GO Enrichment Analysis of Co-expressed Genes with
AT3G51140
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 2 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 3 | GO:0042407: cristae formation | 0.00E+00 |
| 4 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 5 | GO:0051085: chaperone mediated protein folding requiring cofactor | 5.94E-07 |
| 6 | GO:0042026: protein refolding | 4.52E-06 |
| 7 | GO:1901259: chloroplast rRNA processing | 4.52E-06 |
| 8 | GO:0006436: tryptophanyl-tRNA aminoacylation | 3.00E-05 |
| 9 | GO:0010028: xanthophyll cycle | 3.00E-05 |
| 10 | GO:0006418: tRNA aminoacylation for protein translation | 6.68E-05 |
| 11 | GO:0006568: tryptophan metabolic process | 7.58E-05 |
| 12 | GO:0006423: cysteinyl-tRNA aminoacylation | 7.58E-05 |
| 13 | GO:2000071: regulation of defense response by callose deposition | 7.58E-05 |
| 14 | GO:0007005: mitochondrion organization | 8.26E-05 |
| 15 | GO:0006760: folic acid-containing compound metabolic process | 1.32E-04 |
| 16 | GO:0006986: response to unfolded protein | 1.97E-04 |
| 17 | GO:0006457: protein folding | 2.06E-04 |
| 18 | GO:0046656: folic acid biosynthetic process | 2.67E-04 |
| 19 | GO:0015995: chlorophyll biosynthetic process | 2.85E-04 |
| 20 | GO:0042793: transcription from plastid promoter | 4.20E-04 |
| 21 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 4.20E-04 |
| 22 | GO:0006458: 'de novo' protein folding | 5.02E-04 |
| 23 | GO:0017148: negative regulation of translation | 5.02E-04 |
| 24 | GO:0046654: tetrahydrofolate biosynthetic process | 5.02E-04 |
| 25 | GO:0052543: callose deposition in cell wall | 6.76E-04 |
| 26 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 6.76E-04 |
| 27 | GO:0009657: plastid organization | 7.68E-04 |
| 28 | GO:0098656: anion transmembrane transport | 8.63E-04 |
| 29 | GO:0043067: regulation of programmed cell death | 9.61E-04 |
| 30 | GO:0006779: porphyrin-containing compound biosynthetic process | 9.61E-04 |
| 31 | GO:1900865: chloroplast RNA modification | 9.61E-04 |
| 32 | GO:0031425: chloroplast RNA processing | 9.61E-04 |
| 33 | GO:0009735: response to cytokinin | 9.86E-04 |
| 34 | GO:0045036: protein targeting to chloroplast | 1.06E-03 |
| 35 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.06E-03 |
| 36 | GO:0009682: induced systemic resistance | 1.16E-03 |
| 37 | GO:0009790: embryo development | 1.37E-03 |
| 38 | GO:0009793: embryo development ending in seed dormancy | 1.49E-03 |
| 39 | GO:0010020: chloroplast fission | 1.50E-03 |
| 40 | GO:0009451: RNA modification | 1.64E-03 |
| 41 | GO:0061077: chaperone-mediated protein folding | 2.11E-03 |
| 42 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 2.25E-03 |
| 43 | GO:0009658: chloroplast organization | 2.46E-03 |
| 44 | GO:0010118: stomatal movement | 2.80E-03 |
| 45 | GO:0010197: polar nucleus fusion | 2.94E-03 |
| 46 | GO:0002229: defense response to oomycetes | 3.40E-03 |
| 47 | GO:0009627: systemic acquired resistance | 4.70E-03 |
| 48 | GO:0048481: plant ovule development | 5.23E-03 |
| 49 | GO:0008219: cell death | 5.23E-03 |
| 50 | GO:0009867: jasmonic acid mediated signaling pathway | 6.16E-03 |
| 51 | GO:0031347: regulation of defense response | 8.38E-03 |
| 52 | GO:0006096: glycolytic process | 1.02E-02 |
| 53 | GO:0009620: response to fungus | 1.09E-02 |
| 54 | GO:0006633: fatty acid biosynthetic process | 1.59E-02 |
| 55 | GO:0006413: translational initiation | 1.62E-02 |
| 56 | GO:0009409: response to cold | 2.18E-02 |
| 57 | GO:0048366: leaf development | 2.61E-02 |
