Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G55980

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0051245: negative regulation of cellular defense response0.00E+00
2GO:0070212: protein poly-ADP-ribosylation0.00E+00
3GO:0045792: negative regulation of cell size0.00E+00
4GO:1900367: positive regulation of defense response to insect0.00E+00
5GO:0072660: maintenance of protein location in plasma membrane0.00E+00
6GO:0071327: cellular response to trehalose stimulus0.00E+00
7GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
8GO:0042742: defense response to bacterium4.34E-11
9GO:0010200: response to chitin4.74E-10
10GO:0009617: response to bacterium2.52E-09
11GO:0080142: regulation of salicylic acid biosynthetic process8.14E-09
12GO:0009816: defense response to bacterium, incompatible interaction9.68E-09
13GO:0050832: defense response to fungus1.69E-07
14GO:0048281: inflorescence morphogenesis8.71E-07
15GO:0006612: protein targeting to membrane2.09E-06
16GO:0051707: response to other organism3.32E-06
17GO:0010363: regulation of plant-type hypersensitive response4.03E-06
18GO:0060548: negative regulation of cell death4.03E-06
19GO:0031348: negative regulation of defense response5.50E-06
20GO:0009626: plant-type hypersensitive response1.03E-05
21GO:0009759: indole glucosinolate biosynthetic process1.04E-05
22GO:0061025: membrane fusion1.26E-05
23GO:0009612: response to mechanical stimulus1.50E-05
24GO:0070370: cellular heat acclimation2.06E-05
25GO:0043562: cellular response to nitrogen levels3.49E-05
26GO:2000031: regulation of salicylic acid mediated signaling pathway3.49E-05
27GO:0007166: cell surface receptor signaling pathway5.11E-05
28GO:0009609: response to symbiotic bacterium6.26E-05
29GO:1901183: positive regulation of camalexin biosynthetic process6.26E-05
30GO:0043069: negative regulation of programmed cell death6.42E-05
31GO:0009682: induced systemic resistance7.62E-05
32GO:0052544: defense response by callose deposition in cell wall7.62E-05
33GO:0006887: exocytosis8.32E-05
34GO:0002213: defense response to insect8.91E-05
35GO:0034605: cellular response to heat1.18E-04
36GO:0070588: calcium ion transmembrane transport1.34E-04
37GO:0006212: uracil catabolic process1.52E-04
38GO:0019483: beta-alanine biosynthetic process1.52E-04
39GO:0002221: pattern recognition receptor signaling pathway1.52E-04
40GO:0015914: phospholipid transport1.52E-04
41GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.52E-04
42GO:0080185: effector dependent induction by symbiont of host immune response1.52E-04
43GO:0010618: aerenchyma formation1.52E-04
44GO:0009651: response to salt stress1.61E-04
45GO:0009863: salicylic acid mediated signaling pathway1.69E-04
46GO:0048278: vesicle docking2.08E-04
47GO:2000022: regulation of jasmonic acid mediated signaling pathway2.29E-04
48GO:0071456: cellular response to hypoxia2.29E-04
49GO:0009751: response to salicylic acid2.48E-04
50GO:0009625: response to insect2.51E-04
51GO:0010581: regulation of starch biosynthetic process2.57E-04
52GO:1900140: regulation of seedling development2.57E-04
53GO:0072661: protein targeting to plasma membrane2.57E-04
54GO:0006468: protein phosphorylation3.05E-04
55GO:0043207: response to external biotic stimulus3.73E-04
56GO:0010148: transpiration3.73E-04
57GO:0034219: carbohydrate transmembrane transport3.73E-04
58GO:0010508: positive regulation of autophagy4.99E-04
59GO:0010483: pollen tube reception4.99E-04
60GO:0009652: thigmotropism4.99E-04
61GO:0009697: salicylic acid biosynthetic process6.32E-04
62GO:0010225: response to UV-C6.32E-04
63GO:0006906: vesicle fusion6.80E-04
64GO:0009627: systemic acquired resistance6.80E-04
65GO:0010942: positive regulation of cell death7.73E-04
66GO:0009407: toxin catabolic process8.67E-04
67GO:0010119: regulation of stomatal movement9.06E-04
68GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response9.20E-04
69GO:0000911: cytokinesis by cell plate formation9.20E-04
70GO:0010310: regulation of hydrogen peroxide metabolic process9.20E-04
71GO:0009867: jasmonic acid mediated signaling pathway9.88E-04
