GO Enrichment Analysis of Co-expressed Genes with
AT3G55610
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045176: apical protein localization | 0.00E+00 |
| 2 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
| 3 | GO:1904526: regulation of microtubule binding | 0.00E+00 |
| 4 | GO:0006003: fructose 2,6-bisphosphate metabolic process | 0.00E+00 |
| 5 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
| 6 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 7 | GO:0007623: circadian rhythm | 7.12E-05 |
| 8 | GO:0015808: L-alanine transport | 7.90E-05 |
| 9 | GO:0010480: microsporocyte differentiation | 7.90E-05 |
| 10 | GO:0031338: regulation of vesicle fusion | 7.90E-05 |
| 11 | GO:0043609: regulation of carbon utilization | 7.90E-05 |
| 12 | GO:0010028: xanthophyll cycle | 7.90E-05 |
| 13 | GO:0015969: guanosine tetraphosphate metabolic process | 7.90E-05 |
| 14 | GO:0098712: L-glutamate import across plasma membrane | 1.89E-04 |
| 15 | GO:0016122: xanthophyll metabolic process | 1.89E-04 |
| 16 | GO:0015804: neutral amino acid transport | 1.89E-04 |
| 17 | GO:0051262: protein tetramerization | 1.89E-04 |
| 18 | GO:0090630: activation of GTPase activity | 3.17E-04 |
| 19 | GO:0006000: fructose metabolic process | 3.17E-04 |
| 20 | GO:1901332: negative regulation of lateral root development | 4.58E-04 |
| 21 | GO:0046836: glycolipid transport | 4.58E-04 |
| 22 | GO:0051639: actin filament network formation | 4.58E-04 |
| 23 | GO:0080170: hydrogen peroxide transmembrane transport | 4.58E-04 |
| 24 | GO:0051764: actin crosslink formation | 6.09E-04 |
| 25 | GO:0015994: chlorophyll metabolic process | 6.09E-04 |
| 26 | GO:0006552: leucine catabolic process | 6.09E-04 |
| 27 | GO:0071805: potassium ion transmembrane transport | 7.35E-04 |
| 28 | GO:0010438: cellular response to sulfur starvation | 7.72E-04 |
| 29 | GO:0009759: indole glucosinolate biosynthetic process | 9.42E-04 |
| 30 | GO:0048827: phyllome development | 9.42E-04 |
| 31 | GO:0042549: photosystem II stabilization | 9.42E-04 |
| 32 | GO:0045926: negative regulation of growth | 1.12E-03 |
| 33 | GO:0009942: longitudinal axis specification | 1.12E-03 |
| 34 | GO:0043090: amino acid import | 1.31E-03 |
| 35 | GO:0048437: floral organ development | 1.31E-03 |
| 36 | GO:0070413: trehalose metabolism in response to stress | 1.51E-03 |
| 37 | GO:0006002: fructose 6-phosphate metabolic process | 1.72E-03 |
| 38 | GO:0006098: pentose-phosphate shunt | 1.95E-03 |
| 39 | GO:0048507: meristem development | 1.95E-03 |
| 40 | GO:0006813: potassium ion transport | 2.27E-03 |
| 41 | GO:0006535: cysteine biosynthetic process from serine | 2.41E-03 |
| 42 | GO:0045036: protein targeting to chloroplast | 2.41E-03 |
| 43 | GO:1903507: negative regulation of nucleic acid-templated transcription | 2.66E-03 |
| 44 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.66E-03 |
| 45 | GO:0048229: gametophyte development | 2.66E-03 |
| 46 | GO:0046856: phosphatidylinositol dephosphorylation | 2.66E-03 |
| 47 | GO:0005983: starch catabolic process | 2.92E-03 |
| 48 | GO:0002213: defense response to insect | 2.92E-03 |
| 49 | GO:0010229: inflorescence development | 3.18E-03 |
| 50 | GO:0010075: regulation of meristem growth | 3.18E-03 |
| 51 | GO:0006094: gluconeogenesis | 3.18E-03 |
| 52 | GO:0010540: basipetal auxin transport | 3.45E-03 |
| 53 | GO:0009934: regulation of meristem structural organization | 3.45E-03 |
| 54 | GO:0006833: water transport | 4.02E-03 |
| 55 | GO:0000162: tryptophan biosynthetic process | 4.02E-03 |
| 56 | GO:0051017: actin filament bundle assembly | 4.31E-03 |
| 57 | GO:0005992: trehalose biosynthetic process | 4.31E-03 |
| 58 | GO:0019344: cysteine biosynthetic process | 4.31E-03 |
| 59 | GO:0016575: histone deacetylation | 4.61E-03 |
| 60 | GO:0061077: chaperone-mediated protein folding | 4.92E-03 |
| 61 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 5.24E-03 |
| 62 | GO:0080092: regulation of pollen tube growth | 5.24E-03 |
| 63 | GO:0005975: carbohydrate metabolic process | 5.44E-03 |
| 64 | GO:0034220: ion transmembrane transport | 6.57E-03 |
| 65 | GO:0010051: xylem and phloem pattern formation | 6.57E-03 |