| 58 | GO:0015979: photosynthesis | 2.98E-02 |
| 59 | GO:0006397: mRNA processing | 3.69E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 2 | GO:0051082: unfolded protein binding | 3.04E-08 |
| 3 | GO:0016851: magnesium chelatase activity | 5.94E-07 |
| 4 | GO:0044183: protein binding involved in protein folding | 2.52E-05 |
| 5 | GO:0004830: tryptophan-tRNA ligase activity | 3.00E-05 |
| 6 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 3.00E-05 |
| 7 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 3.00E-05 |
| 8 | GO:0051087: chaperone binding | 6.68E-05 |
| 9 | GO:0004150: dihydroneopterin aldolase activity | 7.58E-05 |
| 10 | GO:0102083: 7,8-dihydromonapterin aldolase activity | 7.58E-05 |
| 11 | GO:0004312: fatty acid synthase activity | 7.58E-05 |
| 12 | GO:0004817: cysteine-tRNA ligase activity | 7.58E-05 |
| 13 | GO:0000774: adenyl-nucleotide exchange factor activity | 7.58E-05 |
| 14 | GO:0004812: aminoacyl-tRNA ligase activity | 1.10E-04 |
| 15 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 1.32E-04 |
| 16 | GO:0043023: ribosomal large subunit binding | 1.97E-04 |
| 17 | GO:0001872: (1->3)-beta-D-glucan binding | 1.97E-04 |
| 18 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 1.97E-04 |
| 19 | GO:0000049: tRNA binding | 1.27E-03 |
| 20 | GO:0005315: inorganic phosphate transmembrane transporter activity | 1.38E-03 |
| 21 | GO:0031072: heat shock protein binding | 1.38E-03 |
| 22 | GO:0003723: RNA binding | 2.34E-03 |
| 23 | GO:0008514: organic anion transmembrane transporter activity | 2.52E-03 |
| 24 | GO:0042803: protein homodimerization activity | 3.81E-03 |
| 25 | GO:0008483: transaminase activity | 4.03E-03 |
| 26 | GO:0004519: endonuclease activity | 4.86E-03 |
| 27 | GO:0030247: polysaccharide binding | 4.88E-03 |
| 28 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 5.23E-03 |
| 29 | GO:0003746: translation elongation factor activity | 6.16E-03 |
| 30 | GO:0016887: ATPase activity | 6.91E-03 |
| 31 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.04E-02 |
| 32 | GO:0005507: copper ion binding | 1.13E-02 |
| 33 | GO:0005525: GTP binding | 1.30E-02 |
| 34 | GO:0030170: pyridoxal phosphate binding | 1.46E-02 |
| 35 | GO:0003743: translation initiation factor activity | 1.90E-02 |
| 36 | GO:0042802: identical protein binding | 2.02E-02 |
| 37 | GO:0004601: peroxidase activity | 2.32E-02 |
| 38 | GO:0003729: mRNA binding | 2.40E-02 |
| 39 | GO:0003924: GTPase activity | 3.58E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.05E-29 |
| 2 | GO:0009570: chloroplast stroma | 8.67E-19 |
| 3 | GO:0009941: chloroplast envelope | 3.33E-11 |
| 4 | GO:0010007: magnesium chelatase complex | 1.32E-04 |
| 5 | GO:0009579: thylakoid | 1.80E-04 |
| 6 | GO:0042646: plastid nucleoid | 1.97E-04 |
| 7 | GO:0009536: plastid | 5.78E-04 |
| 8 | GO:0042644: chloroplast nucleoid | 8.63E-04 |
| 9 | GO:0022626: cytosolic ribosome | 1.04E-03 |
| 10 | GO:0009508: plastid chromosome | 1.38E-03 |
| 11 | GO:0005759: mitochondrial matrix | 1.47E-03 |
| 12 | GO:0010319: stromule | 4.03E-03 |
| 13 | GO:0009295: nucleoid | 4.03E-03 |
| 14 | GO:0030529: intracellular ribonucleoprotein complex | 4.36E-03 |
| 15 | GO:0009707: chloroplast outer membrane | 5.23E-03 |
| 16 | GO:0009534: chloroplast thylakoid | 9.56E-03 |
| 17 | GO:0009706: chloroplast inner membrane | 1.16E-02 |
| 18 | GO:0005739: mitochondrion | 1.20E-02 |
| 19 | GO:0005623: cell | 1.38E-02 |
| 20 | GO:0046658: anchored component of plasma membrane | 2.08E-02 |