Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G53900

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0060416: response to growth hormone0.00E+00
2GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
3GO:0090071: negative regulation of ribosome biogenesis0.00E+00
4GO:0042820: vitamin B6 catabolic process0.00E+00
5GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
6GO:2000121: regulation of removal of superoxide radicals0.00E+00
7GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
8GO:0042821: pyridoxal biosynthetic process0.00E+00
9GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
10GO:0097164: ammonium ion metabolic process0.00E+00
11GO:1905499: trichome papilla formation0.00E+00
12GO:0006399: tRNA metabolic process0.00E+00
13GO:0018160: peptidyl-pyrromethane cofactor linkage0.00E+00
14GO:0018023: peptidyl-lysine trimethylation0.00E+00
15GO:0002184: cytoplasmic translational termination0.00E+00
16GO:0016553: base conversion or substitution editing0.00E+00
17GO:0015995: chlorophyll biosynthetic process2.76E-17
18GO:0006412: translation1.15E-14
19GO:0032544: plastid translation2.66E-14
20GO:0009658: chloroplast organization1.73E-12
21GO:0010027: thylakoid membrane organization2.17E-11
22GO:0015979: photosynthesis2.46E-11
23GO:0009735: response to cytokinin7.23E-11
24GO:0042254: ribosome biogenesis3.57E-10
25GO:0010207: photosystem II assembly3.40E-08
26GO:0006782: protoporphyrinogen IX biosynthetic process2.76E-07
27GO:0090391: granum assembly4.00E-07
28GO:0006633: fatty acid biosynthetic process3.16E-06
29GO:0006783: heme biosynthetic process5.18E-06
30GO:0009773: photosynthetic electron transport in photosystem I1.54E-05
31GO:0018026: peptidyl-lysine monomethylation2.47E-05
32GO:0042255: ribosome assembly7.67E-05
33GO:0006353: DNA-templated transcription, termination7.67E-05
34GO:0006779: porphyrin-containing compound biosynthetic process1.81E-04
35GO:0042335: cuticle development2.16E-04
36GO:0045037: protein import into chloroplast stroma3.38E-04
37GO:0032502: developmental process3.89E-04
38GO:0045454: cell redox homeostasis4.05E-04
39GO:0032543: mitochondrial translation4.11E-04
40GO:0045038: protein import into chloroplast thylakoid membrane4.11E-04
41GO:0031365: N-terminal protein amino acid modification4.11E-04
42GO:0016123: xanthophyll biosynthetic process4.11E-04
43GO:0009828: plant-type cell wall loosening4.77E-04
44GO:0006655: phosphatidylglycerol biosynthetic process5.71E-04
45GO:0010190: cytochrome b6f complex assembly5.71E-04
46GO:0009790: embryo development6.21E-04
47GO:0010019: chloroplast-nucleus signaling pathway7.54E-04
48GO:1901259: chloroplast rRNA processing7.54E-04
49GO:0042372: phylloquinone biosynthetic process7.54E-04
50GO:0043489: RNA stabilization7.66E-04
51GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process7.66E-04
52GO:1904966: positive regulation of vitamin E biosynthetic process7.66E-04
53GO:0006438: valyl-tRNA aminoacylation7.66E-04
54GO:1904964: positive regulation of phytol biosynthetic process7.66E-04
55GO:0046520: sphingoid biosynthetic process7.66E-04
56GO:0042371: vitamin K biosynthetic process7.66E-04
57GO:0043686: co-translational protein modification7.66E-04
58GO:0043007: maintenance of rDNA7.66E-04
59GO:1902458: positive regulation of stomatal opening7.66E-04
60GO:0034337: RNA folding7.66E-04
61GO:0071588: hydrogen peroxide mediated signaling pathway7.66E-04
62GO:0010729: positive regulation of hydrogen peroxide biosynthetic process7.66E-04
