GO Enrichment Analysis of Co-expressed Genes with
AT3G53620
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 2 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 3 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 4 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 5 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
| 6 | GO:0099131: ATP hydrolysis coupled ion transmembrane transport | 0.00E+00 |
| 7 | GO:0008064: regulation of actin polymerization or depolymerization | 0.00E+00 |
| 8 | GO:0051493: regulation of cytoskeleton organization | 0.00E+00 |
| 9 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
| 10 | GO:0016998: cell wall macromolecule catabolic process | 9.43E-05 |
| 11 | GO:0006633: fatty acid biosynthetic process | 1.22E-04 |
| 12 | GO:0043266: regulation of potassium ion transport | 2.43E-04 |
| 13 | GO:0031338: regulation of vesicle fusion | 2.43E-04 |
| 14 | GO:2000021: regulation of ion homeostasis | 2.43E-04 |
| 15 | GO:0043007: maintenance of rDNA | 2.43E-04 |
| 16 | GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway | 2.43E-04 |
| 17 | GO:0060627: regulation of vesicle-mediated transport | 2.43E-04 |
| 18 | GO:0071554: cell wall organization or biogenesis | 2.61E-04 |
| 19 | GO:0010411: xyloglucan metabolic process | 5.26E-04 |
| 20 | GO:0045717: negative regulation of fatty acid biosynthetic process | 5.39E-04 |
| 21 | GO:0010541: acropetal auxin transport | 5.39E-04 |
| 22 | GO:0010198: synergid death | 5.39E-04 |
| 23 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 5.45E-04 |
| 24 | GO:1902448: positive regulation of shade avoidance | 8.75E-04 |
| 25 | GO:0010160: formation of animal organ boundary | 8.75E-04 |
| 26 | GO:0090630: activation of GTPase activity | 8.75E-04 |
| 27 | GO:2001295: malonyl-CoA biosynthetic process | 8.75E-04 |
| 28 | GO:0006833: water transport | 9.63E-04 |
| 29 | GO:0042546: cell wall biogenesis | 1.16E-03 |
| 30 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 1.25E-03 |
| 31 | GO:0055070: copper ion homeostasis | 1.25E-03 |
| 32 | GO:0007231: osmosensory signaling pathway | 1.25E-03 |
| 33 | GO:0051639: actin filament network formation | 1.25E-03 |
| 34 | GO:0008295: spermidine biosynthetic process | 1.67E-03 |
| 35 | GO:0033500: carbohydrate homeostasis | 1.67E-03 |
| 36 | GO:0031122: cytoplasmic microtubule organization | 1.67E-03 |
| 37 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 1.67E-03 |
| 38 | GO:0051764: actin crosslink formation | 1.67E-03 |
| 39 | GO:0034220: ion transmembrane transport | 1.94E-03 |
| 40 | GO:0009958: positive gravitropism | 2.09E-03 |
| 41 | GO:0000304: response to singlet oxygen | 2.13E-03 |
| 42 | GO:0032543: mitochondrial translation | 2.13E-03 |
| 43 | GO:0035434: copper ion transmembrane transport | 2.13E-03 |
| 44 | GO:0016123: xanthophyll biosynthetic process | 2.13E-03 |
| 45 | GO:0006465: signal peptide processing | 2.13E-03 |
| 46 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 2.62E-03 |
| 47 | GO:0006655: phosphatidylglycerol biosynthetic process | 2.62E-03 |
| 48 | GO:0060918: auxin transport | 2.62E-03 |
| 49 | GO:0010190: cytochrome b6f complex assembly | 2.62E-03 |
| 50 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 2.62E-03 |
| 51 | GO:0006014: D-ribose metabolic process | 2.62E-03 |
| 52 | GO:0010405: arabinogalactan protein metabolic process | 2.62E-03 |
| 53 | GO:0006751: glutathione catabolic process | 2.62E-03 |
| 54 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.62E-03 |
| 55 | GO:2000033: regulation of seed dormancy process | 3.15E-03 |
| 56 | GO:0010027: thylakoid membrane organization | 3.71E-03 |
| 57 | GO:0098869: cellular oxidant detoxification | 3.72E-03 |
| 58 | GO:0006955: immune response | 3.72E-03 |
| 59 | GO:0010928: regulation of auxin mediated signaling pathway | 4.31E-03 |
| 60 | GO:0015995: chlorophyll biosynthetic process | 4.37E-03 |
| 61 | GO:0009657: plastid organization | 4.93E-03 |
| 62 | GO:0071482: cellular response to light stimulus | 4.93E-03 |
