Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G54660

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071482: cellular response to light stimulus1.80E-07
2GO:0019646: aerobic electron transport chain2.32E-06
3GO:0010304: PSII associated light-harvesting complex II catabolic process4.74E-05
4GO:0042372: phylloquinone biosynthetic process5.85E-05
5GO:0009854: oxidative photosynthetic carbon pathway5.85E-05
6GO:0048564: photosystem I assembly8.28E-05
7GO:0005978: glycogen biosynthetic process8.28E-05
8GO:0010206: photosystem II repair1.10E-04
9GO:0010205: photoinhibition1.24E-04
10GO:0009773: photosynthetic electron transport in photosystem I1.54E-04
11GO:0042631: cellular response to water deprivation3.84E-04
12GO:0019252: starch biosynthetic process4.43E-04
13GO:0030163: protein catabolic process5.05E-04
14GO:0055114: oxidation-reduction process5.15E-04
15GO:0009853: photorespiration8.13E-04
16GO:0015979: photosynthesis3.55E-03
17GO:0009735: response to cytokinin5.89E-03
18GO:0007275: multicellular organism development1.66E-02
19GO:0009793: embryo development ending in seed dormancy1.86E-02
20GO:0006508: proteolysis2.28E-02
RankGO TermAdjusted P value
1GO:0008465: glycerate dehydrogenase activity0.00E+00
2GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors0.00E+00
3GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.23E-05
4GO:0008878: glucose-1-phosphate adenylyltransferase activity2.77E-05
5GO:0016491: oxidoreductase activity5.63E-05
6GO:0015386: potassium:proton antiporter activity1.54E-04
7GO:0008266: poly(U) RNA binding2.03E-04
8GO:0003954: NADH dehydrogenase activity2.54E-04
9GO:0015079: potassium ion transmembrane transporter activity2.72E-04
10GO:0004176: ATP-dependent peptidase activity2.90E-04
11GO:0008237: metallopeptidase activity5.46E-04
12GO:0004222: metalloendopeptidase activity7.44E-04
13GO:0003746: translation elongation factor activity8.13E-04
14GO:0051287: NAD binding1.08E-03
15GO:0042802: identical protein binding2.46E-03
16GO:0016887: ATPase activity5.71E-03
17GO:0005525: GTP binding8.87E-03
18GO:0003723: RNA binding4.44E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast0.00E+00
2GO:0031304: intrinsic component of mitochondrial inner membrane6.50E-06
3GO:0009534: chloroplast thylakoid1.61E-05
4GO:0009941: chloroplast envelope1.88E-05
5GO:0009535: chloroplast thylakoid membrane1.23E-04
6GO:0009579: thylakoid4.58E-04
7GO:0009570: chloroplast stroma5.18E-04
8GO:0010287: plastoglobule1.63E-03
9GO:0048046: apoplast2.62E-03
10GO:0031969: chloroplast membrane3.24E-03
11GO:0005743: mitochondrial inner membrane4.02E-03
12GO:0005777: peroxisome6.90E-03
13GO:0005618: cell wall2.74E-02
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Gene type



Gene DE type