| 66 | GO:0048653: anther development | 6.57E-03 |
| 67 | GO:0006662: glycerol ether metabolic process | 6.92E-03 |
| 68 | GO:0010305: leaf vascular tissue pattern formation | 6.92E-03 |
| 69 | GO:0048825: cotyledon development | 7.64E-03 |
| 70 | GO:0009791: post-embryonic development | 7.64E-03 |
| 71 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 8.01E-03 |
| 72 | GO:1901657: glycosyl compound metabolic process | 8.77E-03 |
| 73 | GO:0001666: response to hypoxia | 1.04E-02 |
| 74 | GO:0009911: positive regulation of flower development | 1.04E-02 |
| 75 | GO:0080167: response to karrikin | 1.06E-02 |
| 76 | GO:0010029: regulation of seed germination | 1.08E-02 |
| 77 | GO:0009816: defense response to bacterium, incompatible interaction | 1.08E-02 |
| 78 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.10E-02 |
| 79 | GO:0009414: response to water deprivation | 1.28E-02 |
| 80 | GO:0010311: lateral root formation | 1.29E-02 |
| 81 | GO:0006499: N-terminal protein myristoylation | 1.34E-02 |
| 82 | GO:0006811: ion transport | 1.34E-02 |
| 83 | GO:0032259: methylation | 1.50E-02 |
| 84 | GO:0034599: cellular response to oxidative stress | 1.52E-02 |
| 85 | GO:0006631: fatty acid metabolic process | 1.67E-02 |
| 86 | GO:0008152: metabolic process | 1.73E-02 |
| 87 | GO:0051707: response to other organism | 1.77E-02 |
| 88 | GO:0031347: regulation of defense response | 2.02E-02 |
| 89 | GO:0006364: rRNA processing | 2.19E-02 |
| 90 | GO:0009734: auxin-activated signaling pathway | 2.21E-02 |
| 91 | GO:0006096: glycolytic process | 2.46E-02 |
| 92 | GO:0009908: flower development | 2.52E-02 |
| 93 | GO:0009624: response to nematode | 2.81E-02 |
| 94 | GO:0009742: brassinosteroid mediated signaling pathway | 2.93E-02 |
| 95 | GO:0006457: protein folding | 3.61E-02 |
| 96 | GO:0009790: embryo development | 3.68E-02 |
| 97 | GO:0006633: fatty acid biosynthetic process | 3.88E-02 |
| 98 | GO:0006413: translational initiation | 3.94E-02 |
| 99 | GO:0010228: vegetative to reproductive phase transition of meristem | 4.28E-02 |
| 100 | GO:0006470: protein dephosphorylation | 4.56E-02 |
| 101 | GO:0007166: cell surface receptor signaling pathway | 4.56E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity | 0.00E+00 |
| 2 | GO:0003873: 6-phosphofructo-2-kinase activity | 0.00E+00 |
| 3 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 4 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 5 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 6 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 7 | GO:0051861: glycolipid binding | 6.01E-06 |
| 8 | GO:0030941: chloroplast targeting sequence binding | 7.90E-05 |
| 9 | GO:0004485: methylcrotonoyl-CoA carboxylase activity | 7.90E-05 |
| 10 | GO:0050139: nicotinate-N-glucosyltransferase activity | 7.90E-05 |
| 11 | GO:0005227: calcium activated cation channel activity | 7.90E-05 |
| 12 | GO:0015194: L-serine transmembrane transporter activity | 7.90E-05 |
| 13 | GO:0004565: beta-galactosidase activity | 1.45E-04 |
| 14 | GO:0008728: GTP diphosphokinase activity | 1.89E-04 |
| 15 | GO:0015180: L-alanine transmembrane transporter activity | 1.89E-04 |
| 16 | GO:0050017: L-3-cyanoalanine synthase activity | 1.89E-04 |
| 17 | GO:0016868: intramolecular transferase activity, phosphotransferases | 1.89E-04 |
| 18 | GO:0015079: potassium ion transmembrane transporter activity | 2.59E-04 |
| 19 | GO:0015193: L-proline transmembrane transporter activity | 3.17E-04 |
| 20 | GO:0004075: biotin carboxylase activity | 3.17E-04 |
| 21 | GO:0048487: beta-tubulin binding | 4.58E-04 |
| 22 | GO:0017089: glycolipid transporter activity | 4.58E-04 |
| 23 | GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity | 4.58E-04 |
| 24 | GO:0015186: L-glutamine transmembrane transporter activity | 4.58E-04 |
| 25 | GO:0019201: nucleotide kinase activity | 4.58E-04 |
| 26 | GO:0015175: neutral amino acid transmembrane transporter activity | 4.58E-04 |
| 27 | GO:0004445: inositol-polyphosphate 5-phosphatase activity | 4.58E-04 |
| 28 | GO:0005313: L-glutamate transmembrane transporter activity | 6.09E-04 |
| 29 | GO:0017137: Rab GTPase binding | 7.72E-04 |
