Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G51800

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006412: translation6.59E-127
2GO:0042254: ribosome biogenesis3.16E-56
3GO:0000027: ribosomal large subunit assembly2.92E-13
4GO:0009735: response to cytokinin1.25E-06
5GO:0042274: ribosomal small subunit biogenesis1.67E-05
6GO:0009955: adaxial/abaxial pattern specification5.74E-05
7GO:0000028: ribosomal small subunit assembly9.94E-05
8GO:0006407: rRNA export from nucleus1.44E-04
9GO:0018920: glyphosate metabolic process1.44E-04
10GO:0030490: maturation of SSU-rRNA1.44E-04
11GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.44E-04
12GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.44E-04
13GO:0048569: post-embryonic animal organ development3.29E-04
14GO:0009967: positive regulation of signal transduction3.29E-04
15GO:0006626: protein targeting to mitochondrion3.34E-04
16GO:0009965: leaf morphogenesis5.06E-04
17GO:1902626: assembly of large subunit precursor of preribosome5.40E-04
18GO:0002181: cytoplasmic translation5.40E-04
19GO:0010476: gibberellin mediated signaling pathway5.40E-04
20GO:0042256: mature ribosome assembly5.40E-04
21GO:0006364: rRNA processing6.36E-04
22GO:0040007: growth7.50E-04
23GO:0070301: cellular response to hydrogen peroxide7.73E-04
24GO:0006241: CTP biosynthetic process7.73E-04
25GO:0006165: nucleoside diphosphate phosphorylation7.73E-04
26GO:0006228: UTP biosynthetic process7.73E-04
27GO:0009793: embryo development ending in seed dormancy9.75E-04
28GO:0006183: GTP biosynthetic process1.02E-03
29GO:0071493: cellular response to UV-B1.29E-03
30GO:0000470: maturation of LSU-rRNA1.59E-03
31GO:0000911: cytokinesis by cell plate formation1.91E-03
32GO:0009423: chorismate biosynthetic process1.91E-03
33GO:0000373: Group II intron splicing3.35E-03
34GO:0008283: cell proliferation3.75E-03
35GO:0000387: spliceosomal snRNP assembly3.76E-03
36GO:0010162: seed dormancy process4.18E-03
37GO:0009409: response to cold4.35E-03
38GO:0009073: aromatic amino acid family biosynthetic process4.61E-03
39GO:0010015: root morphogenesis4.61E-03
40GO:0006913: nucleocytoplasmic transport4.61E-03
41GO:0006820: anion transport5.06E-03
42GO:0010229: inflorescence development5.52E-03
43GO:0010102: lateral root morphogenesis5.52E-03
44GO:0046686: response to cadmium ion5.56E-03
45GO:0048467: gynoecium development6.00E-03
46GO:0006414: translational elongation6.26E-03
47GO:0009944: polarity specification of adaxial/abaxial axis7.52E-03
48GO:0030150: protein import into mitochondrial matrix7.52E-03
49GO:0007005: mitochondrion organization9.17E-03
50GO:0009294: DNA mediated transformation9.75E-03
51GO:0071215: cellular response to abscisic acid stimulus9.75E-03
52GO:0000413: protein peptidyl-prolyl isomerization1.16E-02
53GO:0009749: response to glucose1.35E-02
54GO:0009791: post-embryonic development1.35E-02
55GO:0032502: developmental process1.48E-02
56GO:0010090: trichome morphogenesis1.55E-02
57GO:0006811: ion transport2.38E-02
58GO:0010043: response to zinc ion2.46E-02
59GO:0009644: response to high light intensity3.33E-02
60GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.60E-02
61GO:0006417: regulation of translation4.18E-02
62GO:0009620: response to fungus4.68E-02
RankGO TermAdjusted P value
1GO:0016018: cyclosporin A binding0.00E+00
2GO:0003735: structural constituent of ribosome2.53E-153
3GO:0003729: mRNA binding2.24E-42
4GO:0019843: rRNA binding6.55E-07
5GO:0008097: 5S rRNA binding8.93E-06
6GO:0003866: 3-phosphoshikimate 1-carboxyvinyltransferase activity1.44E-04
7GO:0005078: MAP-kinase scaffold activity3.29E-04
8GO:0032947: protein complex scaffold5.40E-04
9GO:0070181: small ribosomal subunit rRNA binding5.40E-04
10GO:0004550: nucleoside diphosphate kinase activity7.73E-04
11GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity2.31E-03
12GO:0015288: porin activity2.60E-03
13GO:0008308: voltage-gated anion channel activity2.96E-03
14GO:0015266: protein channel activity5.52E-03
15GO:0004407: histone deacetylase activity7.52E-03
16GO:0003723: RNA binding1.35E-02
17GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.51E-02
RankGO TermAdjusted P value
1GO:0043186: P granule0.00E+00
2GO:0022626: cytosolic ribosome1.98E-108
3GO:0005840: ribosome4.30E-99
4GO:0022625: cytosolic large ribosomal subunit1.55E-98
5GO:0022627: cytosolic small ribosomal subunit1.96E-55
6GO:0005730: nucleolus4.69E-43
7GO:0005737: cytoplasm2.00E-37
8GO:0005829: cytosol1.22E-32
9GO:0009506: plasmodesma1.38E-27
10GO:0015934: large ribosomal subunit7.75E-20
11GO:0005774: vacuolar membrane5.63E-16
12GO:0016020: membrane1.59E-13
13GO:0005618: cell wall3.47E-13
14GO:0015935: small ribosomal subunit6.66E-13
15GO:0005773: vacuole4.09E-10
16GO:0005886: plasma membrane5.23E-09
17GO:0009507: chloroplast2.46E-06
18GO:0005742: mitochondrial outer membrane translocase complex1.25E-04
19GO:0030686: 90S preribosome1.44E-04
20GO:0034719: SMN-Sm protein complex5.40E-04
21GO:0005682: U5 snRNP1.02E-03
22GO:0005687: U4 snRNP1.29E-03
23GO:0097526: spliceosomal tri-snRNP complex1.29E-03
24GO:0005689: U12-type spliceosomal complex1.91E-03
25GO:0071004: U2-type prespliceosome2.60E-03
26GO:0046930: pore complex2.96E-03
27GO:0005685: U1 snRNP3.35E-03
28GO:0071011: precatalytic spliceosome3.76E-03
29GO:0005686: U2 snRNP4.18E-03
30GO:0071013: catalytic step 2 spliceosome4.61E-03
31GO:0019013: viral nucleocapsid5.52E-03
32GO:0005758: mitochondrial intermembrane space7.52E-03
33GO:0005622: intracellular8.17E-03
34GO:0005741: mitochondrial outer membrane8.61E-03
35GO:0030529: intracellular ribonucleoprotein complex1.84E-02
36GO:0005743: mitochondrial inner membrane3.28E-02
37GO:0005681: spliceosomal complex4.38E-02
38GO:0005834: heterotrimeric G-protein complex4.58E-02
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Gene type



Gene DE type