63GO:0006434: seryl-tRNA aminoacylation7.66E-04
64GO:0009443: pyridoxal 5'-phosphate salvage7.66E-04
65GO:0010444: guard mother cell differentiation9.62E-04
66GO:0010196: nonphotochemical quenching9.62E-04
67GO:0009772: photosynthetic electron transport in photosystem II9.62E-04
68GO:0009831: plant-type cell wall modification involved in multidimensional cell growth1.17E-03
69GO:0048564: photosystem I assembly1.19E-03
70GO:0000413: protein peptidyl-prolyl isomerization1.59E-03
71GO:0070981: L-asparagine biosynthetic process1.65E-03
72GO:1902326: positive regulation of chlorophyll biosynthetic process1.65E-03
73GO:0080148: negative regulation of response to water deprivation1.65E-03
74GO:0080183: response to photooxidative stress1.65E-03
75GO:0006529: asparagine biosynthetic process1.65E-03
76GO:0008616: queuosine biosynthetic process1.65E-03
77GO:0006729: tetrahydrobiopterin biosynthetic process1.65E-03
78GO:1903426: regulation of reactive oxygen species biosynthetic process1.65E-03
79GO:0006568: tryptophan metabolic process1.65E-03
80GO:0006521: regulation of cellular amino acid metabolic process1.65E-03
81GO:2000123: positive regulation of stomatal complex development1.65E-03
82GO:0043039: tRNA aminoacylation1.65E-03
83GO:0042742: defense response to bacterium2.26E-03
84GO:0006949: syncytium formation2.43E-03
85GO:0006518: peptide metabolic process2.74E-03
86GO:0051604: protein maturation2.74E-03
87GO:0006760: folic acid-containing compound metabolic process2.74E-03
88GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition2.74E-03
89GO:0009664: plant-type cell wall organization2.86E-03
90GO:0016024: CDP-diacylglycerol biosynthetic process3.23E-03
91GO:0010731: protein glutathionylation3.98E-03
92GO:0006424: glutamyl-tRNA aminoacylation3.98E-03
93GO:0046739: transport of virus in multicellular host3.98E-03
94GO:0006241: CTP biosynthetic process3.98E-03
95GO:0050482: arachidonic acid secretion3.98E-03
96GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity3.98E-03
97GO:0006165: nucleoside diphosphate phosphorylation3.98E-03
98GO:0006228: UTP biosynthetic process3.98E-03
99GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis3.98E-03
100GO:2001141: regulation of RNA biosynthetic process3.98E-03
101GO:0071484: cellular response to light intensity3.98E-03
102GO:0051085: chaperone mediated protein folding requiring cofactor3.98E-03
103GO:0009052: pentose-phosphate shunt, non-oxidative branch3.98E-03
104GO:0009647: skotomorphogenesis3.98E-03
105GO:0009627: systemic acquired resistance4.27E-03
106GO:0006546: glycine catabolic process5.38E-03
107GO:0046656: folic acid biosynthetic process5.38E-03
108GO:0006183: GTP biosynthetic process5.38E-03
109GO:0006021: inositol biosynthetic process5.38E-03
110GO:0010037: response to carbon dioxide5.38E-03
111GO:0030007: cellular potassium ion homeostasis5.38E-03
112GO:0006749: glutathione metabolic process5.38E-03
113GO:0015976: carbon utilization5.38E-03
114GO:2000122: negative regulation of stomatal complex development5.38E-03
115GO:0019464: glycine decarboxylation via glycine cleavage system5.38E-03
116GO:0009765: photosynthesis, light harvesting5.38E-03
117GO:2000038: regulation of stomatal complex development5.38E-03
118GO:0019344: cysteine biosynthetic process5.79E-03
119GO:0010375: stomatal complex patterning6.93E-03
120GO:0009247: glycolipid biosynthetic process6.93E-03
121GO:0034052: positive regulation of plant-type hypersensitive response6.93E-03
