Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G51430

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006592: ornithine biosynthetic process0.00E+00
2GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway0.00E+00
3GO:0032780: negative regulation of ATPase activity0.00E+00
4GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response0.00E+00
5GO:0046292: formaldehyde metabolic process0.00E+00
6GO:0002376: immune system process0.00E+00
7GO:0030149: sphingolipid catabolic process0.00E+00
8GO:0006983: ER overload response0.00E+00
9GO:0006069: ethanol oxidation0.00E+00
10GO:0048227: plasma membrane to endosome transport0.00E+00
11GO:0010499: proteasomal ubiquitin-independent protein catabolic process0.00E+00
12GO:0010398: xylogalacturonan metabolic process0.00E+00
13GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
14GO:0043069: negative regulation of programmed cell death2.21E-05
15GO:0001676: long-chain fatty acid metabolic process2.76E-05
16GO:0006090: pyruvate metabolic process7.90E-05
17GO:0055114: oxidation-reduction process1.38E-04
18GO:0045454: cell redox homeostasis1.90E-04
19GO:0010150: leaf senescence2.04E-04
20GO:0006662: glycerol ether metabolic process2.43E-04
21GO:0006605: protein targeting2.62E-04
22GO:0006772: thiamine metabolic process2.72E-04
23GO:0035266: meristem growth2.72E-04
24GO:0007292: female gamete generation2.72E-04
25GO:0006805: xenobiotic metabolic process2.72E-04
26GO:0080173: male-female gamete recognition during double fertilization2.72E-04
27GO:0080136: priming of cellular response to stress2.72E-04
28GO:0060862: negative regulation of floral organ abscission2.72E-04
29GO:0030968: endoplasmic reticulum unfolded protein response3.23E-04
30GO:1905182: positive regulation of urease activity5.99E-04
31GO:0019521: D-gluconate metabolic process5.99E-04
32GO:0006101: citrate metabolic process5.99E-04
33GO:0043066: negative regulation of apoptotic process5.99E-04
34GO:0019483: beta-alanine biosynthetic process5.99E-04
35GO:0006212: uracil catabolic process5.99E-04
36GO:0019752: carboxylic acid metabolic process5.99E-04
37GO:0009812: flavonoid metabolic process5.99E-04
38GO:1902000: homogentisate catabolic process5.99E-04
39GO:0051788: response to misfolded protein5.99E-04
40GO:0007154: cell communication5.99E-04
41GO:0031349: positive regulation of defense response5.99E-04
42GO:0019441: tryptophan catabolic process to kynurenine5.99E-04
43GO:0010507: negative regulation of autophagy5.99E-04
44GO:0008219: cell death7.33E-04
45GO:0006499: N-terminal protein myristoylation8.29E-04
46GO:0016075: rRNA catabolic process9.72E-04
47GO:0009072: aromatic amino acid family metabolic process9.72E-04
48GO:0060968: regulation of gene silencing9.72E-04
49GO:1900140: regulation of seedling development9.72E-04
50GO:0010359: regulation of anion channel activity9.72E-04
51GO:0061158: 3'-UTR-mediated mRNA destabilization9.72E-04
52GO:0051176: positive regulation of sulfur metabolic process9.72E-04
53GO:0090351: seedling development1.01E-03
54GO:0034599: cellular response to oxidative stress1.04E-03
55GO:0000162: tryptophan biosynthetic process1.12E-03
56GO:0034976: response to endoplasmic reticulum stress1.12E-03
57GO:0006979: response to oxidative stress1.19E-03
58GO:0006624: vacuolar protein processing1.39E-03
59GO:0048194: Golgi vesicle budding1.39E-03
60GO:0007231: osmosensory signaling pathway1.39E-03
61GO:2001289: lipid X metabolic process1.39E-03
62GO:0072334: UDP-galactose transmembrane transport1.39E-03
63GO:0009399: nitrogen fixation1.39E-03
64GO:0006986: response to unfolded protein1.39E-03
65GO:0070534: protein K63-linked ubiquitination1.86E-03
66GO:0060548: negative regulation of cell death1.86E-03
67GO:0048830: adventitious root development1.86E-03
68GO:0033500: carbohydrate homeostasis1.86E-03
69GO:1902584: positive regulation of response to water deprivation1.86E-03
70GO:2000038: regulation of stomatal complex development1.86E-03
