GO Enrichment Analysis of Co-expressed Genes with
AT3G52900
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008064: regulation of actin polymerization or depolymerization | 0.00E+00 |
| 2 | GO:0051493: regulation of cytoskeleton organization | 0.00E+00 |
| 3 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 4 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 5 | GO:0015995: chlorophyll biosynthetic process | 5.60E-06 |
| 6 | GO:0043266: regulation of potassium ion transport | 1.18E-04 |
| 7 | GO:0010480: microsporocyte differentiation | 1.18E-04 |
| 8 | GO:0031338: regulation of vesicle fusion | 1.18E-04 |
| 9 | GO:2000021: regulation of ion homeostasis | 1.18E-04 |
| 10 | GO:0010115: regulation of abscisic acid biosynthetic process | 2.73E-04 |
| 11 | GO:0045717: negative regulation of fatty acid biosynthetic process | 2.73E-04 |
| 12 | GO:0043617: cellular response to sucrose starvation | 4.52E-04 |
| 13 | GO:0090630: activation of GTPase activity | 4.52E-04 |
| 14 | GO:2001295: malonyl-CoA biosynthetic process | 4.52E-04 |
| 15 | GO:0034059: response to anoxia | 6.47E-04 |
| 16 | GO:0071554: cell wall organization or biogenesis | 9.58E-04 |
| 17 | GO:0007264: small GTPase mediated signal transduction | 1.02E-03 |
| 18 | GO:0000304: response to singlet oxygen | 1.08E-03 |
| 19 | GO:0030163: protein catabolic process | 1.08E-03 |
| 20 | GO:0006633: fatty acid biosynthetic process | 1.23E-03 |
| 21 | GO:0006796: phosphate-containing compound metabolic process | 1.33E-03 |
| 22 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.33E-03 |
| 23 | GO:0006751: glutathione catabolic process | 1.33E-03 |
| 24 | GO:0042549: photosystem II stabilization | 1.33E-03 |
| 25 | GO:0006694: steroid biosynthetic process | 1.59E-03 |
| 26 | GO:0051510: regulation of unidimensional cell growth | 1.87E-03 |
| 27 | GO:0098869: cellular oxidant detoxification | 1.87E-03 |
| 28 | GO:0048437: floral organ development | 1.87E-03 |
| 29 | GO:0010928: regulation of auxin mediated signaling pathway | 2.16E-03 |
| 30 | GO:0006526: arginine biosynthetic process | 2.46E-03 |
| 31 | GO:0009808: lignin metabolic process | 2.46E-03 |
| 32 | GO:0009657: plastid organization | 2.46E-03 |
| 33 | GO:0010206: photosystem II repair | 2.78E-03 |
| 34 | GO:0006779: porphyrin-containing compound biosynthetic process | 3.12E-03 |
| 35 | GO:1900865: chloroplast RNA modification | 3.12E-03 |
| 36 | GO:0046777: protein autophosphorylation | 3.42E-03 |
| 37 | GO:0006782: protoporphyrinogen IX biosynthetic process | 3.46E-03 |
| 38 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.82E-03 |
| 39 | GO:0048229: gametophyte development | 3.82E-03 |
| 40 | GO:0006415: translational termination | 3.82E-03 |
| 41 | GO:0012501: programmed cell death | 4.19E-03 |
| 42 | GO:0009718: anthocyanin-containing compound biosynthetic process | 4.57E-03 |
| 43 | GO:0010075: regulation of meristem growth | 4.57E-03 |
| 44 | GO:0009934: regulation of meristem structural organization | 4.97E-03 |
| 45 | GO:0048768: root hair cell tip growth | 4.97E-03 |
| 46 | GO:0010143: cutin biosynthetic process | 4.97E-03 |
| 47 | GO:0007010: cytoskeleton organization | 6.22E-03 |
| 48 | GO:0006418: tRNA aminoacylation for protein translation | 6.66E-03 |
| 49 | GO:0007017: microtubule-based process | 6.66E-03 |
| 50 | GO:0031408: oxylipin biosynthetic process | 7.11E-03 |
| 51 | GO:0009306: protein secretion | 8.53E-03 |
| 52 | GO:0048653: anther development | 9.53E-03 |
| 53 | GO:0008360: regulation of cell shape | 1.00E-02 |
| 54 | GO:0009958: positive gravitropism | 1.00E-02 |
| 55 | GO:0006520: cellular amino acid metabolic process | 1.00E-02 |
| 56 | GO:0048868: pollen tube development | 1.00E-02 |
| 57 | GO:0009741: response to brassinosteroid | 1.00E-02 |
