Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G60245

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0044843: cell cycle G1/S phase transition0.00E+00
2GO:0006412: translation4.01E-132
3GO:0042254: ribosome biogenesis5.35E-53
4GO:0000027: ribosomal large subunit assembly2.55E-11
5GO:0009735: response to cytokinin7.18E-07
6GO:0000028: ribosomal small subunit assembly9.81E-07
7GO:0042274: ribosomal small subunit biogenesis1.40E-05
8GO:0009955: adaxial/abaxial pattern specification4.86E-05
9GO:0006407: rRNA export from nucleus1.30E-04
10GO:0030490: maturation of SSU-rRNA1.30E-04
11GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.30E-04
12GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.30E-04
13GO:0009409: response to cold2.04E-04
14GO:0006626: protein targeting to mitochondrion2.89E-04
15GO:0048569: post-embryonic animal organ development2.99E-04
16GO:0009967: positive regulation of signal transduction2.99E-04
17GO:0009965: leaf morphogenesis4.21E-04
18GO:0002181: cytoplasmic translation4.92E-04
19GO:0010476: gibberellin mediated signaling pathway4.92E-04
20GO:0042256: mature ribosome assembly4.92E-04
21GO:0006364: rRNA processing5.31E-04
22GO:0040007: growth6.54E-04
23GO:0070301: cellular response to hydrogen peroxide7.04E-04
24GO:0006241: CTP biosynthetic process7.04E-04
25GO:0006165: nucleoside diphosphate phosphorylation7.04E-04
26GO:0006228: UTP biosynthetic process7.04E-04
27GO:0009793: embryo development ending in seed dormancy7.08E-04
28GO:0006183: GTP biosynthetic process9.34E-04
29GO:0006414: translational elongation1.16E-03
30GO:0071493: cellular response to UV-B1.18E-03
31GO:0000470: maturation of LSU-rRNA1.45E-03
32GO:0000911: cytokinesis by cell plate formation1.73E-03
33GO:0001558: regulation of cell growth2.69E-03
34GO:0008283: cell proliferation3.26E-03
35GO:0009644: response to high light intensity3.52E-03
36GO:0010015: root morphogenesis4.18E-03
37GO:0006913: nucleocytoplasmic transport4.18E-03
38GO:0006820: anion transport4.58E-03
39GO:0010229: inflorescence development5.00E-03
40GO:0010102: lateral root morphogenesis5.00E-03
41GO:0030150: protein import into mitochondrial matrix6.81E-03
42GO:0051302: regulation of cell division7.30E-03
43GO:0007005: mitochondrion organization8.30E-03
44GO:0071215: cellular response to abscisic acid stimulus8.82E-03
45GO:0009749: response to glucose1.22E-02
46GO:0009791: post-embryonic development1.22E-02
47GO:0032502: developmental process1.34E-02
48GO:0010090: trichome morphogenesis1.40E-02
49GO:0046686: response to cadmium ion1.56E-02
50GO:0006811: ion transport2.15E-02
51GO:0010043: response to zinc ion2.22E-02
52GO:0006417: regulation of translation3.77E-02
53GO:0009620: response to fungus4.23E-02
54GO:0009651: response to salt stress4.80E-02
RankGO TermAdjusted P value
1GO:0003735: structural constituent of ribosome7.27E-165
2GO:0003729: mRNA binding1.44E-38
3GO:0019843: rRNA binding1.46E-08
4GO:0008097: 5S rRNA binding7.44E-06
5GO:0005078: MAP-kinase scaffold activity2.99E-04
6GO:0032947: protein complex scaffold4.92E-04
7GO:0070181: small ribosomal subunit rRNA binding4.92E-04
8GO:0004550: nucleoside diphosphate kinase activity7.04E-04
9GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity2.01E-03
10GO:0008235: metalloexopeptidase activity2.04E-03
11GO:0015288: porin activity2.36E-03
12GO:0008308: voltage-gated anion channel activity2.69E-03
13GO:0015266: protein channel activity5.00E-03
14GO:0003723: RNA binding2.64E-02
RankGO TermAdjusted P value
1GO:0022626: cytosolic ribosome9.53E-119
2GO:0005840: ribosome3.64E-104
3GO:0022625: cytosolic large ribosomal subunit1.58E-95
4GO:0022627: cytosolic small ribosomal subunit3.66E-61
5GO:0005737: cytoplasm1.60E-39
6GO:0005730: nucleolus2.58E-39
7GO:0005829: cytosol1.58E-34
8GO:0009506: plasmodesma7.93E-29
9GO:0015934: large ribosomal subunit3.16E-20
10GO:0005774: vacuolar membrane1.26E-16
11GO:0016020: membrane3.05E-16
12GO:0015935: small ribosomal subunit3.89E-13
13GO:0005618: cell wall1.19E-12
14GO:0005773: vacuole1.25E-11
15GO:0005886: plasma membrane2.16E-09
16GO:0009507: chloroplast7.58E-05
17GO:0030686: 90S preribosome1.30E-04
18GO:0046930: pore complex2.69E-03
19GO:0005742: mitochondrial outer membrane translocase complex2.69E-03
20GO:0005758: mitochondrial intermembrane space6.81E-03
21GO:0005741: mitochondrial outer membrane7.79E-03
22GO:0030529: intracellular ribonucleoprotein complex1.66E-02
23GO:0005622: intracellular2.60E-02
24GO:0005743: mitochondrial inner membrane2.85E-02
25GO:0005834: heterotrimeric G-protein complex4.14E-02
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Gene type



Gene DE type