Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G59300

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006780: uroporphyrinogen III biosynthetic process0.00E+00
2GO:0043266: regulation of potassium ion transport3.50E-05
3GO:0010480: microsporocyte differentiation3.50E-05
4GO:0031338: regulation of vesicle fusion3.50E-05
5GO:0080051: cutin transport3.50E-05
6GO:2000021: regulation of ion homeostasis3.50E-05
7GO:0010020: chloroplast fission5.08E-05
8GO:0015908: fatty acid transport8.78E-05
9GO:0010270: photosystem II oxygen evolving complex assembly8.78E-05
10GO:0090630: activation of GTPase activity1.52E-04
11GO:0043572: plastid fission2.25E-04
12GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly2.25E-04
13GO:0051639: actin filament network formation2.25E-04
14GO:1901601: strigolactone biosynthetic process3.05E-04
15GO:0010021: amylopectin biosynthetic process3.05E-04
16GO:0010222: stem vascular tissue pattern formation3.05E-04
17GO:0051764: actin crosslink formation3.05E-04
18GO:0015995: chlorophyll biosynthetic process3.47E-04
19GO:0006828: manganese ion transport4.78E-04
20GO:0048437: floral organ development6.66E-04
21GO:0016559: peroxisome fission7.68E-04
22GO:0006779: porphyrin-containing compound biosynthetic process1.09E-03
23GO:0006782: protoporphyrinogen IX biosynthetic process1.20E-03
24GO:0006816: calcium ion transport1.32E-03
25GO:0048229: gametophyte development1.32E-03
26GO:0006820: anion transport1.44E-03
27GO:0010588: cotyledon vascular tissue pattern formation1.57E-03
28GO:0009718: anthocyanin-containing compound biosynthetic process1.57E-03
29GO:0010075: regulation of meristem growth1.57E-03
30GO:0010223: secondary shoot formation1.70E-03
31GO:0009934: regulation of meristem structural organization1.70E-03
32GO:0071732: cellular response to nitric oxide1.84E-03
33GO:0051017: actin filament bundle assembly2.12E-03
34GO:0071369: cellular response to ethylene stimulus2.71E-03
35GO:0048653: anther development3.20E-03
36GO:0019252: starch biosynthetic process3.70E-03
37GO:0071554: cell wall organization or biogenesis3.88E-03
38GO:0071281: cellular response to iron ion4.24E-03
39GO:0016042: lipid catabolic process5.28E-03
40GO:0009817: defense response to fungus, incompatible interaction5.99E-03
41GO:0042538: hyperosmotic salinity response9.86E-03
42GO:0006812: cation transport9.86E-03
43GO:0007623: circadian rhythm1.96E-02
44GO:0009739: response to gibberellin2.12E-02
45GO:0010468: regulation of gene expression2.22E-02
46GO:0009658: chloroplast organization2.67E-02
47GO:0009723: response to ethylene2.96E-02
48GO:0005975: carbohydrate metabolic process2.97E-02
49GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.19E-02
50GO:0006886: intracellular protein transport3.62E-02
51GO:0007165: signal transduction4.07E-02
52GO:0006629: lipid metabolic process4.11E-02
53GO:0009753: response to jasmonic acid4.32E-02
54GO:0008152: metabolic process4.41E-02
55GO:0016310: phosphorylation4.78E-02
RankGO TermAdjusted P value
1GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity0.00E+00
2GO:0004852: uroporphyrinogen-III synthase activity0.00E+00
3GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
4GO:0004856: xylulokinase activity3.50E-05
5GO:0015245: fatty acid transporter activity3.50E-05
6GO:0005227: calcium activated cation channel activity3.50E-05
7GO:0033201: alpha-1,4-glucan synthase activity8.78E-05
8GO:0004373: glycogen (starch) synthase activity1.52E-04
9GO:0030267: glyoxylate reductase (NADP) activity1.52E-04
10GO:0009011: starch synthase activity3.05E-04
11GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor3.05E-04
12GO:0016773: phosphotransferase activity, alcohol group as acceptor3.89E-04
13GO:0017137: Rab GTPase binding3.89E-04
14GO:0008381: mechanically-gated ion channel activity3.89E-04
15GO:0042578: phosphoric ester hydrolase activity4.78E-04
16GO:0015631: tubulin binding5.70E-04
17GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity5.70E-04
18GO:0004723: calcium-dependent protein serine/threonine phosphatase activity5.70E-04
19GO:0004033: aldo-keto reductase (NADP) activity7.68E-04
20GO:0005384: manganese ion transmembrane transporter activity1.09E-03
21GO:0047372: acylglycerol lipase activity1.32E-03
22GO:0015095: magnesium ion transmembrane transporter activity1.57E-03
23GO:0005528: FK506 binding2.12E-03
24GO:0004707: MAP kinase activity2.41E-03
25GO:0004176: ATP-dependent peptidase activity2.41E-03
26GO:0033612: receptor serine/threonine kinase binding2.41E-03
27GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.46E-03
28GO:0016788: hydrolase activity, acting on ester bonds3.04E-03
29GO:0048038: quinone binding3.88E-03
30GO:0052689: carboxylic ester hydrolase activity4.08E-03
31GO:0051015: actin filament binding4.24E-03
32GO:0008237: metallopeptidase activity4.60E-03
33GO:0016413: O-acetyltransferase activity4.80E-03
34GO:0016491: oxidoreductase activity4.84E-03
35GO:0005096: GTPase activator activity6.19E-03
36GO:0004222: metalloendopeptidase activity6.40E-03
37GO:0003755: peptidyl-prolyl cis-trans isomerase activity9.36E-03
38GO:0003779: actin binding1.30E-02
39GO:0005509: calcium ion binding1.81E-02
40GO:0008017: microtubule binding2.02E-02
41GO:0042802: identical protein binding2.32E-02
42GO:0042803: protein homodimerization activity3.66E-02
43GO:0003924: GTPase activity4.11E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast2.05E-07
2GO:0009570: chloroplast stroma1.76E-05
3GO:0009897: external side of plasma membrane1.52E-04
4GO:0032432: actin filament bundle2.25E-04
5GO:0009941: chloroplast envelope3.01E-04
6GO:0009501: amyloplast7.68E-04
7GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)9.78E-04
8GO:0005884: actin filament1.32E-03
9GO:0010287: plastoglobule1.35E-03
10GO:0009535: chloroplast thylakoid membrane1.93E-03
11GO:0009536: plastid4.43E-03
12GO:0009707: chloroplast outer membrane5.99E-03
13GO:0005886: plasma membrane1.03E-02
14GO:0005777: peroxisome1.11E-02
15GO:0009534: chloroplast thylakoid1.17E-02
16GO:0012505: endomembrane system1.30E-02
17GO:0009706: chloroplast inner membrane1.33E-02
18GO:0009543: chloroplast thylakoid lumen1.56E-02
19GO:0009705: plant-type vacuole membrane1.96E-02
20GO:0031969: chloroplast membrane3.11E-02
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Gene type



Gene DE type