| 58 | GO:0007018: microtubule-based movement | 1.06E-02 |
| 59 | GO:0009646: response to absence of light | 1.06E-02 |
| 60 | GO:0009416: response to light stimulus | 1.07E-02 |
| 61 | GO:0009791: post-embryonic development | 1.11E-02 |
| 62 | GO:0006508: proteolysis | 1.12E-02 |
| 63 | GO:0016132: brassinosteroid biosynthetic process | 1.16E-02 |
| 64 | GO:0080156: mitochondrial mRNA modification | 1.16E-02 |
| 65 | GO:0010583: response to cyclopentenone | 1.22E-02 |
| 66 | GO:0016032: viral process | 1.22E-02 |
| 67 | GO:0005975: carbohydrate metabolic process | 1.23E-02 |
| 68 | GO:0009826: unidimensional cell growth | 1.41E-02 |
| 69 | GO:0010027: thylakoid membrane organization | 1.51E-02 |
| 70 | GO:0009723: response to ethylene | 1.69E-02 |
| 71 | GO:0016311: dephosphorylation | 1.76E-02 |
| 72 | GO:0048481: plant ovule development | 1.82E-02 |
| 73 | GO:0009817: defense response to fungus, incompatible interaction | 1.82E-02 |
| 74 | GO:0009834: plant-type secondary cell wall biogenesis | 1.96E-02 |
| 75 | GO:0007165: signal transduction | 1.98E-02 |
| 76 | GO:0030001: metal ion transport | 2.37E-02 |
| 77 | GO:0009744: response to sucrose | 2.59E-02 |
| 78 | GO:0006855: drug transmembrane transport | 2.88E-02 |
| 79 | GO:0009753: response to jasmonic acid | 2.88E-02 |
| 80 | GO:0008152: metabolic process | 2.96E-02 |
| 81 | GO:0042538: hyperosmotic salinity response | 3.04E-02 |
| 82 | GO:0006364: rRNA processing | 3.20E-02 |
| 83 | GO:0006813: potassium ion transport | 3.20E-02 |
| 84 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.28E-02 |
| 85 | GO:0006857: oligopeptide transport | 3.36E-02 |
| 86 | GO:0006096: glycolytic process | 3.60E-02 |
| 87 | GO:0009620: response to fungus | 3.85E-02 |
| 88 | GO:0042545: cell wall modification | 4.02E-02 |
| 89 | GO:0006396: RNA processing | 4.19E-02 |
| 90 | GO:0009742: brassinosteroid mediated signaling pathway | 4.28E-02 |
| 91 | GO:0046686: response to cadmium ion | 4.49E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 2 | GO:0050614: delta24-sterol reductase activity | 0.00E+00 |
| 3 | GO:0047513: 1,2-alpha-L-fucosidase activity | 0.00E+00 |
| 4 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 5 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 1.18E-04 |
| 6 | GO:0003867: 4-aminobutyrate transaminase activity | 1.18E-04 |
| 7 | GO:0004565: beta-galactosidase activity | 2.53E-04 |
| 8 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 2.73E-04 |
| 9 | GO:0004802: transketolase activity | 2.73E-04 |
| 10 | GO:0003839: gamma-glutamylcyclotransferase activity | 2.73E-04 |
| 11 | GO:0015929: hexosaminidase activity | 2.73E-04 |
| 12 | GO:0004563: beta-N-acetylhexosaminidase activity | 2.73E-04 |
| 13 | GO:0005528: FK506 binding | 4.00E-04 |
| 14 | GO:0004075: biotin carboxylase activity | 4.52E-04 |
| 15 | GO:0030267: glyoxylate reductase (NADP) activity | 4.52E-04 |
| 16 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 4.52E-04 |
| 17 | GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity | 4.52E-04 |
| 18 | GO:0002161: aminoacyl-tRNA editing activity | 4.52E-04 |
| 19 | GO:0016149: translation release factor activity, codon specific | 6.47E-04 |
| 20 | GO:0001872: (1->3)-beta-D-glucan binding | 6.47E-04 |
| 21 | GO:0016851: magnesium chelatase activity | 6.47E-04 |
| 22 | GO:0016836: hydro-lyase activity | 8.60E-04 |
| 23 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 8.60E-04 |
| 24 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 8.60E-04 |
| 25 | GO:0003989: acetyl-CoA carboxylase activity | 1.08E-03 |
| 26 | GO:0017137: Rab GTPase binding | 1.08E-03 |
| 27 | GO:0016413: O-acetyltransferase activity | 1.29E-03 |
| 28 | GO:0008200: ion channel inhibitor activity | 1.33E-03 |
