GO Enrichment Analysis of Co-expressed Genes with
AT3G52940
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905499: trichome papilla formation | 0.00E+00 |
| 2 | GO:0033231: carbohydrate export | 0.00E+00 |
| 3 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 4 | GO:0097164: ammonium ion metabolic process | 0.00E+00 |
| 5 | GO:0043007: maintenance of rDNA | 5.94E-05 |
| 6 | GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway | 5.94E-05 |
| 7 | GO:1902334: fructose export from vacuole to cytoplasm | 5.94E-05 |
| 8 | GO:0015755: fructose transport | 5.94E-05 |
| 9 | GO:0009750: response to fructose | 7.05E-05 |
| 10 | GO:0010115: regulation of abscisic acid biosynthetic process | 1.44E-04 |
| 11 | GO:0070981: L-asparagine biosynthetic process | 1.44E-04 |
| 12 | GO:0045717: negative regulation of fatty acid biosynthetic process | 1.44E-04 |
| 13 | GO:0006529: asparagine biosynthetic process | 1.44E-04 |
| 14 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 2.46E-04 |
| 15 | GO:0000271: polysaccharide biosynthetic process | 3.00E-04 |
| 16 | GO:0042335: cuticle development | 3.00E-04 |
| 17 | GO:0071555: cell wall organization | 3.05E-04 |
| 18 | GO:0009646: response to absence of light | 3.49E-04 |
| 19 | GO:0010731: protein glutathionylation | 3.57E-04 |
| 20 | GO:0046739: transport of virus in multicellular host | 3.57E-04 |
| 21 | GO:0006808: regulation of nitrogen utilization | 4.78E-04 |
| 22 | GO:0000919: cell plate assembly | 4.78E-04 |
| 23 | GO:0045038: protein import into chloroplast thylakoid membrane | 6.05E-04 |
| 24 | GO:0006665: sphingolipid metabolic process | 6.05E-04 |
| 25 | GO:0006655: phosphatidylglycerol biosynthetic process | 7.40E-04 |
| 26 | GO:0006561: proline biosynthetic process | 7.40E-04 |
| 27 | GO:0048280: vesicle fusion with Golgi apparatus | 8.82E-04 |
| 28 | GO:0010444: guard mother cell differentiation | 1.03E-03 |
| 29 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 1.03E-03 |
| 30 | GO:0071669: plant-type cell wall organization or biogenesis | 1.03E-03 |
| 31 | GO:0006875: cellular metal ion homeostasis | 1.18E-03 |
| 32 | GO:0042546: cell wall biogenesis | 1.22E-03 |
| 33 | GO:0010497: plasmodesmata-mediated intercellular transport | 1.35E-03 |
| 34 | GO:0042538: hyperosmotic salinity response | 1.47E-03 |
| 35 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.69E-03 |
| 36 | GO:0006535: cysteine biosynthetic process from serine | 1.88E-03 |
| 37 | GO:0009688: abscisic acid biosynthetic process | 1.88E-03 |
| 38 | GO:0006896: Golgi to vacuole transport | 1.88E-03 |
| 39 | GO:0006995: cellular response to nitrogen starvation | 1.88E-03 |
| 40 | GO:0019538: protein metabolic process | 1.88E-03 |
| 41 | GO:0000038: very long-chain fatty acid metabolic process | 2.07E-03 |
| 42 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.27E-03 |
| 43 | GO:0045037: protein import into chloroplast stroma | 2.27E-03 |
| 44 | GO:0006541: glutamine metabolic process | 2.68E-03 |
| 45 | GO:0009735: response to cytokinin | 2.98E-03 |
| 46 | GO:0010025: wax biosynthetic process | 3.11E-03 |
| 47 | GO:0019344: cysteine biosynthetic process | 3.34E-03 |
| 48 | GO:0006633: fatty acid biosynthetic process | 3.46E-03 |
| 49 | GO:0016998: cell wall macromolecule catabolic process | 3.81E-03 |
| 50 | GO:0051260: protein homooligomerization | 3.81E-03 |
| 51 | GO:0010091: trichome branching | 4.55E-03 |
| 52 | GO:0042127: regulation of cell proliferation | 4.55E-03 |
| 53 | GO:0019722: calcium-mediated signaling | 4.55E-03 |
| 54 | GO:0070417: cellular response to cold | 4.81E-03 |
| 55 | GO:0042147: retrograde transport, endosome to Golgi | 4.81E-03 |
| 56 | GO:0010182: sugar mediated signaling pathway | 5.34E-03 |
| 57 | GO:0045489: pectin biosynthetic process | 5.34E-03 |
| 58 | GO:0008654: phospholipid biosynthetic process | 5.89E-03 |
| 59 | GO:0006623: protein targeting to vacuole | 5.89E-03 |
| 60 | GO:0006891: intra-Golgi vesicle-mediated transport | 6.17E-03 |
