GO Enrichment Analysis of Co-expressed Genes with
AT3G58700
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 2 | GO:0044843: cell cycle G1/S phase transition | 0.00E+00 |
| 3 | GO:0006412: translation | 2.15E-86 |
| 4 | GO:0042254: ribosome biogenesis | 1.52E-34 |
| 5 | GO:0000027: ribosomal large subunit assembly | 6.45E-12 |
| 6 | GO:0002181: cytoplasmic translation | 1.82E-06 |
| 7 | GO:0009735: response to cytokinin | 2.21E-06 |
| 8 | GO:0006626: protein targeting to mitochondrion | 3.85E-06 |
| 9 | GO:0009793: embryo development ending in seed dormancy | 5.00E-05 |
| 10 | GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 9.50E-05 |
| 11 | GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 9.50E-05 |
| 12 | GO:0006407: rRNA export from nucleus | 9.50E-05 |
| 13 | GO:0006364: rRNA processing | 3.09E-04 |
| 14 | GO:0042256: mature ribosome assembly | 3.73E-04 |
| 15 | GO:0045039: protein import into mitochondrial inner membrane | 3.73E-04 |
| 16 | GO:1902626: assembly of large subunit precursor of preribosome | 3.73E-04 |
| 17 | GO:0070301: cellular response to hydrogen peroxide | 5.37E-04 |
| 18 | GO:0051085: chaperone mediated protein folding requiring cofactor | 5.37E-04 |
| 19 | GO:0006241: CTP biosynthetic process | 5.37E-04 |
| 20 | GO:0006165: nucleoside diphosphate phosphorylation | 5.37E-04 |
| 21 | GO:0006228: UTP biosynthetic process | 5.37E-04 |
| 22 | GO:0006986: response to unfolded protein | 5.37E-04 |
| 23 | GO:0042274: ribosomal small subunit biogenesis | 7.14E-04 |
| 24 | GO:0006183: GTP biosynthetic process | 7.14E-04 |
| 25 | GO:0071493: cellular response to UV-B | 9.02E-04 |
| 26 | GO:0009955: adaxial/abaxial pattern specification | 1.31E-03 |
| 27 | GO:0042255: ribosome assembly | 1.78E-03 |
| 28 | GO:0000028: ribosomal small subunit assembly | 1.78E-03 |
| 29 | GO:0001558: regulation of cell growth | 2.03E-03 |
| 30 | GO:0000387: spliceosomal snRNP assembly | 2.56E-03 |
| 31 | GO:0006820: anion transport | 3.44E-03 |
| 32 | GO:0010229: inflorescence development | 3.76E-03 |
| 33 | GO:0010102: lateral root morphogenesis | 3.76E-03 |
| 34 | GO:0048467: gynoecium development | 4.08E-03 |
| 35 | GO:0030150: protein import into mitochondrial matrix | 5.10E-03 |
| 36 | GO:0051302: regulation of cell division | 5.46E-03 |
| 37 | GO:0007005: mitochondrion organization | 6.20E-03 |
| 38 | GO:0040007: growth | 6.58E-03 |
| 39 | GO:0000413: protein peptidyl-prolyl isomerization | 7.79E-03 |
| 40 | GO:0009791: post-embryonic development | 9.06E-03 |
| 41 | GO:0032502: developmental process | 9.96E-03 |
| 42 | GO:0006811: ion transport | 1.59E-02 |
| 43 | GO:0010043: response to zinc ion | 1.65E-02 |
| 44 | GO:0008283: cell proliferation | 2.10E-02 |
| 45 | GO:0009644: response to high light intensity | 2.23E-02 |
| 46 | GO:0009965: leaf morphogenesis | 2.29E-02 |
| 47 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 2.41E-02 |
| 48 | GO:0009409: response to cold | 2.64E-02 |
| 49 | GO:0009734: auxin-activated signaling pathway | 2.83E-02 |
| 50 | GO:0009620: response to fungus | 3.14E-02 |
| 51 | GO:0046686: response to cadmium ion | 3.14E-02 |
| 52 | GO:0000398: mRNA splicing, via spliceosome | 3.70E-02 |
| 53 | GO:0006457: protein folding | 4.59E-02 |
| 54 | GO:0006413: translational initiation | 4.69E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016018: cyclosporin A binding | 0.00E+00 |
| 2 | GO:0003735: structural constituent of ribosome | 2.85E-99 |
| 3 | GO:0003729: mRNA binding | 3.21E-22 |
| 4 | GO:0019843: rRNA binding | 3.24E-06 |