122GO:0010236: plastoquinone biosynthetic process6.93E-03
123GO:0016120: carotene biosynthetic process6.93E-03
124GO:0006665: sphingolipid metabolic process6.93E-03
125GO:0034599: cellular response to oxidative stress7.49E-03
126GO:0009416: response to light stimulus7.69E-03
127GO:0007005: mitochondrion organization7.72E-03
128GO:0055114: oxidation-reduction process8.46E-03
129GO:0006086: acetyl-CoA biosynthetic process from pyruvate8.61E-03
130GO:0009117: nucleotide metabolic process8.61E-03
131GO:0032973: amino acid export8.61E-03
132GO:0046855: inositol phosphate dephosphorylation8.61E-03
133GO:0042549: photosystem II stabilization8.61E-03
134GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway8.61E-03
135GO:0042793: transcription from plastid promoter8.61E-03
136GO:0009793: embryo development ending in seed dormancy9.92E-03
137GO:0016117: carotenoid biosynthetic process9.97E-03
138GO:0017148: negative regulation of translation1.04E-02
139GO:0048280: vesicle fusion with Golgi apparatus1.04E-02
140GO:0046654: tetrahydrofolate biosynthetic process1.04E-02
141GO:0042026: protein refolding1.04E-02
142GO:0030488: tRNA methylation1.04E-02
143GO:0009854: oxidative photosynthetic carbon pathway1.04E-02
144GO:0010555: response to mannitol1.04E-02
145GO:0009955: adaxial/abaxial pattern specification1.04E-02
146GO:0006614: SRP-dependent cotranslational protein targeting to membrane1.24E-02
147GO:0006400: tRNA modification1.24E-02
148GO:0006826: iron ion transport1.24E-02
149GO:0043090: amino acid import1.24E-02
150GO:0042538: hyperosmotic salinity response1.31E-02
151GO:0006457: protein folding1.34E-02
152GO:0000302: response to reactive oxygen species1.44E-02
153GO:0043068: positive regulation of programmed cell death1.44E-02
154GO:0009690: cytokinin metabolic process1.44E-02
155GO:0006605: protein targeting1.44E-02
156GO:0019375: galactolipid biosynthetic process1.44E-02
157GO:0009704: de-etiolation1.44E-02
158GO:0009819: drought recovery1.44E-02
159GO:0009642: response to light intensity1.44E-02
160GO:2000070: regulation of response to water deprivation1.44E-02
161GO:0006875: cellular metal ion homeostasis1.44E-02
162GO:0006644: phospholipid metabolic process1.44E-02
163GO:0010583: response to cyclopentenone1.54E-02
164GO:0008380: RNA splicing1.65E-02
165GO:0007186: G-protein coupled receptor signaling pathway1.66E-02
166GO:0010497: plasmodesmata-mediated intercellular transport1.66E-02
167GO:0009657: plastid organization1.66E-02
168GO:0017004: cytochrome complex assembly1.66E-02
169GO:0009932: cell tip growth1.66E-02
170GO:0071482: cellular response to light stimulus1.66E-02
171GO:0015996: chlorophyll catabolic process1.66E-02
172GO:0006096: glycolytic process1.78E-02
173GO:0007267: cell-cell signaling1.87E-02
174GO:0034765: regulation of ion transmembrane transport1.89E-02
175GO:0009245: lipid A biosynthetic process1.89E-02
176GO:0048589: developmental growth1.89E-02
177GO:0010206: photosystem II repair1.89E-02
178GO:0080144: amino acid homeostasis1.89E-02
179GO:0042761: very long-chain fatty acid biosynthetic process2.13E-02
180GO:0009826: unidimensional cell growth2.31E-02
181GO:0009870: defense response signaling pathway, resistance gene-dependent2.38E-02
182GO:0006535: cysteine biosynthetic process from serine2.38E-02
183GO:0006896: Golgi to vacuole transport2.38E-02
184GO:0019538: protein metabolic process2.38E-02
185GO:0043069: negative regulation of programmed cell death2.38E-02
186GO:0045036: protein targeting to chloroplast2.38E-02