| 61 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 6.17E-03 |
| 62 | GO:0009860: pollen tube growth | 6.31E-03 |
| 63 | GO:0010583: response to cyclopentenone | 6.46E-03 |
| 64 | GO:0009567: double fertilization forming a zygote and endosperm | 7.05E-03 |
| 65 | GO:0007267: cell-cell signaling | 7.35E-03 |
| 66 | GO:0051607: defense response to virus | 7.65E-03 |
| 67 | GO:0000910: cytokinesis | 7.65E-03 |
| 68 | GO:0009414: response to water deprivation | 7.91E-03 |
| 69 | GO:0006888: ER to Golgi vesicle-mediated transport | 8.92E-03 |
| 70 | GO:0010411: xyloglucan metabolic process | 8.92E-03 |
| 71 | GO:0016311: dephosphorylation | 9.25E-03 |
| 72 | GO:0006869: lipid transport | 9.54E-03 |
| 73 | GO:0030244: cellulose biosynthetic process | 9.59E-03 |
| 74 | GO:0009832: plant-type cell wall biogenesis | 9.93E-03 |
| 75 | GO:0000160: phosphorelay signal transduction system | 9.93E-03 |
| 76 | GO:0009813: flavonoid biosynthetic process | 9.93E-03 |
| 77 | GO:0009407: toxin catabolic process | 1.03E-02 |
| 78 | GO:0016051: carbohydrate biosynthetic process | 1.13E-02 |
| 79 | GO:0006631: fatty acid metabolic process | 1.28E-02 |
| 80 | GO:0051707: response to other organism | 1.35E-02 |
| 81 | GO:0009636: response to toxic substance | 1.47E-02 |
| 82 | GO:0006855: drug transmembrane transport | 1.51E-02 |
| 83 | GO:0009736: cytokinin-activated signaling pathway | 1.67E-02 |
| 84 | GO:0006096: glycolytic process | 1.88E-02 |
| 85 | GO:0043086: negative regulation of catalytic activity | 1.88E-02 |
| 86 | GO:0048367: shoot system development | 1.93E-02 |
| 87 | GO:0048316: seed development | 1.93E-02 |
| 88 | GO:0042545: cell wall modification | 2.10E-02 |
| 89 | GO:0051726: regulation of cell cycle | 2.24E-02 |
| 90 | GO:0009793: embryo development ending in seed dormancy | 2.36E-02 |
| 91 | GO:0007623: circadian rhythm | 3.17E-02 |
| 92 | GO:0045490: pectin catabolic process | 3.17E-02 |
| 93 | GO:0007166: cell surface receptor signaling pathway | 3.49E-02 |
| 94 | GO:0009658: chloroplast organization | 4.33E-02 |
| 95 | GO:0006970: response to osmotic stress | 4.56E-02 |
| 96 | GO:0007049: cell cycle | 4.68E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015284: fructose uniporter activity | 0.00E+00 |
| 2 | GO:0005048: signal sequence binding | 0.00E+00 |
| 3 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 4 | GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity | 0.00E+00 |
| 5 | GO:0051753: mannan synthase activity | 1.38E-05 |
| 6 | GO:0015088: copper uptake transmembrane transporter activity | 5.94E-05 |
| 7 | GO:0004328: formamidase activity | 5.94E-05 |
| 8 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 5.94E-05 |
| 9 | GO:0004071: aspartate-ammonia ligase activity | 5.94E-05 |
| 10 | GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity | 1.44E-04 |
| 11 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 1.44E-04 |
| 12 | GO:0005353: fructose transmembrane transporter activity | 1.44E-04 |
| 13 | GO:0004857: enzyme inhibitor activity | 1.58E-04 |
| 14 | GO:0005504: fatty acid binding | 2.46E-04 |
| 15 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 2.46E-04 |
| 16 | GO:0017150: tRNA dihydrouridine synthase activity | 2.46E-04 |
| 17 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.46E-04 |
| 18 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 3.57E-04 |
| 19 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 3.57E-04 |
| 20 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 3.57E-04 |
| 21 | GO:0045430: chalcone isomerase activity | 4.78E-04 |
| 22 | GO:0046527: glucosyltransferase activity | 4.78E-04 |
| 23 | GO:0016836: hydro-lyase activity | 4.78E-04 |
| 24 | GO:0009922: fatty acid elongase activity | 6.05E-04 |
| 25 | GO:0004605: phosphatidate cytidylyltransferase activity | 7.40E-04 |
| 26 | GO:0080030: methyl indole-3-acetate esterase activity | 7.40E-04 |
| 27 | GO:0004124: cysteine synthase activity | 8.82E-04 |
| 28 | GO:0043295: glutathione binding | 1.03E-03 |
