport	3.51E-02
166	GO:0009408: response to heat	3.53E-02
167	GO:0031347: regulation of defense response	3.60E-02
168	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	3.60E-02
169	GO:0009753: response to jasmonic acid	3.78E-02
170	GO:0006486: protein glycosylation	3.89E-02
171	GO:0008152: metabolic process	3.89E-02
172	GO:0051603: proteolysis involved in cellular protein catabolic process	3.98E-02
173	GO:0009909: regulation of flower development	4.18E-02
174	GO:0006096: glycolytic process	4.38E-02
175	GO:0048367: shoot system development	4.48E-02
176	GO:0009620: response to fungus	4.68E-02
177	GO:0042545: cell wall modification	4.89E-02
178	GO:0050832: defense response to fungus	4.96E-02
179	GO:0009624: response to nematode	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0016504: peptidase activator activity	0.00E+00
2	GO:0016603: glutaminyl-peptide cyclotransferase activity	0.00E+00
3	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
4	GO:0004168: dolichol kinase activity	0.00E+00
5	GO:0003837: beta-ureidopropionase activity	0.00E+00
6	GO:0070577: lysine-acetylated histone binding	0.00E+00
7	GO:0044610: FMN transmembrane transporter activity	0.00E+00
8	GO:0005092: GDP-dissociation inhibitor activity	0.00E+00
9	GO:0005516: calmodulin binding	7.44E-07
10	GO:0004713: protein tyrosine kinase activity	4.82E-06
11	GO:0004674: protein serine/threonine kinase activity	3.69E-05
12	GO:0008320: protein transmembrane transporter activity	7.70E-05
13	GO:0080042: ADP-glucose pyrophosphohydrolase activity	1.44E-04
14	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	1.44E-04
15	GO:0015230: FAD transmembrane transporter activity	1.44E-04
16	GO:0004683: calmodulin-dependent protein kinase activity	1.97E-04
17	GO:0016301: kinase activity	3.11E-04
18	GO:0015228: coenzyme A transmembrane transporter activity	3.29E-04
19	GO:0080041: ADP-ribose pyrophosphohydrolase activity	3.29E-04
20	GO:0051724: NAD transporter activity	3.29E-04
21	GO:0017110: nucleoside-diphosphatase activity	3.29E-04
22	GO:0032934: sterol binding	3.29E-04
23	GO:0004061: arylformamidase activity	3.29E-04
24	GO:0004566: beta-glucuronidase activity	3.29E-04
25	GO:0005388: calcium-transporting ATPase activity	3.34E-04
26	GO:0004672: protein kinase activity	3.53E-04
27	GO:0005524: ATP binding	3.88E-04
28	GO:0016595: glutamate binding	5.40E-04
29	GO:0005093: Rab GDP-dissociation inhibitor activity	5.40E-04
30	GO:0050833: pyruvate transmembrane transporter activity	5.40E-04
31	GO:0005509: calcium ion binding	5.43E-04
32	GO:0070628: proteasome binding	1.02E-03
33	GO:0004356: glutamate-ammonia ligase activity	1.29E-03
34	GO:0010294: abscisic acid glucosyltransferase activity	1.29E-03
35	GO:0080122: AMP transmembrane transporter activity	1.29E-03
36	GO:0017137: Rab GTPase binding	1.29E-03
37	GO:0047631: ADP-ribose diphosphatase activity	1.29E-03
38	GO:0005471: ATP:ADP antiporter activity	1.29E-03
39	GO:0004605: phosphatidate cytidylyltransferase activity	1.59E-03
40	GO:0000210: NAD+ diphosphatase activity	1.59E-03
41	GO:0015217: ADP transmembrane transporter activity	1.91E-03
42	GO:0005347: ATP transmembrane transporter activity	1.91E-03
43	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.98E-03
44	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.60E-03
45	GO:0005544: calcium-dependent phospholipid binding	2.60E-03
46	GO:0008142: oxysterol binding	2.96E-03
47	GO:0003843: 1,3-beta-D-glucan synthase activity	2.96E-03
48	GO:0071949: FAD binding	3.35E-03
49	GO:0004364: glutathione transferase activity	3.61E-03
50	GO:0015112: nitrate transmembrane transporter activity	3.76E-03
51	GO:0004743: pyruvate kinase activity	3.76E-03
52	GO:0030955: potassium ion binding	3.76E-03
53	GO:0008794: arsenate reductase (glutaredoxin) activity	4.61E-03
54	GO:0005262: calcium channel activity	5.52E-03
55	GO:0030552: cAMP binding	6.50E-03
56	GO:0030553: cGMP binding	6.50E-03
57	GO:0080043: quercetin 3-O-glucosyltransferase activity	6.56E-03
58	GO:0080044: quercetin 7-O-glucosyltransferase activity	6.56E-03
59	GO:0015035: protein disulfide oxidoreductase activity	7.39E-03
60	GO:0003954: NADH dehydrogenase activity	7.52E-03
61	GO:0005216: ion channel activity	8.06E-03
62	GO:0004298: threonine-type endopeptidase activity	8.61E-03
63	GO:0003727: single-stranded RNA binding	1.03E-02
64	GO:0047134: protein-disulfide reductase activity	1.09E-02
65	GO:0005249: voltage-gated potassium channel activity	1.16E-02
66	GO:0030551: cyclic nucleotide binding	1.16E-02