72GO:0050829: defense response to Gram-negative bacterium1.07E-03
73GO:0010044: response to aluminum ion1.07E-03
74GO:0009610: response to symbiotic fungus1.07E-03
75GO:0071446: cellular response to salicylic acid stimulus1.07E-03
76GO:0016192: vesicle-mediated transport1.15E-03
77GO:0030162: regulation of proteolysis1.24E-03
78GO:0009737: response to abscisic acid1.32E-03
79GO:0009636: response to toxic substance1.41E-03
80GO:0010497: plasmodesmata-mediated intercellular transport1.41E-03
81GO:0010120: camalexin biosynthetic process1.41E-03
82GO:0010112: regulation of systemic acquired resistance1.58E-03
83GO:0006486: protein glycosylation1.68E-03
84GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.77E-03
85GO:2000280: regulation of root development1.77E-03
86GO:1900426: positive regulation of defense response to bacterium1.77E-03
87GO:0006979: response to oxidative stress1.82E-03
88GO:0006995: cellular response to nitrogen starvation1.96E-03
89GO:0009870: defense response signaling pathway, resistance gene-dependent1.96E-03
90GO:0006032: chitin catabolic process1.96E-03
91GO:0010215: cellulose microfibril organization1.96E-03
92GO:0006952: defense response1.97E-03
93GO:0009620: response to fungus2.17E-03
94GO:0010105: negative regulation of ethylene-activated signaling pathway2.37E-03
95GO:0000266: mitochondrial fission2.37E-03
96GO:0009742: brassinosteroid mediated signaling pathway2.51E-03
97GO:0006807: nitrogen compound metabolic process2.58E-03
98GO:0002237: response to molecule of bacterial origin2.80E-03
99GO:0009266: response to temperature stimulus2.80E-03
100GO:0042343: indole glucosinolate metabolic process3.03E-03
101GO:0009969: xyloglucan biosynthetic process3.03E-03
102GO:0016998: cell wall macromolecule catabolic process3.98E-03
103GO:0010150: leaf senescence4.06E-03
104GO:0035428: hexose transmembrane transport4.24E-03
105GO:0009814: defense response, incompatible interaction4.24E-03
106GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.54E-03
107GO:0010197: polar nucleus fusion5.59E-03
108GO:0046323: glucose import5.59E-03
109GO:0009646: response to absence of light5.88E-03
110GO:0008654: phospholipid biosynthetic process6.17E-03
111GO:0010193: response to ozone6.46E-03
112GO:0000302: response to reactive oxygen species6.46E-03
113GO:0006970: response to osmotic stress6.75E-03
114GO:0016032: viral process6.76E-03
115GO:0009723: response to ethylene7.25E-03
116GO:0019760: glucosinolate metabolic process7.38E-03
117GO:0006904: vesicle docking involved in exocytosis7.70E-03
118GO:0051607: defense response to virus8.02E-03
119GO:0001666: response to hypoxia8.35E-03
120GO:0009414: response to water deprivation8.62E-03
121GO:0006886: intracellular protein transport9.61E-03
122GO:0016049: cell growth9.70E-03
123GO:0009817: defense response to fungus, incompatible interaction1.01E-02
124GO:0008219: cell death1.01E-02
125GO:0009832: plant-type cell wall biogenesis1.04E-02
126GO:0007568: aging1.11E-02
127GO:0009753: response to jasmonic acid1.23E-02
128GO:0009409: response to cold1.31E-02
129GO:0009965: leaf morphogenesis1.54E-02
130GO:0031347: regulation of defense response1.63E-02
131GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.63E-02
132GO:0048367: shoot system development2.02E-02
133GO:0018105: peptidyl-serine phosphorylation2.30E-02
134GO:0040008: regulation of growth3.22E-02
135GO:0009739: response to gibberellin3.60E-02
136GO:0009826: unidimensional cell growth4.42E-02
137GO:0030154: cell differentiation4.49E-02
138GO:0009733: response to auxin4.63E-02
139GO:0007049: cell cycle4.91E-02
RankGO TermAdjusted P value
1GO:0003837: beta-ureidopropionase activity0.00E+00
2GO:0004168: dolichol kinase activity0.00E+00
3GO:0015370: solute:sodium symporter activity0.00E+00
4GO:0005516: calmodulin binding1.74E-06
5GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.45E-05
6GO:0080042: ADP-glucose pyrophosphohydrolase activity6.26E-05
7GO:2001147: camalexin binding6.26E-05
8GO:0031127: alpha-(1,2)-fucosyltransferase activity6.26E-05
9GO:2001227: quercitrin binding6.26E-05
10GO:1901149: salicylic acid binding6.26E-05