| 5 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.03E-04 |
| 6 | GO:0003723: RNA binding | 1.05E-04 |
| 7 | GO:0008097: 5S rRNA binding | 5.37E-04 |
| 8 | GO:0004550: nucleoside diphosphate kinase activity | 5.37E-04 |
| 9 | GO:0008235: metalloexopeptidase activity | 1.54E-03 |
| 10 | GO:0015288: porin activity | 1.78E-03 |
| 11 | GO:0008308: voltage-gated anion channel activity | 2.03E-03 |
| 12 | GO:0001055: RNA polymerase II activity | 2.56E-03 |
| 13 | GO:0001054: RNA polymerase I activity | 3.14E-03 |
| 14 | GO:0001056: RNA polymerase III activity | 3.44E-03 |
| 15 | GO:0015266: protein channel activity | 3.76E-03 |
| 16 | GO:0051087: chaperone binding | 5.46E-03 |
| 17 | GO:0005507: copper ion binding | 1.15E-02 |
| 18 | GO:0046872: metal ion binding | 2.02E-02 |
| 19 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.35E-02 |
| 20 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.60E-02 |
| 21 | GO:0051082: unfolded protein binding | 3.34E-02 |
| 22 | GO:0008565: protein transporter activity | 4.46E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043186: P granule | 0.00E+00 |
| 2 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 3 | GO:0022625: cytosolic large ribosomal subunit | 4.72E-66 |
| 4 | GO:0022626: cytosolic ribosome | 5.77E-63 |
| 5 | GO:0005840: ribosome | 3.97E-60 |
| 6 | GO:0022627: cytosolic small ribosomal subunit | 1.60E-37 |
| 7 | GO:0005730: nucleolus | 2.51E-29 |
| 8 | GO:0005737: cytoplasm | 7.32E-24 |
| 9 | GO:0009506: plasmodesma | 4.24E-22 |
| 10 | GO:0005829: cytosol | 8.81E-19 |
| 11 | GO:0015934: large ribosomal subunit | 4.13E-15 |
| 12 | GO:0016020: membrane | 2.76E-09 |
| 13 | GO:0005774: vacuolar membrane | 5.45E-08 |
| 14 | GO:0015935: small ribosomal subunit | 1.73E-07 |
| 15 | GO:0005773: vacuole | 4.03E-06 |
| 16 | GO:0005618: cell wall | 7.98E-06 |
| 17 | GO:0005742: mitochondrial outer membrane translocase complex | 6.66E-05 |
| 18 | GO:0030686: 90S preribosome | 9.50E-05 |
| 19 | GO:0005886: plasma membrane | 1.32E-04 |
| 20 | GO:0005758: mitochondrial intermembrane space | 3.00E-04 |
| 21 | GO:0034719: SMN-Sm protein complex | 3.73E-04 |
| 22 | GO:0005682: U5 snRNP | 7.14E-04 |
| 23 | GO:0005687: U4 snRNP | 9.02E-04 |
| 24 | GO:0097526: spliceosomal tri-snRNP complex | 9.02E-04 |
| 25 | GO:0005689: U12-type spliceosomal complex | 1.31E-03 |
| 26 | GO:0071004: U2-type prespliceosome | 1.78E-03 |
| 27 | GO:0046930: pore complex | 2.03E-03 |
| 28 | GO:0005763: mitochondrial small ribosomal subunit | 2.29E-03 |
| 29 | GO:0005736: DNA-directed RNA polymerase I complex | 2.29E-03 |
| 30 | GO:0005685: U1 snRNP | 2.29E-03 |
| 31 | GO:0005666: DNA-directed RNA polymerase III complex | 2.56E-03 |
| 32 | GO:0071011: precatalytic spliceosome | 2.56E-03 |
| 33 | GO:0000418: DNA-directed RNA polymerase IV complex | 2.85E-03 |
| 34 | GO:0005686: U2 snRNP | 2.85E-03 |
| 35 | GO:0071013: catalytic step 2 spliceosome | 3.14E-03 |
| 36 | GO:0005743: mitochondrial inner membrane | 3.25E-03 |
| 37 | GO:0009507: chloroplast | 3.31E-03 |
| 38 | GO:0005665: DNA-directed RNA polymerase II, core complex | 3.44E-03 |
| 39 | GO:0005622: intracellular | 3.45E-03 |
| 40 | GO:0019013: viral nucleocapsid | 3.76E-03 |
| 41 | GO:0005741: mitochondrial outer membrane | 5.83E-03 |
| 42 | GO:0030529: intracellular ribonucleoprotein complex | 1.23E-02 |
| 43 | GO:0005681: spliceosomal complex | 2.93E-02 |
| 44 | GO:0005732: small nucleolar ribonucleoprotein complex | 3.56E-02 |
| 45 | GO:0005759: mitochondrial matrix | 4.61E-02 |