67	GO:0015297: antiporter activity	1.19E-02
68	GO:0008080: N-acetyltransferase activity	1.22E-02
69	GO:0001085: RNA polymerase II transcription factor binding	1.22E-02
70	GO:0016887: ATPase activity	1.27E-02
71	GO:0004791: thioredoxin-disulfide reductase activity	1.28E-02
72	GO:0008194: UDP-glycosyltransferase activity	1.39E-02
73	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.55E-02
74	GO:0042802: identical protein binding	1.58E-02
75	GO:0016597: amino acid binding	1.76E-02
76	GO:0015250: water channel activity	1.84E-02
77	GO:0008168: methyltransferase activity	1.86E-02
78	GO:0004806: triglyceride lipase activity	2.06E-02
79	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.14E-02
80	GO:0015238: drug transmembrane transporter activity	2.30E-02
81	GO:0005096: GTPase activator activity	2.30E-02
82	GO:0004222: metalloendopeptidase activity	2.38E-02
83	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.46E-02
84	GO:0061630: ubiquitin protein ligase activity	2.52E-02
85	GO:0003993: acid phosphatase activity	2.71E-02
86	GO:0000987: core promoter proximal region sequence-specific DNA binding	2.71E-02
87	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.80E-02
88	GO:0000149: SNARE binding	2.80E-02
89	GO:0004722: protein serine/threonine phosphatase activity	3.14E-02
90	GO:0005484: SNAP receptor activity	3.15E-02
91	GO:0015293: symporter activity	3.42E-02
92	GO:0005198: structural molecule activity	3.42E-02
93	GO:0003924: GTPase activity	3.53E-02
94	GO:0051287: NAD binding	3.60E-02
95	GO:0016298: lipase activity	3.98E-02
96	GO:0015171: amino acid transmembrane transporter activity	4.18E-02
97	GO:0031625: ubiquitin protein ligase binding	4.18E-02
98	GO:0045330: aspartyl esterase activity	4.18E-02
99	GO:0043565: sequence-specific DNA binding	4.21E-02
100	GO:0030599: pectinesterase activity	4.78E-02
101	GO:0022857: transmembrane transporter activity	4.78E-02
102	GO:0051082: unfolded protein binding	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	7.24E-11
2	GO:0005789: endoplasmic reticulum membrane	8.23E-05
3	GO:0005783: endoplasmic reticulum	1.39E-04
4	GO:0016021: integral component of membrane	1.63E-04
5	GO:0031304: intrinsic component of mitochondrial inner membrane	3.29E-04
6	GO:0005901: caveola	3.29E-04
7	GO:0030134: ER to Golgi transport vesicle	3.29E-04
8	GO:0046861: glyoxysomal membrane	5.40E-04
9	GO:0030139: endocytic vesicle	5.40E-04
10	GO:0005839: proteasome core complex	6.31E-04
11	GO:0005968: Rab-protein geranylgeranyltransferase complex	7.73E-04
12	GO:0032585: multivesicular body membrane	7.73E-04
13	GO:0030658: transport vesicle membrane	7.73E-04
14	GO:0032586: protein storage vacuole membrane	1.02E-03
15	GO:0005801: cis-Golgi network	1.91E-03
16	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	2.24E-03
17	GO:0005887: integral component of plasma membrane	2.27E-03
18	GO:0031305: integral component of mitochondrial inner membrane	2.60E-03
19	GO:0000326: protein storage vacuole	2.96E-03
20	GO:0009514: glyoxysome	2.96E-03
21	GO:0005779: integral component of peroxisomal membrane	2.96E-03
22	GO:0000148: 1,3-beta-D-glucan synthase complex	2.96E-03
23	GO:0031901: early endosome membrane	3.35E-03
24	GO:0005740: mitochondrial envelope	4.18E-03
25	GO:0005829: cytosol	4.31E-03
26	GO:0005765: lysosomal membrane	4.61E-03
27	GO:0031012: extracellular matrix	5.52E-03
28	GO:0016020: membrane	6.47E-03
29	GO:0030176: integral component of endoplasmic reticulum membrane	6.50E-03
30	GO:0005769: early endosome	7.00E-03
31	GO:0005741: mitochondrial outer membrane	8.61E-03
32	GO:0009524: phragmoplast	9.48E-03
33	GO:0009504: cell plate	1.35E-02
34	GO:0071944: cell periphery	1.55E-02
35	GO:0032580: Golgi cisterna membrane	1.62E-02
36	GO:0005778: peroxisomal membrane	1.69E-02
37	GO:0009506: plasmodesma	1.70E-02
38	GO:0005777: peroxisome	1.80E-02
39	GO:0005788: endoplasmic reticulum lumen	1.91E-02
40	GO:0005667: transcription factor complex	1.99E-02
41	GO:0019005: SCF ubiquitin ligase complex	2.22E-02
42	GO:0005618: cell wall	2.77E-02
43	GO:0005819: spindle	2.80E-02
44	GO:0031201: SNARE complex	2.97E-02
45	GO:0031902: late endosome membrane	2.97E-02
46	GO:0005743: mitochondrial inner membrane	3.28E-02
47	GO:0005794: Golgi apparatus	3.34E-02
48	GO:0043231: intracellular membrane-bounded organelle	3.89E-02
49	GO:0000502: proteasome complex	3.89E-02
50	GO:0005635: nuclear envelope	4.08E-02
51	GO:0005773: vacuole	4.47E-02
52	GO:0012505: endomembrane system	4.89E-02
53	GO:0009706: chloroplast inner membrane	4.99E-02