| 63 | GO:0045490: pectin catabolic process | 5.03E-03 |
| 64 | GO:0006754: ATP biosynthetic process | 5.59E-03 |
| 65 | GO:0006779: porphyrin-containing compound biosynthetic process | 6.27E-03 |
| 66 | GO:0005975: carbohydrate metabolic process | 6.44E-03 |
| 67 | GO:0030001: metal ion transport | 6.98E-03 |
| 68 | GO:0010162: seed dormancy process | 6.99E-03 |
| 69 | GO:0006782: protoporphyrinogen IX biosynthetic process | 6.99E-03 |
| 70 | GO:0019538: protein metabolic process | 6.99E-03 |
| 71 | GO:0006949: syncytium formation | 6.99E-03 |
| 72 | GO:0006816: calcium ion transport | 7.73E-03 |
| 73 | GO:0006415: translational termination | 7.73E-03 |
| 74 | GO:1903507: negative regulation of nucleic acid-templated transcription | 7.73E-03 |
| 75 | GO:0018119: peptidyl-cysteine S-nitrosylation | 7.73E-03 |
| 76 | GO:0046856: phosphatidylinositol dephosphorylation | 7.73E-03 |
| 77 | GO:0009826: unidimensional cell growth | 8.35E-03 |
| 78 | GO:0006820: anion transport | 8.49E-03 |
| 79 | GO:0016024: CDP-diacylglycerol biosynthetic process | 8.49E-03 |
| 80 | GO:0008361: regulation of cell size | 8.49E-03 |
| 81 | GO:0012501: programmed cell death | 8.49E-03 |
| 82 | GO:0009767: photosynthetic electron transport chain | 9.29E-03 |
| 83 | GO:0009664: plant-type cell wall organization | 9.93E-03 |
| 84 | GO:0042538: hyperosmotic salinity response | 9.93E-03 |
| 85 | GO:0010207: photosystem II assembly | 1.01E-02 |
| 86 | GO:0010540: basipetal auxin transport | 1.01E-02 |
| 87 | GO:0070588: calcium ion transmembrane transport | 1.10E-02 |
| 88 | GO:0006468: protein phosphorylation | 1.22E-02 |
| 89 | GO:0006096: glycolytic process | 1.26E-02 |
| 90 | GO:0007010: cytoskeleton organization | 1.27E-02 |
| 91 | GO:0051017: actin filament bundle assembly | 1.27E-02 |
| 92 | GO:0006418: tRNA aminoacylation for protein translation | 1.37E-02 |
| 93 | GO:0007017: microtubule-based process | 1.37E-02 |
| 94 | GO:0031408: oxylipin biosynthetic process | 1.46E-02 |
| 95 | GO:0042545: cell wall modification | 1.48E-02 |
| 96 | GO:0035428: hexose transmembrane transport | 1.56E-02 |
| 97 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.56E-02 |
| 98 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.66E-02 |
| 99 | GO:0048443: stamen development | 1.76E-02 |
| 100 | GO:0009306: protein secretion | 1.76E-02 |
| 101 | GO:0016042: lipid catabolic process | 1.82E-02 |
| 102 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.86E-02 |
| 103 | GO:0016117: carotenoid biosynthetic process | 1.86E-02 |
| 104 | GO:0006629: lipid metabolic process | 1.89E-02 |
| 105 | GO:0000413: protein peptidyl-prolyl isomerization | 1.97E-02 |
| 106 | GO:0008360: regulation of cell shape | 2.07E-02 |
| 107 | GO:0010182: sugar mediated signaling pathway | 2.07E-02 |
| 108 | GO:0048868: pollen tube development | 2.07E-02 |
| 109 | GO:0046323: glucose import | 2.07E-02 |
| 110 | GO:0009741: response to brassinosteroid | 2.07E-02 |
| 111 | GO:0019252: starch biosynthetic process | 2.29E-02 |
| 112 | GO:0007264: small GTPase mediated signal transduction | 2.52E-02 |
| 113 | GO:0030163: protein catabolic process | 2.64E-02 |
| 114 | GO:0009639: response to red or far red light | 2.76E-02 |
| 115 | GO:0009828: plant-type cell wall loosening | 2.76E-02 |
| 116 | GO:0016125: sterol metabolic process | 2.76E-02 |
| 117 | GO:0009739: response to gibberellin | 2.95E-02 |
| 118 | GO:0051607: defense response to virus | 3.01E-02 |
| 119 | GO:0071555: cell wall organization | 3.06E-02 |
| 120 | GO:0016126: sterol biosynthetic process | 3.13E-02 |
| 121 | GO:0009627: systemic acquired resistance | 3.39E-02 |
| 122 | GO:0042128: nitrate assimilation | 3.39E-02 |
| 123 | GO:0030244: cellulose biosynthetic process | 3.78E-02 |
| 124 | GO:0009834: plant-type secondary cell wall biogenesis | 4.05E-02 |
| 125 | GO:0009407: toxin catabolic process | 4.05E-02 |
| 126 | GO:0010218: response to far red light | 4.05E-02 |
| 127 | GO:0048527: lateral root development | 4.19E-02 |
