GO Enrichment Analysis of Co-expressed Genes with
AT3G55605
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 2 | GO:0071433: cell wall repair | 0.00E+00 |
| 3 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 4 | GO:0006605: protein targeting | 1.02E-05 |
| 5 | GO:0019673: GDP-mannose metabolic process | 3.37E-05 |
| 6 | GO:0051775: response to redox state | 3.37E-05 |
| 7 | GO:0080120: CAAX-box protein maturation | 3.37E-05 |
| 8 | GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine | 3.37E-05 |
| 9 | GO:0071586: CAAX-box protein processing | 3.37E-05 |
| 10 | GO:0015865: purine nucleotide transport | 8.48E-05 |
| 11 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 8.48E-05 |
| 12 | GO:0032940: secretion by cell | 1.47E-04 |
| 13 | GO:0042351: 'de novo' GDP-L-fucose biosynthetic process | 1.47E-04 |
| 14 | GO:0033014: tetrapyrrole biosynthetic process | 2.18E-04 |
| 15 | GO:0046902: regulation of mitochondrial membrane permeability | 2.18E-04 |
| 16 | GO:0000460: maturation of 5.8S rRNA | 2.95E-04 |
| 17 | GO:0046283: anthocyanin-containing compound metabolic process | 3.77E-04 |
| 18 | GO:0006564: L-serine biosynthetic process | 3.77E-04 |
| 19 | GO:0010043: response to zinc ion | 4.23E-04 |
| 20 | GO:0000470: maturation of LSU-rRNA | 4.63E-04 |
| 21 | GO:0006102: isocitrate metabolic process | 7.44E-04 |
| 22 | GO:0010204: defense response signaling pathway, resistance gene-independent | 8.45E-04 |
| 23 | GO:0006783: heme biosynthetic process | 9.49E-04 |
| 24 | GO:0098656: anion transmembrane transport | 9.49E-04 |
| 25 | GO:0006415: translational termination | 1.28E-03 |
| 26 | GO:0006890: retrograde vesicle-mediated transport, Golgi to ER | 1.40E-03 |
| 27 | GO:0006820: anion transport | 1.40E-03 |
| 28 | GO:0006094: gluconeogenesis | 1.52E-03 |
| 29 | GO:0040008: regulation of growth | 1.78E-03 |
| 30 | GO:0006487: protein N-linked glycosylation | 2.05E-03 |
| 31 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 2.94E-03 |
| 32 | GO:0042147: retrograde transport, endosome to Golgi | 2.94E-03 |
| 33 | GO:0010501: RNA secondary structure unwinding | 3.09E-03 |
| 34 | GO:0010154: fruit development | 3.25E-03 |
| 35 | GO:0006979: response to oxidative stress | 3.25E-03 |
| 36 | GO:0006891: intra-Golgi vesicle-mediated transport | 3.76E-03 |
| 37 | GO:0006635: fatty acid beta-oxidation | 3.76E-03 |
| 38 | GO:0006886: intracellular protein transport | 4.35E-03 |
| 39 | GO:0015995: chlorophyll biosynthetic process | 5.40E-03 |
| 40 | GO:0046686: response to cadmium ion | 5.64E-03 |
| 41 | GO:0009407: toxin catabolic process | 6.20E-03 |
| 42 | GO:0016051: carbohydrate biosynthetic process | 6.82E-03 |
| 43 | GO:0006099: tricarboxylic acid cycle | 7.04E-03 |
| 44 | GO:0006952: defense response | 7.08E-03 |
| 45 | GO:0042542: response to hydrogen peroxide | 7.91E-03 |
| 46 | GO:0009744: response to sucrose | 8.14E-03 |
| 47 | GO:0009846: pollen germination | 9.54E-03 |
| 48 | GO:0006486: protein glycosylation | 1.00E-02 |
| 49 | GO:0006096: glycolytic process | 1.13E-02 |
| 50 | GO:0048316: seed development | 1.15E-02 |