71GO:0010363: regulation of plant-type hypersensitive response1.86E-03
72GO:0010188: response to microbial phytotoxin1.86E-03
73GO:0006878: cellular copper ion homeostasis1.86E-03
74GO:0006542: glutamine biosynthetic process1.86E-03
75GO:0051603: proteolysis involved in cellular protein catabolic process2.06E-03
76GO:0030308: negative regulation of cell growth2.37E-03
77GO:0045927: positive regulation of growth2.37E-03
78GO:0006564: L-serine biosynthetic process2.37E-03
79GO:0006097: glyoxylate cycle2.37E-03
80GO:0009229: thiamine diphosphate biosynthetic process2.37E-03
81GO:0048544: recognition of pollen2.63E-03
82GO:0006301: postreplication repair2.93E-03
83GO:0006751: glutathione catabolic process2.93E-03
84GO:0048827: phyllome development2.93E-03
85GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation2.93E-03
86GO:0048232: male gamete generation2.93E-03
87GO:0043248: proteasome assembly2.93E-03
88GO:1902456: regulation of stomatal opening2.93E-03
89GO:1900425: negative regulation of defense response to bacterium2.93E-03
90GO:0009267: cellular response to starvation2.93E-03
91GO:0035435: phosphate ion transmembrane transport2.93E-03
92GO:0006014: D-ribose metabolic process2.93E-03
93GO:0009759: indole glucosinolate biosynthetic process2.93E-03
94GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly2.93E-03
95GO:0010942: positive regulation of cell death2.93E-03
96GO:0000302: response to reactive oxygen species3.02E-03
97GO:0010193: response to ozone3.02E-03
98GO:0007264: small GTPase mediated signal transduction3.22E-03
99GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.33E-03
100GO:0006468: protein phosphorylation3.37E-03
101GO:2000037: regulation of stomatal complex patterning3.52E-03
102GO:0006694: steroid biosynthetic process3.52E-03
103GO:0098655: cation transmembrane transport3.52E-03
104GO:0034389: lipid particle organization3.52E-03
105GO:0009611: response to wounding3.85E-03
106GO:0043090: amino acid import4.15E-03
107GO:0080186: developmental vegetative growth4.15E-03
108GO:0006614: SRP-dependent cotranslational protein targeting to membrane4.15E-03
109GO:0050790: regulation of catalytic activity4.15E-03
110GO:0006102: isocitrate metabolic process4.82E-03
111GO:0009819: drought recovery4.82E-03
112GO:0010078: maintenance of root meristem identity4.82E-03
113GO:1900150: regulation of defense response to fungus4.82E-03
114GO:0009808: lignin metabolic process5.52E-03
115GO:0010120: camalexin biosynthetic process5.52E-03
116GO:0006526: arginine biosynthetic process5.52E-03
117GO:0043562: cellular response to nitrogen levels5.52E-03
118GO:0009408: response to heat5.73E-03
119GO:0009651: response to salt stress6.11E-03
120GO:0009051: pentose-phosphate shunt, oxidative branch6.25E-03
121GO:0006098: pentose-phosphate shunt6.25E-03
122GO:0007568: aging6.57E-03
123GO:0071577: zinc II ion transmembrane transport7.03E-03
124GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway7.03E-03
125GO:0006470: protein dephosphorylation7.33E-03
126GO:0009641: shade avoidance7.82E-03
127GO:0009299: mRNA transcription7.82E-03
128GO:0000103: sulfate assimilation7.82E-03
129GO:0048829: root cap development7.82E-03
130GO:0006631: fatty acid metabolic process8.57E-03
131GO:0009684: indoleacetic acid biosynthetic process8.66E-03
132GO:0010015: root morphogenesis8.66E-03
133GO:0000038: very long-chain fatty acid metabolic process8.66E-03
134GO:0072593: reactive oxygen species metabolic process8.66E-03
135GO:0009698: phenylpropanoid metabolic process8.66E-03
136GO:0043085: positive regulation of catalytic activity8.66E-03
137GO:0009682: induced systemic resistance8.66E-03
138GO:0052544: defense response by callose deposition in cell wall8.66E-03
139GO:0046686: response to cadmium ion9.32E-03
140GO:0006108: malate metabolic process1.04E-02
141GO:0006807: nitrogen compound metabolic process1.04E-02
142GO:0010229: inflorescence development1.04E-02