| 30 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 9.42E-04 |
| 31 | GO:0004556: alpha-amylase activity | 9.42E-04 |
| 32 | GO:2001070: starch binding | 9.42E-04 |
| 33 | GO:0004332: fructose-bisphosphate aldolase activity | 9.42E-04 |
| 34 | GO:0004017: adenylate kinase activity | 1.12E-03 |
| 35 | GO:0004124: cysteine synthase activity | 1.12E-03 |
| 36 | GO:0005261: cation channel activity | 1.12E-03 |
| 37 | GO:0043022: ribosome binding | 1.51E-03 |
| 38 | GO:0004564: beta-fructofuranosidase activity | 1.51E-03 |
| 39 | GO:0004033: aldo-keto reductase (NADP) activity | 1.51E-03 |
| 40 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 1.72E-03 |
| 41 | GO:0004575: sucrose alpha-glucosidase activity | 2.18E-03 |
| 42 | GO:0004805: trehalose-phosphatase activity | 2.41E-03 |
| 43 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 2.66E-03 |
| 44 | GO:0044183: protein binding involved in protein folding | 2.66E-03 |
| 45 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 2.92E-03 |
| 46 | GO:0004407: histone deacetylase activity | 4.31E-03 |
| 47 | GO:0003714: transcription corepressor activity | 4.31E-03 |
| 48 | GO:0033612: receptor serine/threonine kinase binding | 4.92E-03 |
| 49 | GO:0047134: protein-disulfide reductase activity | 6.22E-03 |
| 50 | GO:0004791: thioredoxin-disulfide reductase activity | 7.28E-03 |
| 51 | GO:0008168: methyltransferase activity | 8.23E-03 |
| 52 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 8.77E-03 |
| 53 | GO:0051015: actin filament binding | 8.77E-03 |
| 54 | GO:0016787: hydrolase activity | 9.17E-03 |
| 55 | GO:0015250: water channel activity | 1.04E-02 |
| 56 | GO:0102483: scopolin beta-glucosidase activity | 1.16E-02 |
| 57 | GO:0005096: GTPase activator activity | 1.29E-02 |
| 58 | GO:0004871: signal transducer activity | 1.33E-02 |
| 59 | GO:0050897: cobalt ion binding | 1.38E-02 |
| 60 | GO:0003746: translation elongation factor activity | 1.48E-02 |
| 61 | GO:0008422: beta-glucosidase activity | 1.57E-02 |
| 62 | GO:0043621: protein self-association | 1.87E-02 |
| 63 | GO:0015293: symporter activity | 1.92E-02 |
| 64 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.97E-02 |
| 65 | GO:0004672: protein kinase activity | 2.15E-02 |
| 66 | GO:0016298: lipase activity | 2.24E-02 |
| 67 | GO:0003777: microtubule motor activity | 2.35E-02 |
| 68 | GO:0015171: amino acid transmembrane transporter activity | 2.35E-02 |
| 69 | GO:0031625: ubiquitin protein ligase binding | 2.35E-02 |
| 70 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 2.63E-02 |
| 71 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 2.63E-02 |
| 72 | GO:0003779: actin binding | 2.75E-02 |
| 73 | GO:0015035: protein disulfide oxidoreductase activity | 2.87E-02 |
| 74 | GO:0030170: pyridoxal phosphate binding | 3.55E-02 |
| 75 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.94E-02 |
| 76 | GO:0008194: UDP-glycosyltransferase activity | 4.49E-02 |
| 77 | GO:0005525: GTP binding | 4.57E-02 |
| 78 | GO:0003743: translation initiation factor activity | 4.63E-02 |
| 79 | GO:0042802: identical protein binding | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 3.75E-08 |
| 2 | GO:0009570: chloroplast stroma | 1.12E-04 |
| 3 | GO:0031977: thylakoid lumen | 1.31E-04 |
| 4 | GO:0009534: chloroplast thylakoid | 2.37E-04 |
| 5 | GO:0032432: actin filament bundle | 4.58E-04 |
| 6 | GO:0031359: integral component of chloroplast outer membrane | 1.31E-03 |
| 7 | GO:0005884: actin filament | 2.66E-03 |
| 8 | GO:0009508: plastid chromosome | 3.18E-03 |
| 9 | GO:0005773: vacuole | 3.38E-03 |
| 10 | GO:0030095: chloroplast photosystem II | 3.45E-03 |
| 11 | GO:0009543: chloroplast thylakoid lumen | 4.02E-03 |
| 12 | GO:0009505: plant-type cell wall | 4.07E-03 |
| 13 | GO:0005770: late endosome | 6.92E-03 |
| 14 | GO:0009295: nucleoid | 9.56E-03 |
| 15 | GO:0009535: chloroplast thylakoid membrane | 9.81E-03 |
| 16 | GO:0009707: chloroplast outer membrane | 1.25E-02 |
| 17 | GO:0005886: plasma membrane | 2.41E-02 |
| 18 | GO:0012505: endomembrane system | 2.75E-02 |
| 19 | GO:0010287: plastoglobule | 3.17E-02 |
| 20 | GO:0009579: thylakoid | 3.33E-02 |
| 21 | GO:0005759: mitochondrial matrix | 3.88E-02 |