GO Enrichment Analysis of Co-expressed Genes with
AT3G55630
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 2 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.84E-05 |
| 3 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.24E-05 |
| 4 | GO:0006412: translation | 4.22E-05 |
| 5 | GO:0090351: seedling development | 4.92E-05 |
| 6 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 7.88E-05 |
| 7 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 7.88E-05 |
| 8 | GO:0034755: iron ion transmembrane transport | 7.88E-05 |
| 9 | GO:0005977: glycogen metabolic process | 1.37E-04 |
| 10 | GO:0006011: UDP-glucose metabolic process | 1.37E-04 |
| 11 | GO:0006000: fructose metabolic process | 1.37E-04 |
| 12 | GO:1902476: chloride transmembrane transport | 2.04E-04 |
| 13 | GO:0071483: cellular response to blue light | 2.76E-04 |
| 14 | GO:0015995: chlorophyll biosynthetic process | 3.00E-04 |
| 15 | GO:0010942: positive regulation of cell death | 4.34E-04 |
| 16 | GO:0032973: amino acid export | 4.34E-04 |
| 17 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 5.20E-04 |
| 18 | GO:0006821: chloride transport | 6.07E-04 |
| 19 | GO:0043090: amino acid import | 6.07E-04 |
| 20 | GO:0052543: callose deposition in cell wall | 6.99E-04 |
| 21 | GO:0032544: plastid translation | 7.94E-04 |
| 22 | GO:0006002: fructose 6-phosphate metabolic process | 7.94E-04 |
| 23 | GO:0071482: cellular response to light stimulus | 7.94E-04 |
| 24 | GO:0009821: alkaloid biosynthetic process | 8.92E-04 |
| 25 | GO:0080144: amino acid homeostasis | 8.92E-04 |
| 26 | GO:0006783: heme biosynthetic process | 8.92E-04 |
| 27 | GO:0010205: photoinhibition | 9.92E-04 |
| 28 | GO:0009299: mRNA transcription | 1.10E-03 |
| 29 | GO:0006879: cellular iron ion homeostasis | 1.20E-03 |
| 30 | GO:0006352: DNA-templated transcription, initiation | 1.20E-03 |
| 31 | GO:0009750: response to fructose | 1.20E-03 |
| 32 | GO:0009698: phenylpropanoid metabolic process | 1.20E-03 |
| 33 | GO:0015706: nitrate transport | 1.31E-03 |
| 34 | GO:0005983: starch catabolic process | 1.31E-03 |
| 35 | GO:0045037: protein import into chloroplast stroma | 1.31E-03 |
| 36 | GO:0009725: response to hormone | 1.43E-03 |
| 37 | GO:0006094: gluconeogenesis | 1.43E-03 |
| 38 | GO:0005986: sucrose biosynthetic process | 1.43E-03 |
| 39 | GO:0010167: response to nitrate | 1.67E-03 |
| 40 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.79E-03 |
| 41 | GO:0031408: oxylipin biosynthetic process | 2.19E-03 |
| 42 | GO:0006730: one-carbon metabolic process | 2.32E-03 |
| 43 | GO:0016311: dephosphorylation | 5.23E-03 |
| 44 | GO:0009853: photorespiration | 6.38E-03 |
| 45 | GO:0006839: mitochondrial transport | 6.98E-03 |
| 46 | GO:0009735: response to cytokinin | 7.61E-03 |
| 47 | GO:0009740: gibberellic acid mediated signaling pathway | 1.15E-02 |
| 48 | GO:0042545: cell wall modification | 1.17E-02 |
| 49 | GO:0009742: brassinosteroid mediated signaling pathway | 1.25E-02 |
| 50 | GO:0009058: biosynthetic process | 1.46E-02 |
| 51 | GO:0009790: embryo development | 1.57E-02 |
| 52 | GO:0040008: regulation of growth | 1.71E-02 |
| 53 | GO:0045490: pectin catabolic process | 1.77E-02 |
| 54 | GO:0009451: RNA modification | 1.80E-02 |
| 55 | GO:0045944: positive regulation of transcription from RNA polymerase II promoter | 2.28E-02 |
| 56 | GO:0009826: unidimensional cell growth | 2.34E-02 |
| 57 | GO:0009658: chloroplast organization | 2.41E-02 |
| 58 | GO:0042254: ribosome biogenesis | 2.44E-02 |
| 59 | GO:0010200: response to chitin | 2.88E-02 |
| 60 | GO:0015979: photosynthesis | 3.09E-02 |
| 61 | GO:0009737: response to abscisic acid | 3.61E-02 |
| 62 | GO:0006629: lipid metabolic process | 3.71E-02 |
| 63 | GO:0009753: response to jasmonic acid | 3.90E-02 |
| 64 | GO:0009793: embryo development ending in seed dormancy | 3.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 2 | GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity | 0.00E+00 |
| 3 | GO:0019843: rRNA binding | 1.02E-09 |