| 29 | GO:0004364: glutathione transferase activity | 1.13E-03 |
| 30 | GO:0008312: 7S RNA binding | 1.18E-03 |
| 31 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 1.52E-03 |
| 32 | GO:0005381: iron ion transmembrane transporter activity | 1.69E-03 |
| 33 | GO:0004022: alcohol dehydrogenase (NAD) activity | 2.47E-03 |
| 34 | GO:0051119: sugar transmembrane transporter activity | 2.89E-03 |
| 35 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 3.11E-03 |
| 36 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 3.11E-03 |
| 37 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 3.11E-03 |
| 38 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 4.05E-03 |
| 39 | GO:0016760: cellulose synthase (UDP-forming) activity | 4.30E-03 |
| 40 | GO:0003713: transcription coactivator activity | 5.34E-03 |
| 41 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 6.17E-03 |
| 42 | GO:0000156: phosphorelay response regulator activity | 6.75E-03 |
| 43 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 8.92E-03 |
| 44 | GO:0042803: protein homodimerization activity | 9.11E-03 |
| 45 | GO:0015238: drug transmembrane transporter activity | 9.93E-03 |
| 46 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.03E-02 |
| 47 | GO:0003993: acid phosphatase activity | 1.17E-02 |
| 48 | GO:0000149: SNARE binding | 1.20E-02 |
| 49 | GO:0005484: SNAP receptor activity | 1.35E-02 |
| 50 | GO:0008289: lipid binding | 1.50E-02 |
| 51 | GO:0045330: aspartyl esterase activity | 1.80E-02 |
| 52 | GO:0016874: ligase activity | 2.06E-02 |
| 53 | GO:0030599: pectinesterase activity | 2.06E-02 |
| 54 | GO:0016758: transferase activity, transferring hexosyl groups | 2.47E-02 |
| 55 | GO:0030170: pyridoxal phosphate binding | 2.72E-02 |
| 56 | GO:0015144: carbohydrate transmembrane transporter activity | 2.86E-02 |
| 57 | GO:0008565: protein transporter activity | 2.86E-02 |
| 58 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.02E-02 |
| 59 | GO:0046910: pectinesterase inhibitor activity | 3.02E-02 |
| 60 | GO:0015297: antiporter activity | 3.07E-02 |
| 61 | GO:0005351: sugar:proton symporter activity | 3.12E-02 |
| 62 | GO:0016788: hydrolase activity, acting on ester bonds | 4.38E-02 |
| 63 | GO:0050660: flavin adenine dinucleotide binding | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046658: anchored component of plasma membrane | 1.04E-07 |
| 2 | GO:0031225: anchored component of membrane | 2.07E-05 |
| 3 | GO:0009923: fatty acid elongase complex | 5.94E-05 |
| 4 | GO:0009941: chloroplast envelope | 6.08E-05 |
| 5 | GO:0080085: signal recognition particle, chloroplast targeting | 1.44E-04 |
| 6 | GO:0009570: chloroplast stroma | 1.62E-04 |
| 7 | GO:0009509: chromoplast | 2.46E-04 |
| 8 | GO:0031897: Tic complex | 4.78E-04 |
| 9 | GO:0012507: ER to Golgi transport vesicle membrane | 1.18E-03 |
| 10 | GO:0016021: integral component of membrane | 1.34E-03 |
| 11 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.35E-03 |
| 12 | GO:0005794: Golgi apparatus | 1.98E-03 |
| 13 | GO:0000139: Golgi membrane | 2.56E-03 |
| 14 | GO:0005886: plasma membrane | 2.67E-03 |
| 15 | GO:0009506: plasmodesma | 3.06E-03 |
| 16 | GO:0009504: cell plate | 5.89E-03 |
| 17 | GO:0000151: ubiquitin ligase complex | 9.59E-03 |
| 18 | GO:0009505: plant-type cell wall | 1.09E-02 |
| 19 | GO:0048046: apoplast | 1.15E-02 |
| 20 | GO:0009507: chloroplast | 1.16E-02 |
| 21 | GO:0031902: late endosome membrane | 1.28E-02 |
| 22 | GO:0031201: SNARE complex | 1.28E-02 |
| 23 | GO:0005618: cell wall | 1.30E-02 |
| 24 | GO:0005576: extracellular region | 1.39E-02 |
| 25 | GO:0005789: endoplasmic reticulum membrane | 1.40E-02 |
| 26 | GO:0005773: vacuole | 2.02E-02 |
| 27 | GO:0009706: chloroplast inner membrane | 2.15E-02 |
| 28 | GO:0005623: cell | 2.57E-02 |
| 29 | GO:0005802: trans-Golgi network | 3.06E-02 |
| 30 | GO:0009705: plant-type vacuole membrane | 3.17E-02 |
| 31 | GO:0005622: intracellular | 3.39E-02 |
| 32 | GO:0005768: endosome | 3.48E-02 |
| 33 | GO:0009536: plastid | 4.72E-02 |