143GO:0009636: response to toxic substance1.05E-02
144GO:0009933: meristem structural organization1.13E-02
145GO:0006812: cation transport1.17E-02
146GO:0010053: root epidermal cell differentiation1.23E-02
147GO:0010039: response to iron ion1.23E-02
148GO:0009901: anther dehiscence1.23E-02
149GO:0042742: defense response to bacterium1.27E-02
150GO:0006508: proteolysis1.32E-02
151GO:0006071: glycerol metabolic process1.33E-02
152GO:0010200: response to chitin1.48E-02
153GO:0009695: jasmonic acid biosynthetic process1.53E-02
154GO:0009626: plant-type hypersensitive response1.59E-02
155GO:0051260: protein homooligomerization1.64E-02
156GO:0016226: iron-sulfur cluster assembly1.75E-02
157GO:0030433: ubiquitin-dependent ERAD pathway1.75E-02
158GO:0006886: intracellular protein transport1.85E-02
159GO:0006012: galactose metabolic process1.86E-02
160GO:0009625: response to insect1.86E-02
161GO:0015031: protein transport1.91E-02
162GO:0010091: trichome branching1.97E-02
163GO:0042147: retrograde transport, endosome to Golgi2.09E-02
164GO:0042631: cellular response to water deprivation2.21E-02
165GO:0006885: regulation of pH2.33E-02
166GO:0006520: cellular amino acid metabolic process2.33E-02
167GO:0045489: pectin biosynthetic process2.33E-02
168GO:0009646: response to absence of light2.45E-02
169GO:0006623: protein targeting to vacuole2.58E-02
170GO:0010183: pollen tube guidance2.58E-02
171GO:0019252: starch biosynthetic process2.58E-02
172GO:0006635: fatty acid beta-oxidation2.71E-02
173GO:0010583: response to cyclopentenone2.84E-02
174GO:0040008: regulation of growth2.96E-02
175GO:0006914: autophagy3.10E-02
176GO:0050832: defense response to fungus3.17E-02
177GO:0010286: heat acclimation3.24E-02
178GO:0051607: defense response to virus3.38E-02
179GO:0007166: cell surface receptor signaling pathway3.55E-02
180GO:0009607: response to biotic stimulus3.66E-02
181GO:0009617: response to bacterium3.70E-02
182GO:0042128: nitrate assimilation3.80E-02
183GO:0048481: plant ovule development4.25E-02
184GO:0010311: lateral root formation4.40E-02
185GO:0006952: defense response4.43E-02
186GO:0009738: abscisic acid-activated signaling pathway4.53E-02
187GO:0009407: toxin catabolic process4.55E-02
188GO:0010043: response to zinc ion4.71E-02
189GO:0010119: regulation of stomatal movement4.71E-02
190GO:0009555: pollen development4.72E-02
191GO:0006865: amino acid transport4.86E-02
RankGO TermAdjusted P value
1GO:0016034: maleylacetoacetate isomerase activity0.00E+00
2GO:0080007: S-nitrosoglutathione reductase activity0.00E+00
3GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
4GO:0050242: pyruvate, phosphate dikinase activity0.00E+00
5GO:0070577: lysine-acetylated histone binding0.00E+00
6GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity0.00E+00
7GO:0004157: dihydropyrimidinase activity0.00E+00
8GO:0008777: acetylornithine deacetylase activity0.00E+00
9GO:0042030: ATPase inhibitor activity0.00E+00
10GO:0016504: peptidase activator activity0.00E+00
11GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity0.00E+00
12GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism4.38E-05
13GO:0005524: ATP binding6.85E-05
14GO:0102391: decanoate--CoA ligase activity1.58E-04
15GO:0004012: phospholipid-translocating ATPase activity1.58E-04
16GO:0047134: protein-disulfide reductase activity1.96E-04
17GO:0004467: long-chain fatty acid-CoA ligase activity2.07E-04
18GO:0004714: transmembrane receptor protein tyrosine kinase activity2.62E-04
19GO:0004791: thioredoxin-disulfide reductase activity2.68E-04
20GO:0004425: indole-3-glycerol-phosphate synthase activity2.72E-04
21GO:0004112: cyclic-nucleotide phosphodiesterase activity2.72E-04
22GO:0004788: thiamine diphosphokinase activity2.72E-04
23GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity2.72E-04
24GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity2.72E-04
25GO:0019786: Atg8-specific protease activity2.72E-04
26GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.84E-04
27GO:0015035: protein disulfide oxidoreductase activity5.37E-04
28GO:0004713: protein tyrosine kinase activity5.39E-04
29GO:0004617: phosphoglycerate dehydrogenase activity5.99E-04
30GO:0003994: aconitate hydratase activity5.99E-04
31GO:0004061: arylformamidase activity5.99E-04
32GO:0019172: glyoxalase III activity5.99E-04
33GO:0019779: Atg8 activating enzyme activity5.99E-04
34GO:0047209: coniferyl-alcohol glucosyltransferase activity5.99E-04
35GO:0004566: beta-glucuronidase activity5.99E-04
36GO:0004022: alcohol dehydrogenase (NAD) activity8.06E-04
37GO:0005093: Rab GDP-dissociation inhibitor activity9.72E-04
38GO:0016151: nickel cation binding9.72E-04
39GO:0008430: selenium binding9.72E-04
40GO:0005047: signal recognition particle binding9.72E-04
41GO:0016174: NAD(P)H oxidase activity9.72E-04
42GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity9.72E-04
43GO:0003840: gamma-glutamyltransferase activity9.72E-04
44GO:0036374: glutathione hydrolase activity9.72E-04
45GO:0033897: ribonuclease T2 activity9.72E-04
46GO:0016805: dipeptidase activity9.72E-04
47GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity9.72E-04
48GO:0004300: enoyl-CoA hydratase activity1.39E-03
49GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity1.39E-03
50GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity1.86E-03
51GO:0070628: proteasome binding1.86E-03
52GO:0004470: malic enzyme activity1.86E-03
53GO:0019776: Atg8 ligase activity1.86E-03
54GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor1.86E-03
55GO:0016298: lipase activity2.06E-03
56GO:0005459: UDP-galactose transmembrane transporter activity2.37E-03
57GO:0008948: oxaloacetate decarboxylase activity2.37E-03
58GO:0005496: steroid binding2.37E-03
59GO:0004356: glutamate-ammonia ligase activity2.37E-03
60GO:0016853: isomerase activity2.63E-03
61GO:0031593: polyubiquitin binding2.93E-03
62GO:0035252: UDP-xylosyltransferase activity2.93E-03
63GO:0036402: proteasome-activating ATPase activity2.93E-03
64GO:0004197: cysteine-type endopeptidase activity3.22E-03
65GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity3.52E-03
66GO:0004747: ribokinase activity3.52E-03
67GO:0016597: amino acid binding4.12E-03
68GO:0016831: carboxy-lyase activity4.15E-03
69GO:0008235: metalloexopeptidase activity4.15E-03
70GO:0008320: protein transmembrane transporter activity4.15E-03
71GO:0004034: aldose 1-epimerase activity4.82E-03
72GO:0052747: sinapyl alcohol dehydrogenase activity4.82E-03
73GO:0008865: fructokinase activity4.82E-03
74GO:0005515: protein binding4.87E-03
75GO:0004674: protein serine/threonine kinase activity6.00E-03
76GO:0016207: 4-coumarate-CoA ligase activity6.25E-03
77GO:0008889: glycerophosphodiester phosphodiesterase activity6.25E-03
78GO:0071949: FAD binding6.25E-03
79GO:0016491: oxidoreductase activity6.71E-03
80GO:0005507: copper ion binding6.87E-03
81GO:0047617: acyl-CoA hydrolase activity7.03E-03
82GO:0008047: enzyme activator activity7.82E-03
83GO:0004672: protein kinase activity8.31E-03
84GO:0008794: arsenate reductase (glutaredoxin) activity8.66E-03
85GO:0004177: aminopeptidase activity8.66E-03
86GO:0004364: glutathione transferase activity8.93E-03
87GO:0004521: endoribonuclease activity9.52E-03
88GO:0045551: cinnamyl-alcohol dehydrogenase activity9.52E-03
89GO:0005315: inorganic phosphate transmembrane transporter activity1.04E-02
90GO:0000287: magnesium ion binding1.05E-02
91GO:0005509: calcium ion binding1.10E-02
92GO:0051287: NAD binding1.13E-02
93GO:0004175: endopeptidase activity1.13E-02
94GO:0008131: primary amine oxidase activity1.13E-02
95GO:0017025: TBP-class protein binding1.23E-02
96GO:0004190: aspartic-type endopeptidase activity1.23E-02
97GO:0008234: cysteine-type peptidase activity1.39E-02
98GO:0031625: ubiquitin protein ligase binding1.39E-02
99GO:0005385: zinc ion transmembrane transporter activity1.43E-02