| 51 | GO:0009626: plant-type hypersensitive response | 1.18E-02 |
| 52 | GO:0018105: peptidyl-serine phosphorylation | 1.31E-02 |
| 53 | GO:0009742: brassinosteroid mediated signaling pathway | 1.34E-02 |
| 54 | GO:0042742: defense response to bacterium | 1.87E-02 |
| 55 | GO:0009451: RNA modification | 1.92E-02 |
| 56 | GO:0009617: response to bacterium | 2.15E-02 |
| 57 | GO:0009826: unidimensional cell growth | 2.51E-02 |
| 58 | GO:0009409: response to cold | 2.53E-02 |
| 59 | GO:0006810: transport | 2.75E-02 |
| 60 | GO:0046777: protein autophosphorylation | 3.16E-02 |
| 61 | GO:0045454: cell redox homeostasis | 3.42E-02 |
| 62 | GO:0032259: methylation | 3.85E-02 |
| 63 | GO:0009751: response to salicylic acid | 3.93E-02 |
| 64 | GO:0009408: response to heat | 3.97E-02 |
| 65 | GO:0048364: root development | 4.10E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050220: prostaglandin-E synthase activity | 0.00E+00 |
| 2 | GO:0003980: UDP-glucose:glycoprotein glucosyltransferase activity | 0.00E+00 |
| 3 | GO:0004164: diphthine synthase activity | 0.00E+00 |
| 4 | GO:0004325: ferrochelatase activity | 3.37E-05 |
| 5 | GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity | 3.37E-05 |
| 6 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 3.37E-05 |
| 7 | GO:0008446: GDP-mannose 4,6-dehydratase activity | 3.37E-05 |
| 8 | GO:0043021: ribonucleoprotein complex binding | 8.48E-05 |
| 9 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 2.18E-04 |
| 10 | GO:0016149: translation release factor activity, codon specific | 2.18E-04 |
| 11 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 2.18E-04 |
| 12 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 3.77E-04 |
| 13 | GO:0005471: ATP:ADP antiporter activity | 3.77E-04 |
| 14 | GO:0015301: anion:anion antiporter activity | 3.77E-04 |
| 15 | GO:0005452: inorganic anion exchanger activity | 3.77E-04 |
| 16 | GO:0005525: GTP binding | 3.88E-04 |
| 17 | GO:0003746: translation elongation factor activity | 4.63E-04 |
| 18 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 4.63E-04 |
| 19 | GO:0004602: glutathione peroxidase activity | 5.53E-04 |
| 20 | GO:0043295: glutathione binding | 6.47E-04 |
| 21 | GO:0051287: NAD binding | 7.10E-04 |
| 22 | GO:0015288: porin activity | 7.44E-04 |
| 23 | GO:0008135: translation factor activity, RNA binding | 8.45E-04 |
| 24 | GO:0008308: voltage-gated anion channel activity | 8.45E-04 |
| 25 | GO:0003747: translation release factor activity | 9.49E-04 |
| 26 | GO:0045309: protein phosphorylated amino acid binding | 1.06E-03 |
| 27 | GO:0019904: protein domain specific binding | 1.28E-03 |
| 28 | GO:0004175: endopeptidase activity | 1.65E-03 |
| 29 | GO:0004190: aspartic-type endopeptidase activity | 1.78E-03 |
| 30 | GO:0005507: copper ion binding | 2.06E-03 |
| 31 | GO:0004298: threonine-type endopeptidase activity | 2.33E-03 |
| 32 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 5.21E-03 |
| 33 | GO:0004004: ATP-dependent RNA helicase activity | 5.40E-03 |
| 34 | GO:0004683: calmodulin-dependent protein kinase activity | 5.40E-03 |