187GO:0009073: aromatic amino acid family biosynthetic process2.64E-02
188GO:0043085: positive regulation of catalytic activity2.64E-02
189GO:0006352: DNA-templated transcription, initiation2.64E-02
190GO:0018119: peptidyl-cysteine S-nitrosylation2.64E-02
191GO:0006415: translational termination2.64E-02
192GO:0000038: very long-chain fatty acid metabolic process2.64E-02
193GO:0019684: photosynthesis, light reaction2.64E-02
194GO:0009817: defense response to fungus, incompatible interaction2.74E-02
195GO:0018298: protein-chromophore linkage2.74E-02
196GO:0009409: response to cold2.81E-02
197GO:0006790: sulfur compound metabolic process2.90E-02
198GO:0009407: toxin catabolic process3.03E-02
199GO:0009631: cold acclimation3.17E-02
200GO:0010119: regulation of stomatal movement3.17E-02
201GO:0010628: positive regulation of gene expression3.18E-02
202GO:0006006: glucose metabolic process3.18E-02
203GO:0050826: response to freezing3.18E-02
204GO:0009767: photosynthetic electron transport chain3.18E-02
205GO:0080167: response to karrikin3.35E-02
206GO:0006541: glutamine metabolic process3.47E-02
207GO:0010020: chloroplast fission3.47E-02
208GO:0019253: reductive pentose-phosphate cycle3.47E-02
209GO:0009637: response to blue light3.48E-02
210GO:0042744: hydrogen peroxide catabolic process3.51E-02
211GO:0010039: response to iron ion3.76E-02
212GO:0010167: response to nitrate3.76E-02
213GO:0046854: phosphatidylinositol phosphorylation3.76E-02
214GO:0019853: L-ascorbic acid biosynthetic process3.76E-02
215GO:0006839: mitochondrial transport3.96E-02
216GO:0030001: metal ion transport3.96E-02
217GO:0010025: wax biosynthetic process4.06E-02
218GO:0006631: fatty acid metabolic process4.13E-02
219GO:0000027: ribosomal large subunit assembly4.37E-02
220GO:0007010: cytoskeleton organization4.37E-02
221GO:0006487: protein N-linked glycosylation4.37E-02
222GO:0010114: response to red light4.47E-02
223GO:0009640: photomorphogenesis4.47E-02
224GO:0006418: tRNA aminoacylation for protein translation4.69E-02
225GO:0009768: photosynthesis, light harvesting in photosystem I4.69E-02
226GO:0007017: microtubule-based process4.69E-02
227GO:0019953: sexual reproduction4.69E-02
RankGO TermAdjusted P value
1GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity0.00E+00
2GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
3GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
4GO:0050421: nitrite reductase (NO-forming) activity0.00E+00
5GO:0004418: hydroxymethylbilane synthase activity0.00E+00
6GO:0015269: calcium-activated potassium channel activity0.00E+00
7GO:0000979: RNA polymerase II core promoter sequence-specific DNA binding0.00E+00
8GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
9GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
10GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
11GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity0.00E+00
12GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
13GO:0015038: glutathione disulfide oxidoreductase activity0.00E+00
14GO:0045435: lycopene epsilon cyclase activity0.00E+00
15GO:0046408: chlorophyll synthetase activity0.00E+00
16GO:0004853: uroporphyrinogen decarboxylase activity0.00E+00
17GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity0.00E+00
18GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
19GO:0005048: signal sequence binding0.00E+00
20GO:0047889: ferredoxin-nitrate reductase activity0.00E+00
21GO:0009974: zeinoxanthin epsilon hydroxylase activity0.00E+00