100GO:0003954: NADH dehydrogenase activity1.43E-02
101GO:0016301: kinase activity1.45E-02
102GO:0008324: cation transmembrane transporter activity1.53E-02
103GO:0004298: threonine-type endopeptidase activity1.64E-02
104GO:0033612: receptor serine/threonine kinase binding1.64E-02
105GO:0004707: MAP kinase activity1.64E-02
106GO:0016746: transferase activity, transferring acyl groups1.85E-02
107GO:0022891: substrate-specific transmembrane transporter activity1.86E-02
108GO:0003756: protein disulfide isomerase activity1.97E-02
109GO:0003727: single-stranded RNA binding1.97E-02
110GO:0004722: protein serine/threonine phosphatase activity2.00E-02
111GO:0005451: monovalent cation:proton antiporter activity2.21E-02
112GO:0046873: metal ion transmembrane transporter activity2.33E-02
113GO:0015299: solute:proton antiporter activity2.45E-02
114GO:0005516: calmodulin binding2.51E-02
115GO:0048038: quinone binding2.71E-02
116GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.89E-02
117GO:0015385: sodium:proton antiporter activity2.97E-02
118GO:0008483: transaminase activity3.24E-02
119GO:0008237: metallopeptidase activity3.24E-02
120GO:0051213: dioxygenase activity3.52E-02
121GO:0009931: calcium-dependent protein serine/threonine kinase activity3.80E-02
122GO:0004683: calmodulin-dependent protein kinase activity3.95E-02
123GO:0016887: ATPase activity4.00E-02
124GO:0005096: GTPase activator activity4.40E-02
125GO:0030145: manganese ion binding4.71E-02
126GO:0004601: peroxidase activity4.78E-02
127GO:0016788: hydrolase activity, acting on ester bonds4.86E-02
RankGO TermAdjusted P value
1GO:0005785: signal recognition particle receptor complex0.00E+00
2GO:0019822: P4 peroxisome0.00E+00
3GO:0005829: cytosol3.83E-06
4GO:0005777: peroxisome1.02E-05
5GO:0005783: endoplasmic reticulum1.03E-05
6GO:0005886: plasma membrane5.47E-05
7GO:0005773: vacuole1.41E-04
8GO:0031304: intrinsic component of mitochondrial inner membrane5.99E-04
9GO:0005623: cell7.54E-04
10GO:0005789: endoplasmic reticulum membrane9.43E-04
11GO:0046861: glyoxysomal membrane9.72E-04
12GO:0005775: vacuolar lumen1.39E-03
13GO:0000323: lytic vacuole1.39E-03
14GO:0016021: integral component of membrane1.40E-03
15GO:0005839: proteasome core complex1.50E-03
16GO:0031372: UBC13-MMS2 complex1.86E-03
17GO:0005776: autophagosome1.86E-03
18GO:0030904: retromer complex2.93E-03
19GO:0010168: ER body2.93E-03
20GO:0005618: cell wall3.46E-03
21GO:0030173: integral component of Golgi membrane3.52E-03
22GO:0031597: cytosolic proteasome complex3.52E-03
23GO:0016020: membrane3.66E-03
24GO:0005794: Golgi apparatus4.01E-03
25GO:0031595: nuclear proteasome complex4.15E-03
26GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane4.15E-03
27GO:0000421: autophagosome membrane4.82E-03
28GO:0009514: glyoxysome5.52E-03
29GO:0005786: signal recognition particle, endoplasmic reticulum targeting5.52E-03
30GO:0005811: lipid particle5.52E-03
31GO:0008540: proteasome regulatory particle, base subcomplex7.03E-03
32GO:0017119: Golgi transport complex7.82E-03
33GO:0031902: late endosome membrane8.57E-03
34GO:0005765: lysosomal membrane8.66E-03
35GO:0048471: perinuclear region of cytoplasm8.66E-03
36GO:0005622: intracellular1.01E-02
37GO:0005764: lysosome1.13E-02
38GO:0030176: integral component of endoplasmic reticulum membrane1.23E-02
39GO:0000502: proteasome complex1.26E-02
40GO:0005635: nuclear envelope1.35E-02
41GO:0005774: vacuolar membrane1.70E-02
42GO:0031410: cytoplasmic vesicle1.75E-02
43GO:0019898: extrinsic component of membrane2.58E-02
44GO:0005802: trans-Golgi network2.76E-02
45GO:0009570: chloroplast stroma2.81E-02
46GO:0071944: cell periphery2.97E-02
47GO:0032580: Golgi cisterna membrane3.10E-02
48GO:0005778: peroxisomal membrane3.24E-02
49GO:0005788: endoplasmic reticulum lumen3.66E-02
50GO:0005737: cytoplasm4.91E-02
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Gene type



Gene DE type