| 35 | GO:0004222: metalloendopeptidase activity | 6.20E-03 |
| 36 | GO:0003697: single-stranded DNA binding | 6.82E-03 |
| 37 | GO:0050661: NADP binding | 7.47E-03 |
| 38 | GO:0004364: glutathione transferase activity | 7.91E-03 |
| 39 | GO:0000166: nucleotide binding | 9.19E-03 |
| 40 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.00E-02 |
| 41 | GO:0015035: protein disulfide oxidoreductase activity | 1.31E-02 |
| 42 | GO:0016746: transferase activity, transferring acyl groups | 1.31E-02 |
| 43 | GO:0008026: ATP-dependent helicase activity | 1.34E-02 |
| 44 | GO:0004386: helicase activity | 1.37E-02 |
| 45 | GO:0016758: transferase activity, transferring hexosyl groups | 1.48E-02 |
| 46 | GO:0008168: methyltransferase activity | 2.51E-02 |
| 47 | GO:0000287: magnesium ion binding | 2.55E-02 |
| 48 | GO:0008233: peptidase activity | 2.97E-02 |
| 49 | GO:0003924: GTPase activity | 3.97E-02 |
| 50 | GO:0009055: electron carrier activity | 4.18E-02 |
| 51 | GO:0004519: endonuclease activity | 4.22E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019034: viral replication complex | 0.00E+00 |
| 2 | GO:0005740: mitochondrial envelope | 2.52E-05 |
| 3 | GO:0070545: PeBoW complex | 8.48E-05 |
| 4 | GO:0005739: mitochondrion | 2.20E-04 |
| 5 | GO:0030660: Golgi-associated vesicle membrane | 2.95E-04 |
| 6 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 2.95E-04 |
| 7 | GO:0008250: oligosaccharyltransferase complex | 3.77E-04 |
| 8 | GO:0005762: mitochondrial large ribosomal subunit | 5.53E-04 |
| 9 | GO:0030687: preribosome, large subunit precursor | 6.47E-04 |
| 10 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 7.44E-04 |
| 11 | GO:0005774: vacuolar membrane | 7.45E-04 |
| 12 | GO:0046930: pore complex | 8.45E-04 |
| 13 | GO:0019773: proteasome core complex, alpha-subunit complex | 8.45E-04 |
| 14 | GO:0005834: heterotrimeric G-protein complex | 9.79E-04 |
| 15 | GO:0005765: lysosomal membrane | 1.28E-03 |
| 16 | GO:0005623: cell | 1.40E-03 |
| 17 | GO:0030176: integral component of endoplasmic reticulum membrane | 1.78E-03 |
| 18 | GO:0043234: protein complex | 1.91E-03 |
| 19 | GO:0005741: mitochondrial outer membrane | 2.33E-03 |
| 20 | GO:0005839: proteasome core complex | 2.33E-03 |
| 21 | GO:0005783: endoplasmic reticulum | 2.52E-03 |
| 22 | GO:0009536: plastid | 4.16E-03 |
| 23 | GO:0005788: endoplasmic reticulum lumen | 5.02E-03 |
| 24 | GO:0005829: cytosol | 5.37E-03 |
| 25 | GO:0009941: chloroplast envelope | 5.51E-03 |
| 26 | GO:0005773: vacuole | 6.62E-03 |
| 27 | GO:0009506: plasmodesma | 7.71E-03 |
| 28 | GO:0000502: proteasome complex | 1.00E-02 |
| 29 | GO:0005654: nucleoplasm | 1.48E-02 |
| 30 | GO:0009507: chloroplast | 1.59E-02 |
| 31 | GO:0005622: intracellular | 1.64E-02 |
| 32 | GO:0005886: plasma membrane | 1.96E-02 |
| 33 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.76E-02 |
| 34 | GO:0005789: endoplasmic reticulum membrane | 2.86E-02 |
| 35 | GO:0031969: chloroplast membrane | 3.01E-02 |
| 36 | GO:0005730: nucleolus | 3.16E-02 |
| 37 | GO:0009570: chloroplast stroma | 3.46E-02 |
| 38 | GO:0005743: mitochondrial inner membrane | 3.77E-02 |