| 128 | GO:0016310: phosphorylation | 4.35E-02 |
| 129 | GO:0016051: carbohydrate biosynthetic process | 4.48E-02 |
| 130 | GO:0009637: response to blue light | 4.48E-02 |
| 131 | GO:0006839: mitochondrial transport | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016631: enoyl-[acyl-carrier-protein] reductase activity | 0.00E+00 |
| 2 | GO:0004496: mevalonate kinase activity | 0.00E+00 |
| 3 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 4 | GO:0004823: leucine-tRNA ligase activity | 0.00E+00 |
| 5 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 6 | GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity | 0.00E+00 |
| 7 | GO:0001872: (1->3)-beta-D-glucan binding | 2.27E-05 |
| 8 | GO:0005528: FK506 binding | 7.01E-05 |
| 9 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.76E-04 |
| 10 | GO:0042834: peptidoglycan binding | 2.43E-04 |
| 11 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 2.43E-04 |
| 12 | GO:0008568: microtubule-severing ATPase activity | 2.43E-04 |
| 13 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 2.43E-04 |
| 14 | GO:0008252: nucleotidase activity | 2.43E-04 |
| 15 | GO:0004560: alpha-L-fucosidase activity | 2.43E-04 |
| 16 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 2.61E-04 |
| 17 | GO:0016788: hydrolase activity, acting on ester bonds | 3.58E-04 |
| 18 | GO:0016413: O-acetyltransferase activity | 3.95E-04 |
| 19 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 5.26E-04 |
| 20 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 5.39E-04 |
| 21 | GO:0004802: transketolase activity | 5.39E-04 |
| 22 | GO:0003839: gamma-glutamylcyclotransferase activity | 5.39E-04 |
| 23 | GO:0004766: spermidine synthase activity | 5.39E-04 |
| 24 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 5.39E-04 |
| 25 | GO:0052689: carboxylic ester hydrolase activity | 6.13E-04 |
| 26 | GO:0004565: beta-galactosidase activity | 6.91E-04 |
| 27 | GO:0016531: copper chaperone activity | 8.75E-04 |
| 28 | GO:0019829: cation-transporting ATPase activity | 8.75E-04 |
| 29 | GO:0002161: aminoacyl-tRNA editing activity | 8.75E-04 |
| 30 | GO:0004075: biotin carboxylase activity | 8.75E-04 |
| 31 | GO:0030267: glyoxylate reductase (NADP) activity | 8.75E-04 |
| 32 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 8.75E-04 |
| 33 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 8.75E-04 |
| 34 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.21E-03 |
| 35 | GO:0004445: inositol-polyphosphate 5-phosphatase activity | 1.25E-03 |
| 36 | GO:0016149: translation release factor activity, codon specific | 1.25E-03 |
| 37 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 1.25E-03 |
| 38 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 1.25E-03 |
| 39 | GO:0052793: pectin acetylesterase activity | 1.67E-03 |
| 40 | GO:0008526: phosphatidylinositol transporter activity | 1.67E-03 |
| 41 | GO:0016836: hydro-lyase activity | 1.67E-03 |
| 42 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 1.67E-03 |
| 43 | GO:0017137: Rab GTPase binding | 2.13E-03 |
| 44 | GO:0003989: acetyl-CoA carboxylase activity | 2.13E-03 |
| 45 | GO:0008381: mechanically-gated ion channel activity | 2.13E-03 |
| 46 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.62E-03 |
| 47 | GO:0042578: phosphoric ester hydrolase activity | 2.62E-03 |
| 48 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 2.62E-03 |
| 49 | GO:0008200: ion channel inhibitor activity | 2.62E-03 |
| 50 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 2.62E-03 |
| 51 | GO:0004747: ribokinase activity | 3.15E-03 |
| 52 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 3.15E-03 |
| 53 | GO:0051920: peroxiredoxin activity | 3.15E-03 |
| 54 | GO:0015250: water channel activity | 3.71E-03 |
| 55 | GO:0043295: glutathione binding | 3.72E-03 |
| 56 | GO:0008865: fructokinase activity | 4.31E-03 |
| 57 | GO:0016209: antioxidant activity | 4.31E-03 |
| 58 | GO:0030247: polysaccharide binding | 4.37E-03 |
