Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G53100

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009644: response to high light intensity2.67E-06
2GO:0009773: photosynthetic electron transport in photosystem I4.91E-06
3GO:0000481: maturation of 5S rRNA1.04E-05
4GO:0034337: RNA folding1.04E-05
5GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly7.70E-05
6GO:0071484: cellular response to light intensity7.70E-05
7GO:0010023: proanthocyanidin biosynthetic process1.07E-04
8GO:0045727: positive regulation of translation1.07E-04
9GO:0015994: chlorophyll metabolic process1.07E-04
10GO:0010117: photoprotection1.40E-04
11GO:0045038: protein import into chloroplast thylakoid membrane1.40E-04
12GO:0006596: polyamine biosynthetic process1.74E-04
13GO:0048759: xylem vessel member cell differentiation1.74E-04
14GO:0010256: endomembrane system organization1.74E-04
15GO:0009772: photosynthetic electron transport in photosystem II2.50E-04
16GO:0032508: DNA duplex unwinding2.90E-04
17GO:0032544: plastid translation3.32E-04
18GO:0009932: cell tip growth3.32E-04
19GO:0090305: nucleic acid phosphodiester bond hydrolysis3.74E-04
20GO:0009638: phototropism4.18E-04
21GO:0009718: anthocyanin-containing compound biosynthetic process6.04E-04
22GO:0010053: root epidermal cell differentiation7.02E-04
23GO:0010017: red or far-red light signaling pathway9.65E-04
24GO:0010087: phloem or xylem histogenesis1.19E-03
25GO:0009958: positive gravitropism1.25E-03
26GO:0010193: response to ozone1.44E-03
27GO:0010218: response to far red light2.33E-03
28GO:0010114: response to red light3.04E-03
29GO:0009926: auxin polar transport3.04E-03
30GO:0006364: rRNA processing3.72E-03
31GO:0009585: red, far-red light phototransduction3.72E-03
32GO:0010224: response to UV-B3.81E-03
33GO:0009739: response to gibberellin7.45E-03
34GO:0009826: unidimensional cell growth9.10E-03
35GO:0009737: response to abscisic acid9.27E-03
36GO:0009723: response to ethylene1.03E-02
37GO:0015979: photosynthesis1.19E-02
38GO:0009751: response to salicylic acid1.42E-02
39GO:0009753: response to jasmonic acid1.50E-02
40GO:0009735: response to cytokinin2.02E-02
41GO:0009416: response to light stimulus2.15E-02
42GO:0009611: response to wounding2.18E-02
43GO:0045893: positive regulation of transcription, DNA-templated2.37E-02
44GO:0009414: response to water deprivation3.50E-02
45GO:0042742: defense response to bacterium3.56E-02
46GO:0009409: response to cold4.42E-02
47GO:0006810: transport4.68E-02
48GO:0005975: carbohydrate metabolic process4.79E-02
49GO:0046686: response to cadmium ion4.88E-02
RankGO TermAdjusted P value
1GO:0010487: thermospermine synthase activity0.00E+00
2GO:0016768: spermine synthase activity1.04E-05
3GO:0047746: chlorophyllase activity2.78E-05
4GO:0016868: intramolecular transferase activity, phosphotransferases2.78E-05
5GO:0005094: Rho GDP-dissociation inhibitor activity2.78E-05
6GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.07E-04
7GO:0008266: poly(U) RNA binding6.53E-04
8GO:0004176: ATP-dependent peptidase activity9.11E-04
9GO:0050662: coenzyme binding1.31E-03
10GO:0048038: quinone binding1.44E-03
11GO:0004518: nuclease activity1.50E-03
12GO:0005096: GTPase activator activity2.26E-03
13GO:0019843: rRNA binding5.52E-03
14GO:0003729: mRNA binding6.47E-03
15GO:0005515: protein binding6.85E-03
16GO:0042802: identical protein binding8.14E-03
17GO:0008233: peptidase activity1.07E-02
18GO:0004871: signal transducer activity1.27E-02
19GO:0009055: electron carrier activity1.50E-02
20GO:0003824: catalytic activity3.80E-02
RankGO TermAdjusted P value
1GO:0009534: chloroplast thylakoid9.44E-09
2GO:0009535: chloroplast thylakoid membrane5.79E-07
3GO:0009507: chloroplast8.05E-06
4GO:0080085: signal recognition particle, chloroplast targeting2.78E-05
5GO:0009941: chloroplast envelope7.13E-05
6GO:0009538: photosystem I reaction center2.90E-04
7GO:0005786: signal recognition particle, endoplasmic reticulum targeting3.32E-04
8GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)3.74E-04
9GO:0032040: small-subunit processome5.55E-04
10GO:0030095: chloroplast photosystem II6.53E-04
11GO:0042651: thylakoid membrane8.59E-04
12GO:0009570: chloroplast stroma9.49E-04
13GO:0009579: thylakoid2.60E-03
14GO:0010287: plastoglobule5.32E-03
15GO:0009543: chloroplast thylakoid lumen5.52E-03
16GO:0005623: cell5.62E-03
17GO:0009705: plant-type vacuole membrane6.89E-03
18GO:0005622: intracellular3.24E-02
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Gene type



Gene DE type