| 4 | GO:0003735: structural constituent of ribosome | 2.66E-05 |
| 5 | GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity | 3.12E-05 |
| 6 | GO:0004655: porphobilinogen synthase activity | 3.12E-05 |
| 7 | GO:0009671: nitrate:proton symporter activity | 3.12E-05 |
| 8 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 7.88E-05 |
| 9 | GO:0043425: bHLH transcription factor binding | 7.88E-05 |
| 10 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 7.88E-05 |
| 11 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 7.88E-05 |
| 12 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 7.88E-05 |
| 13 | GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity | 1.37E-04 |
| 14 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 2.76E-04 |
| 15 | GO:0005253: anion channel activity | 2.76E-04 |
| 16 | GO:0001053: plastid sigma factor activity | 2.76E-04 |
| 17 | GO:0016987: sigma factor activity | 2.76E-04 |
| 18 | GO:0008374: O-acyltransferase activity | 3.53E-04 |
| 19 | GO:0005247: voltage-gated chloride channel activity | 4.34E-04 |
| 20 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.24E-04 |
| 21 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 7.94E-04 |
| 22 | GO:0016844: strictosidine synthase activity | 9.92E-04 |
| 23 | GO:0015112: nitrate transmembrane transporter activity | 9.92E-04 |
| 24 | GO:0005381: iron ion transmembrane transporter activity | 9.92E-04 |
| 25 | GO:0008266: poly(U) RNA binding | 1.55E-03 |
| 26 | GO:0008146: sulfotransferase activity | 1.67E-03 |
| 27 | GO:0005528: FK506 binding | 1.92E-03 |
| 28 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 5.23E-03 |
| 29 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 6.58E-03 |
| 30 | GO:0004185: serine-type carboxypeptidase activity | 7.60E-03 |
| 31 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 9.36E-03 |
| 32 | GO:0015171: amino acid transmembrane transporter activity | 1.01E-02 |
| 33 | GO:0045330: aspartyl esterase activity | 1.01E-02 |
| 34 | GO:0030599: pectinesterase activity | 1.15E-02 |
| 35 | GO:0004252: serine-type endopeptidase activity | 1.51E-02 |
| 36 | GO:0008565: protein transporter activity | 1.60E-02 |
| 37 | GO:0046910: pectinesterase inhibitor activity | 1.68E-02 |
| 38 | GO:0046983: protein dimerization activity | 2.26E-02 |
| 39 | GO:0046982: protein heterodimerization activity | 2.38E-02 |
| 40 | GO:0016788: hydrolase activity, acting on ester bonds | 2.44E-02 |
| 41 | GO:0004519: endonuclease activity | 3.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 7.61E-10 |
| 3 | GO:0009941: chloroplast envelope | 2.45E-07 |
| 4 | GO:0000312: plastid small ribosomal subunit | 3.66E-07 |
| 5 | GO:0009570: chloroplast stroma | 1.03E-05 |
| 6 | GO:0009547: plastid ribosome | 3.12E-05 |
| 7 | GO:0009534: chloroplast thylakoid | 2.00E-04 |
| 8 | GO:0042646: plastid nucleoid | 2.04E-04 |
| 9 | GO:0022627: cytosolic small ribosomal subunit | 2.15E-04 |
| 10 | GO:0009535: chloroplast thylakoid membrane | 2.82E-04 |
| 11 | GO:0034707: chloride channel complex | 4.34E-04 |
| 12 | GO:0005840: ribosome | 4.92E-04 |
| 13 | GO:0016363: nuclear matrix | 5.20E-04 |
| 14 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 8.92E-04 |
| 15 | GO:0009543: chloroplast thylakoid lumen | 1.24E-03 |
| 16 | GO:0000311: plastid large ribosomal subunit | 1.31E-03 |
| 17 | GO:0019013: viral nucleocapsid | 1.43E-03 |
| 18 | GO:0009579: thylakoid | 1.46E-03 |
| 19 | GO:0031969: chloroplast membrane | 3.20E-03 |
| 20 | GO:0009536: plastid | 3.67E-03 |
| 21 | GO:0009295: nucleoid | 4.17E-03 |
| 22 | GO:0005773: vacuole | 5.69E-03 |
| 23 | GO:0016020: membrane | 9.61E-03 |
| 24 | GO:0009706: chloroplast inner membrane | 1.20E-02 |
| 25 | GO:0005774: vacuolar membrane | 1.37E-02 |
| 26 | GO:0005623: cell | 1.43E-02 |
| 27 | GO:0005622: intracellular | 1.48E-02 |
| 28 | GO:0005759: mitochondrial matrix | 1.65E-02 |
| 29 | GO:0009705: plant-type vacuole membrane | 1.77E-02 |
| 30 | GO:0005743: mitochondrial inner membrane | 3.52E-02 |
| 31 | GO:0043231: intracellular membrane-bounded organelle | 3.97E-02 |