| 29 | GO:0042578: phosphoric ester hydrolase activity | 1.33E-03 |
| 30 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.59E-03 |
| 31 | GO:0051920: peroxiredoxin activity | 1.59E-03 |
| 32 | GO:0015631: tubulin binding | 1.59E-03 |
| 33 | GO:0005096: GTPase activator activity | 1.85E-03 |
| 34 | GO:0004427: inorganic diphosphatase activity | 1.87E-03 |
| 35 | GO:0043022: ribosome binding | 2.16E-03 |
| 36 | GO:0016209: antioxidant activity | 2.16E-03 |
| 37 | GO:0003747: translation release factor activity | 2.78E-03 |
| 38 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.33E-03 |
| 39 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 3.82E-03 |
| 40 | GO:0000049: tRNA binding | 4.19E-03 |
| 41 | GO:0004190: aspartic-type endopeptidase activity | 5.37E-03 |
| 42 | GO:0008324: cation transmembrane transporter activity | 6.66E-03 |
| 43 | GO:0004176: ATP-dependent peptidase activity | 7.11E-03 |
| 44 | GO:0033612: receptor serine/threonine kinase binding | 7.11E-03 |
| 45 | GO:0004707: MAP kinase activity | 7.11E-03 |
| 46 | GO:0004252: serine-type endopeptidase activity | 7.58E-03 |
| 47 | GO:0004812: aminoacyl-tRNA ligase activity | 9.02E-03 |
| 48 | GO:0008017: microtubule binding | 9.87E-03 |
| 49 | GO:0005200: structural constituent of cytoskeleton | 1.39E-02 |
| 50 | GO:0008237: metallopeptidase activity | 1.39E-02 |
| 51 | GO:0016597: amino acid binding | 1.45E-02 |
| 52 | GO:0004601: peroxidase activity | 1.46E-02 |
| 53 | GO:0030247: polysaccharide binding | 1.70E-02 |
| 54 | GO:0008236: serine-type peptidase activity | 1.76E-02 |
| 55 | GO:0005516: calmodulin binding | 1.79E-02 |
| 56 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.82E-02 |
| 57 | GO:0015238: drug transmembrane transporter activity | 1.89E-02 |
| 58 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 2.02E-02 |
| 59 | GO:0016787: hydrolase activity | 2.06E-02 |
| 60 | GO:0003993: acid phosphatase activity | 2.23E-02 |
| 61 | GO:0004185: serine-type carboxypeptidase activity | 2.59E-02 |
| 62 | GO:0003924: GTPase activity | 2.68E-02 |
| 63 | GO:0035091: phosphatidylinositol binding | 2.73E-02 |
| 64 | GO:0051287: NAD binding | 2.96E-02 |
| 65 | GO:0003777: microtubule motor activity | 3.44E-02 |
| 66 | GO:0045330: aspartyl esterase activity | 3.44E-02 |
| 67 | GO:0016301: kinase activity | 3.66E-02 |
| 68 | GO:0030599: pectinesterase activity | 3.94E-02 |
| 69 | GO:0003779: actin binding | 4.02E-02 |
| 70 | GO:0016887: ATPase activity | 4.14E-02 |
| 71 | GO:0005524: ATP binding | 4.18E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070971: endoplasmic reticulum exit site | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 5.83E-08 |
| 3 | GO:0009570: chloroplast stroma | 3.71E-05 |
| 4 | GO:0009505: plant-type cell wall | 1.19E-04 |
| 5 | GO:0009941: chloroplast envelope | 2.21E-04 |
| 6 | GO:0010007: magnesium chelatase complex | 4.52E-04 |
| 7 | GO:0009534: chloroplast thylakoid | 6.40E-04 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 9.26E-04 |
| 9 | GO:0005886: plasma membrane | 1.57E-03 |
| 10 | GO:0009533: chloroplast stromal thylakoid | 1.87E-03 |
| 11 | GO:0031977: thylakoid lumen | 2.64E-03 |
| 12 | GO:0045298: tubulin complex | 2.78E-03 |
| 13 | GO:0009579: thylakoid | 2.94E-03 |
| 14 | GO:0005874: microtubule | 3.00E-03 |
| 15 | GO:0043234: protein complex | 5.79E-03 |
| 16 | GO:0009535: chloroplast thylakoid membrane | 6.45E-03 |
| 17 | GO:0005871: kinesin complex | 9.02E-03 |
| 18 | GO:0019898: extrinsic component of membrane | 1.11E-02 |
| 19 | GO:0046658: anchored component of plasma membrane | 1.25E-02 |
| 20 | GO:0012505: endomembrane system | 4.02E-02 |
| 21 | GO:0010287: plastoglobule | 4.64E-02 |
| 22 | GO:0016020: membrane | 4.90E-02 |