| 59 | GO:0005375: copper ion transmembrane transporter activity | 4.93E-03 |
| 60 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 5.59E-03 |
| 61 | GO:0003747: translation release factor activity | 5.59E-03 |
| 62 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 5.59E-03 |
| 63 | GO:0047617: acyl-CoA hydrolase activity | 6.27E-03 |
| 64 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 7.73E-03 |
| 65 | GO:0047372: acylglycerol lipase activity | 7.73E-03 |
| 66 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 8.49E-03 |
| 67 | GO:0016301: kinase activity | 8.87E-03 |
| 68 | GO:0010329: auxin efflux transmembrane transporter activity | 9.29E-03 |
| 69 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 9.29E-03 |
| 70 | GO:0005262: calcium channel activity | 9.29E-03 |
| 71 | GO:0004674: protein serine/threonine kinase activity | 1.02E-02 |
| 72 | GO:0004190: aspartic-type endopeptidase activity | 1.10E-02 |
| 73 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.18E-02 |
| 74 | GO:0045330: aspartyl esterase activity | 1.18E-02 |
| 75 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.18E-02 |
| 76 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.18E-02 |
| 77 | GO:0003714: transcription corepressor activity | 1.27E-02 |
| 78 | GO:0008324: cation transmembrane transporter activity | 1.37E-02 |
| 79 | GO:0030599: pectinesterase activity | 1.43E-02 |
| 80 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 1.46E-02 |
| 81 | GO:0030570: pectate lyase activity | 1.66E-02 |
| 82 | GO:0004812: aminoacyl-tRNA ligase activity | 1.86E-02 |
| 83 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.96E-02 |
| 84 | GO:0005355: glucose transmembrane transporter activity | 2.18E-02 |
| 85 | GO:0019901: protein kinase binding | 2.29E-02 |
| 86 | GO:0051015: actin filament binding | 2.64E-02 |
| 87 | GO:0005200: structural constituent of cytoskeleton | 2.88E-02 |
| 88 | GO:0005524: ATP binding | 3.46E-02 |
| 89 | GO:0004721: phosphoprotein phosphatase activity | 3.52E-02 |
| 90 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.78E-02 |
| 91 | GO:0005096: GTPase activator activity | 3.92E-02 |
| 92 | GO:0004222: metalloendopeptidase activity | 4.05E-02 |
| 93 | GO:0004601: peroxidase activity | 4.07E-02 |
| 94 | GO:0030145: manganese ion binding | 4.19E-02 |
| 95 | GO:0003993: acid phosphatase activity | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005835: fatty acid synthase complex | 0.00E+00 |
| 2 | GO:0070971: endoplasmic reticulum exit site | 0.00E+00 |
| 3 | GO:0005886: plasma membrane | 1.55E-08 |
| 4 | GO:0009505: plant-type cell wall | 3.37E-07 |
| 5 | GO:0009570: chloroplast stroma | 4.97E-07 |
| 6 | GO:0009941: chloroplast envelope | 9.43E-06 |
| 7 | GO:0009507: chloroplast | 3.00E-05 |
| 8 | GO:0031225: anchored component of membrane | 1.03E-04 |
| 9 | GO:0048046: apoplast | 2.08E-04 |
| 10 | GO:0046658: anchored component of plasma membrane | 2.57E-04 |
| 11 | GO:0005618: cell wall | 2.77E-04 |
| 12 | GO:0009543: chloroplast thylakoid lumen | 5.66E-04 |
| 13 | GO:0031977: thylakoid lumen | 9.99E-04 |
| 14 | GO:0009534: chloroplast thylakoid | 1.02E-03 |
| 15 | GO:0032432: actin filament bundle | 1.25E-03 |
| 16 | GO:0015630: microtubule cytoskeleton | 1.25E-03 |
| 17 | GO:0031969: chloroplast membrane | 2.47E-03 |
| 18 | GO:0009579: thylakoid | 3.81E-03 |
| 19 | GO:0005576: extracellular region | 4.70E-03 |
| 20 | GO:0009535: chloroplast thylakoid membrane | 4.74E-03 |
| 21 | GO:0005884: actin filament | 7.73E-03 |
| 22 | GO:0030659: cytoplasmic vesicle membrane | 1.01E-02 |
| 23 | GO:0016021: integral component of membrane | 1.15E-02 |
| 24 | GO:0043234: protein complex | 1.18E-02 |
| 25 | GO:0009536: plastid | 1.36E-02 |
| 26 | GO:0009506: plasmodesma | 2.11E-02 |
| 27 | GO:0019898: extrinsic component of membrane | 2.29E-02 |
| 28 | GO:0005887: integral component of plasma membrane | 2.77E-02 |
| 29 | GO:0000151: ubiquitin ligase complex | 3.78E-02 |
| 30 | GO:0005874: microtubule | 4.86E-02 |