11GO:0005484: SNAP receptor activity9.40E-05
12GO:0005388: calcium-transporting ATPase activity1.03E-04
13GO:0017110: nucleoside-diphosphatase activity1.52E-04
14GO:0080041: ADP-ribose pyrophosphohydrolase activity1.52E-04
15GO:0033612: receptor serine/threonine kinase binding2.08E-04
16GO:0016595: glutamate binding2.57E-04
17GO:0043565: sequence-specific DNA binding4.45E-04
18GO:0043495: protein anchor4.99E-04
19GO:0015204: urea transmembrane transporter activity4.99E-04
20GO:0047631: ADP-ribose diphosphatase activity6.32E-04
21GO:0000210: NAD+ diphosphatase activity7.73E-04
22GO:0004605: phosphatidate cytidylyltransferase activity7.73E-04
23GO:0043295: glutathione binding1.07E-03
24GO:0000149: SNARE binding1.07E-03
25GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity1.07E-03
26GO:0004364: glutathione transferase activity1.21E-03
27GO:0004714: transmembrane receptor protein tyrosine kinase activity1.24E-03
28GO:0008417: fucosyltransferase activity1.58E-03
29GO:0031625: ubiquitin protein ligase binding1.85E-03
30GO:0004568: chitinase activity1.96E-03
31GO:0005262: calcium channel activity2.58E-03
32GO:0051119: sugar transmembrane transporter activity3.03E-03
33GO:0005515: protein binding3.25E-03
34GO:0043424: protein histidine kinase binding3.74E-03
35GO:0001085: RNA polymerase II transcription factor binding5.59E-03
36GO:0005355: glucose transmembrane transporter activity5.88E-03
37GO:0016301: kinase activity5.98E-03
38GO:0005524: ATP binding7.30E-03
39GO:0044212: transcription regulatory region DNA binding8.89E-03
40GO:0009931: calcium-dependent protein serine/threonine kinase activity9.01E-03
41GO:0004806: triglyceride lipase activity9.36E-03
42GO:0004683: calmodulin-dependent protein kinase activity9.36E-03
43GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.01E-02
44GO:0004222: metalloendopeptidase activity1.08E-02
45GO:0050897: cobalt ion binding1.11E-02
46GO:0030145: manganese ion binding1.11E-02
47GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding1.11E-02
48GO:0003700: transcription factor activity, sequence-specific DNA binding1.31E-02
49GO:0015293: symporter activity1.54E-02
50GO:0051287: NAD binding1.63E-02
51GO:0016298: lipase activity1.80E-02
52GO:0045735: nutrient reservoir activity1.98E-02
53GO:0022857: transmembrane transporter activity2.16E-02
54GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding2.90E-02
55GO:0019825: oxygen binding2.91E-02
56GO:0015144: carbohydrate transmembrane transporter activity3.01E-02
57GO:0005351: sugar:proton symporter activity3.27E-02
58GO:0008017: microtubule binding3.44E-02
59GO:0005509: calcium ion binding3.81E-02
60GO:0005506: iron ion binding4.07E-02
61GO:0003682: chromatin binding4.72E-02
62GO:0043531: ADP binding4.84E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane2.52E-10
2GO:0009506: plasmodesma4.57E-09
3GO:0005901: caveola1.52E-04
4GO:0005774: vacuolar membrane1.75E-04
5GO:0016021: integral component of membrane1.85E-04
6GO:0030658: transport vesicle membrane3.73E-04
7GO:0070062: extracellular exosome3.73E-04
8GO:0009504: cell plate3.99E-04
9GO:0031201: SNARE complex1.16E-03
10GO:0031012: extracellular matrix2.58E-03
11GO:0005887: integral component of plasma membrane2.59E-03
12GO:0030176: integral component of endoplasmic reticulum membrane3.03E-03
13GO:0016020: membrane5.06E-03
14GO:0005773: vacuole6.51E-03
15GO:0000145: exocyst6.76E-03
16GO:0032580: Golgi cisterna membrane7.38E-03
17GO:0005667: transcription factor complex9.01E-03
18GO:0000151: ubiquitin ligase complex1.01E-02
19GO:0019005: SCF ubiquitin ligase complex1.01E-02
20GO:0031902: late endosome membrane1.34E-02
21GO:0005794: Golgi apparatus1.93E-02
22GO:0012505: endomembrane system2.21E-02
23GO:0009706: chloroplast inner membrane2.25E-02
24GO:0009524: phragmoplast2.75E-02
25GO:0031225: anchored component of membrane3.19E-02
26GO:0005802: trans-Golgi network3.28E-02
27GO:0005783: endoplasmic reticulum3.35E-02
28GO:0046658: anchored component of plasma membrane4.06E-02
29GO:0005618: cell wall4.98E-02
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Gene type



Gene DE type