22GO:0008887: glycerate kinase activity0.00E+00
23GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
24GO:0048307: ferredoxin-nitrite reductase activity0.00E+00
25GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity0.00E+00
26GO:0019843: rRNA binding3.12E-22
27GO:0003735: structural constituent of ribosome2.77E-16
28GO:0016851: magnesium chelatase activity5.27E-09
29GO:0003755: peptidyl-prolyl cis-trans isomerase activity4.97E-08
30GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity2.47E-05
31GO:0016630: protochlorophyllide reductase activity2.47E-05
32GO:0051920: peroxiredoxin activity3.46E-05
33GO:0005528: FK506 binding6.91E-05
34GO:0016209: antioxidant activity7.67E-05
35GO:0043023: ribosomal large subunit binding1.64E-04
36GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity1.64E-04
37GO:0016279: protein-lysine N-methyltransferase activity2.75E-04
38GO:0004130: cytochrome-c peroxidase activity5.71E-04
39GO:0009374: biotin binding7.66E-04
40GO:0004828: serine-tRNA ligase activity7.66E-04
41GO:0080132: fatty acid alpha-hydroxylase activity7.66E-04
42GO:0004655: porphobilinogen synthase activity7.66E-04
43GO:0015088: copper uptake transmembrane transporter activity7.66E-04
44GO:0004832: valine-tRNA ligase activity7.66E-04
45GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity7.66E-04
46GO:0004071: aspartate-ammonia ligase activity7.66E-04
47GO:0042586: peptide deformylase activity7.66E-04
48GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity7.66E-04
49GO:0010347: L-galactose-1-phosphate phosphatase activity7.66E-04
50GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity7.66E-04
51GO:0000170: sphingosine hydroxylase activity7.66E-04
52GO:0030794: (S)-coclaurine-N-methyltransferase activity7.66E-04
53GO:0004425: indole-3-glycerol-phosphate synthase activity7.66E-04
54GO:0004560: alpha-L-fucosidase activity7.66E-04
55GO:0004033: aldo-keto reductase (NADP) activity1.19E-03
56GO:0003727: single-stranded RNA binding1.30E-03
57GO:0004150: dihydroneopterin aldolase activity1.65E-03
58GO:0042284: sphingolipid delta-4 desaturase activity1.65E-03
59GO:0008934: inositol monophosphate 1-phosphatase activity1.65E-03
60GO:0052833: inositol monophosphate 4-phosphatase activity1.65E-03
61GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity1.65E-03
62GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity1.65E-03
63GO:0102083: 7,8-dihydromonapterin aldolase activity1.65E-03
64GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity1.65E-03
65GO:0052832: inositol monophosphate 3-phosphatase activity1.65E-03
66GO:0008479: queuine tRNA-ribosyltransferase activity1.65E-03
67GO:0004601: peroxidase activity2.08E-03
68GO:0051537: 2 iron, 2 sulfur cluster binding2.27E-03
69GO:0004751: ribose-5-phosphate isomerase activity2.74E-03
70GO:0045174: glutathione dehydrogenase (ascorbate) activity2.74E-03
71GO:0004148: dihydrolipoyl dehydrogenase activity2.74E-03
72GO:0070402: NADPH binding2.74E-03
73GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor2.74E-03
74GO:0005504: fatty acid binding2.74E-03
75GO:0010277: chlorophyllide a oxygenase [overall] activity2.74E-03
76GO:0003690: double-stranded DNA binding3.36E-03
77GO:0016149: translation release factor activity, codon specific3.98E-03
78GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity3.98E-03
79GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity3.98E-03
80GO:0004550: nucleoside diphosphate kinase activity3.98E-03
