Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G56340

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0044843: cell cycle G1/S phase transition0.00E+00
2GO:0009967: positive regulation of signal transduction0.00E+00
3GO:0006412: translation7.57E-129
4GO:0042254: ribosome biogenesis5.88E-50
5GO:0000027: ribosomal large subunit assembly1.87E-09
6GO:0071215: cellular response to abscisic acid stimulus2.42E-05
7GO:0006407: rRNA export from nucleus1.14E-04
8GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.14E-04
9GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.14E-04
10GO:0048569: post-embryonic animal organ development2.65E-04
11GO:1902626: assembly of large subunit precursor of preribosome4.38E-04
12GO:0002181: cytoplasmic translation4.38E-04
13GO:0010476: gibberellin mediated signaling pathway4.38E-04
14GO:0042256: mature ribosome assembly4.38E-04
15GO:0042274: ribosomal small subunit biogenesis8.35E-04
16GO:0009845: seed germination9.65E-04
17GO:0000470: maturation of LSU-rRNA1.29E-03
18GO:0009955: adaxial/abaxial pattern specification1.54E-03
19GO:0000911: cytokinesis by cell plate formation1.54E-03
20GO:0009735: response to cytokinin1.83E-03
21GO:0000028: ribosomal small subunit assembly2.09E-03
22GO:0001558: regulation of cell growth2.39E-03
23GO:0009409: response to cold2.47E-03
24GO:0009644: response to high light intensity2.96E-03
25GO:0006364: rRNA processing3.68E-03
26GO:0006414: translational elongation3.84E-03
27GO:0006417: regulation of translation4.06E-03
28GO:0010229: inflorescence development4.43E-03
29GO:0010102: lateral root morphogenesis4.43E-03
30GO:0048367: shoot system development4.48E-03
31GO:0051302: regulation of cell division6.45E-03
32GO:0040007: growth7.79E-03
33GO:0009749: response to glucose1.08E-02
34GO:0009791: post-embryonic development1.08E-02
35GO:0010090: trichome morphogenesis1.24E-02
36GO:0009793: embryo development ending in seed dormancy2.16E-02
37GO:0048364: root development2.67E-02
38GO:0009965: leaf morphogenesis2.72E-02
RankGO TermAdjusted P value
1GO:0005078: MAP-kinase scaffold activity0.00E+00
2GO:0003735: structural constituent of ribosome2.96E-155
3GO:0003729: mRNA binding4.22E-30
4GO:0019843: rRNA binding9.86E-14
5GO:0032947: protein complex scaffold4.38E-04
6GO:0070181: small ribosomal subunit rRNA binding4.38E-04
7GO:0008235: metalloexopeptidase activity1.81E-03
8GO:0004871: signal transducer activity3.95E-03
9GO:0003723: RNA binding6.73E-03
10GO:0000166: nucleotide binding1.01E-02
RankGO TermAdjusted P value
1GO:0022626: cytosolic ribosome7.58E-102
2GO:0005840: ribosome1.26E-93
3GO:0022625: cytosolic large ribosomal subunit2.46E-90
4GO:0022627: cytosolic small ribosomal subunit9.90E-56
5GO:0005737: cytoplasm1.87E-37
6GO:0005730: nucleolus2.24E-29
7GO:0005829: cytosol2.59E-27
8GO:0009506: plasmodesma7.72E-23
9GO:0005774: vacuolar membrane1.95E-17
10GO:0015934: large ribosomal subunit1.31E-14
11GO:0015935: small ribosomal subunit2.00E-13
12GO:0016020: membrane1.72E-10
13GO:0005618: cell wall5.05E-09
14GO:0005886: plasma membrane2.14E-06
15GO:0005773: vacuole1.26E-05
16GO:0030686: 90S preribosome1.14E-04
17GO:0009507: chloroplast2.19E-04
18GO:0005622: intracellular1.15E-03
19GO:0005834: heterotrimeric G-protein complex4.62E-03
20GO:0030529: intracellular ribonucleoprotein complex1.46E-02
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Gene type



Gene DE type