81GO:0008097: 5S rRNA binding3.98E-03
82GO:0035529: NADH pyrophosphatase activity3.98E-03
83GO:0035250: UDP-galactosyltransferase activity3.98E-03
84GO:0004375: glycine dehydrogenase (decarboxylating) activity3.98E-03
85GO:0008266: poly(U) RNA binding4.16E-03
86GO:0016491: oxidoreductase activity4.80E-03
87GO:0102336: 3-oxo-arachidoyl-CoA synthase activity5.21E-03
88GO:0102337: 3-oxo-cerotoyl-CoA synthase activity5.21E-03
89GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity5.21E-03
90GO:0016987: sigma factor activity5.38E-03
91GO:1990137: plant seed peroxidase activity5.38E-03
92GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity5.38E-03
93GO:0043495: protein anchor5.38E-03
94GO:0004659: prenyltransferase activity5.38E-03
95GO:0001053: plastid sigma factor activity5.38E-03
96GO:0016836: hydro-lyase activity5.38E-03
97GO:0045430: chalcone isomerase activity5.38E-03
98GO:0004045: aminoacyl-tRNA hydrolase activity5.38E-03
99GO:0051536: iron-sulfur cluster binding5.79E-03
100GO:0030414: peptidase inhibitor activity6.93E-03
101GO:0009922: fatty acid elongase activity6.93E-03
102GO:0004623: phospholipase A2 activity6.93E-03
103GO:0004040: amidase activity6.93E-03
104GO:0003989: acetyl-CoA carboxylase activity6.93E-03
105GO:0003959: NADPH dehydrogenase activity6.93E-03
106GO:0031177: phosphopantetheine binding8.61E-03
107GO:0016208: AMP binding8.61E-03
108GO:0016462: pyrophosphatase activity8.61E-03
109GO:0016688: L-ascorbate peroxidase activity8.61E-03
110GO:0015271: outward rectifier potassium channel activity8.61E-03
111GO:0004605: phosphatidate cytidylyltransferase activity8.61E-03
112GO:0080030: methyl indole-3-acetate esterase activity8.61E-03
113GO:0004364: glutathione transferase activity9.31E-03
114GO:0000035: acyl binding1.04E-02
115GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity1.04E-02
116GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity1.04E-02
117GO:0004124: cysteine synthase activity1.04E-02
118GO:0051753: mannan synthase activity1.04E-02
119GO:0005509: calcium ion binding1.18E-02
120GO:0019899: enzyme binding1.24E-02
121GO:0043295: glutathione binding1.24E-02
122GO:0008235: metalloexopeptidase activity1.24E-02
123GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process1.44E-02
124GO:0004034: aldose 1-epimerase activity1.44E-02
125GO:0008312: 7S RNA binding1.44E-02
126GO:0005267: potassium channel activity1.66E-02
127GO:0016722: oxidoreductase activity, oxidizing metal ions1.87E-02
128GO:0005200: structural constituent of cytoskeleton1.87E-02
129GO:0008237: metallopeptidase activity1.87E-02
130GO:0003747: translation release factor activity1.89E-02
131GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors1.89E-02
132GO:0016597: amino acid binding1.98E-02
133GO:0005381: iron ion transmembrane transporter activity2.13E-02
134GO:0016168: chlorophyll binding2.22E-02
135GO:0009055: electron carrier activity2.34E-02
136GO:0015035: protein disulfide oxidoreductase activity2.34E-02
137GO:0008047: enzyme activator activity2.38E-02
138GO:0008794: arsenate reductase (glutaredoxin) activity2.64E-02
139GO:0004177: aminopeptidase activity2.64E-02
140GO:0044183: protein binding involved in protein folding2.64E-02
141GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity2.74E-02
142GO:0004222: metalloendopeptidase activity3.03E-02
143GO:0004089: carbonate dehydratase activity3.18E-02
144GO:0031072: heat shock protein binding3.18E-02
145GO:0003729: mRNA binding3.46E-02
146GO:0051119: sugar transmembrane transporter activity3.76E-02
147GO:0052689: carboxylic ester hydrolase activity3.87E-02
148GO:0051539: 4 iron, 4 sulfur cluster binding3.96E-02
149GO:0031409: pigment binding4.06E-02
150GO:0043424: protein histidine kinase binding4.69E-02
151GO:0005216: ion channel activity4.69E-02
RankGO TermAdjusted P value
1GO:0005835: fatty acid synthase complex0.00E+00
2GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex0.00E+00
3GO:0009515: granal stacked thylakoid0.00E+00
4GO:0009575: chromoplast stroma0.00E+00
5GO:0044391: ribosomal subunit0.00E+00
6GO:0009507: chloroplast4.03E-112
7GO:0009570: chloroplast stroma2.79E-75
8GO:0009941: chloroplast envelope7.69E-60
9GO:0009535: chloroplast thylakoid membrane4.42E-48
10GO:0009579: thylakoid4.52E-39
11GO:0009534: chloroplast thylakoid4.88E-26
12GO:0009543: chloroplast thylakoid lumen2.77E-25
13GO:0005840: ribosome4.60E-19
14GO:0031977: thylakoid lumen4.41E-17
15GO:0009654: photosystem II oxygen evolving complex3.99E-09
16GO:0009536: plastid2.81E-08
17GO:0010007: magnesium chelatase complex4.00E-07
18GO:0000311: plastid large ribosomal subunit6.52E-07
19GO:0019898: extrinsic component of membrane1.79E-06
20GO:0048046: apoplast5.05E-06
21GO:0009706: chloroplast inner membrane5.22E-06
22GO:0030095: chloroplast photosystem II3.56E-05
23GO:0031969: chloroplast membrane5.40E-05
24GO:0042651: thylakoid membrane8.37E-05
25GO:0046658: anchored component of plasma membrane4.03E-04
26GO:0010319: stromule5.24E-04
27GO:0016020: membrane7.36E-04
28GO:0009923: fatty acid elongase complex7.66E-04
29GO:0009344: nitrite reductase complex [NAD(P)H]7.66E-04
30GO:0009547: plastid ribosome7.66E-04
31GO:0015935: small ribosomal subunit9.31E-04
32GO:0009532: plastid stroma9.31E-04
33GO:0031225: anchored component of membrane1.09E-03
34GO:0005618: cell wall1.18E-03
35GO:0015934: large ribosomal subunit1.18E-03
36GO:0080085: signal recognition particle, chloroplast targeting1.65E-03
37GO:0000427: plastid-encoded plastid RNA polymerase complex1.65E-03
38GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)1.75E-03
39GO:0022626: cytosolic ribosome2.44E-03
40GO:0009509: chromoplast2.74E-03
41GO:0009317: acetyl-CoA carboxylase complex2.74E-03
42GO:0009528: plastid inner membrane2.74E-03
43GO:0009295: nucleoid3.19E-03
44GO:0009508: plastid chromosome3.68E-03
45GO:0005960: glycine cleavage complex3.98E-03
46GO:0009505: plant-type cell wall4.20E-03
47GO:0009707: chloroplast outer membrane5.22E-03
48GO:0031897: Tic complex5.38E-03
49GO:0009527: plastid outer membrane5.38E-03
50GO:0009526: plastid envelope5.38E-03
51GO:0055035: plastid thylakoid membrane6.93E-03
52GO:0010287: plastoglobule7.13E-03
53GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)8.61E-03
54GO:0009533: chloroplast stromal thylakoid1.24E-02
55GO:0009538: photosystem I reaction center1.44E-02
56GO:0012507: ER to Golgi transport vesicle membrane1.44E-02
57GO:0009539: photosystem II reaction center1.66E-02
58GO:0005786: signal recognition particle, endoplasmic reticulum targeting1.66E-02
59GO:0005811: lipid particle1.66E-02
60GO:0045298: tubulin complex1.89E-02
61GO:0005763: mitochondrial small ribosomal subunit1.89E-02
62GO:0030529: intracellular ribonucleoprotein complex2.10E-02
63GO:0032040: small-subunit processome2.90E-02
64GO:0000312: plastid small ribosomal subunit3.47E-02
65GO:0030076: light-harvesting complex3.76E-02
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Gene type



Gene DE type