co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G50820

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
2	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
3	GO:0071482: cellular response to light stimulus	3.93E-06
4	GO:0018119: peptidyl-cysteine S-nitrosylation	9.33E-06
5	GO:0009773: photosynthetic electron transport in photosystem I	9.33E-06
6	GO:0006096: glycolytic process	1.24E-05
7	GO:0006094: gluconeogenesis	1.31E-05
8	GO:0019253: reductive pentose-phosphate cycle	1.53E-05
9	GO:0043609: regulation of carbon utilization	1.57E-05
10	GO:0006000: fructose metabolic process	7.34E-05
11	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.11E-04
12	GO:0015979: photosynthesis	1.30E-04
13	GO:0045727: positive regulation of translation	1.53E-04
14	GO:0009853: photorespiration	1.77E-04
15	GO:0043097: pyrimidine nucleoside salvage	1.98E-04
16	GO:0000470: maturation of LSU-rRNA	2.47E-04
17	GO:0006206: pyrimidine nucleobase metabolic process	2.47E-04
18	GO:0009854: oxidative photosynthetic carbon pathway	2.97E-04
19	GO:0009772: photosynthetic electron transport in photosystem II	3.49E-04
20	GO:0005978: glycogen biosynthetic process	4.04E-04
21	GO:0032544: plastid translation	4.60E-04
22	GO:0006002: fructose 6-phosphate metabolic process	4.60E-04
23	GO:0000373: Group II intron splicing	5.18E-04
24	GO:0006098: pentose-phosphate shunt	5.18E-04
25	GO:0010205: photoinhibition	5.76E-04
26	GO:0018107: peptidyl-threonine phosphorylation	8.30E-04
27	GO:0061077: chaperone-mediated protein folding	1.25E-03
28	GO:0009686: gibberellin biosynthetic process	1.40E-03
29	GO:0042631: cellular response to water deprivation	1.65E-03
30	GO:0045454: cell redox homeostasis	1.66E-03
31	GO:0010268: brassinosteroid homeostasis	1.73E-03
32	GO:0019252: starch biosynthetic process	1.90E-03
33	GO:0016132: brassinosteroid biosynthetic process	1.99E-03
34	GO:0010193: response to ozone	1.99E-03
35	GO:0016125: sterol metabolic process	2.26E-03
36	GO:0001666: response to hypoxia	2.55E-03
37	GO:0006499: N-terminal protein myristoylation	3.25E-03
38	GO:0006811: ion transport	3.25E-03
39	GO:0009735: response to cytokinin	3.26E-03
40	GO:0009416: response to light stimulus	3.57E-03
41	GO:0006364: rRNA processing	5.21E-03
42	GO:0010224: response to UV-B	5.34E-03
43	GO:0055114: oxidation-reduction process	5.94E-03
44	GO:0018105: peptidyl-serine phosphorylation	6.78E-03
45	GO:0042742: defense response to bacterium	7.19E-03
46	GO:0009058: biosynthetic process	8.06E-03
47	GO:0009409: response to cold	9.73E-03
48	GO:0006810: transport	1.06E-02
49	GO:0046686: response to cadmium ion	1.12E-02
50	GO:0006397: mRNA processing	2.09E-02
51	GO:0009611: response to wounding	3.11E-02
52	GO:0035556: intracellular signal transduction	3.18E-02
53	GO:0045893: positive regulation of transcription, DNA-templated	3.38E-02

Rank	GO Term	Adjusted P value
1	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
2	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
3	GO:0008974: phosphoribulokinase activity	0.00E+00
4	GO:0008465: glycerate dehydrogenase activity	0.00E+00
5	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
6	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
7	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
8	GO:0004332: fructose-bisphosphate aldolase activity	1.07E-06
9	GO:0008266: poly(U) RNA binding	1.53E-05
10	GO:0051777: ent-kaurenoate oxidase activity	1.57E-05
11	GO:0004618: phosphoglycerate kinase activity	4.12E-05
12	GO:0004148: dihydrolipoyl dehydrogenase activity	7.34E-05
13	GO:0008878: glucose-1-phosphate adenylyltransferase activity	1.53E-04
14	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.53E-04
15	GO:0008453: alanine-glyoxylate transaminase activity	1.53E-04
16	GO:2001070: starch binding	2.47E-04
17	GO:0000293: ferric-chelate reductase activity	2.47E-04
18	GO:0004849: uridine kinase activity	2.97E-04
19	GO:0019843: rRNA binding	5.51E-04
20	GO:0003954: NADH dehydrogenase activity	1.10E-03
21	GO:0005528: FK506 binding	1.10E-03
22	GO:0050662: coenzyme binding	1.82E-03
23	GO:0048038: quinone binding	1.99E-03
24	GO:0050897: cobalt ion binding	3.36E-03
25	GO:0030145: manganese ion binding	3.36E-03
26	GO:0003746: translation elongation factor activity	3.58E-03
27	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.72E-03
28	GO:0051287: NAD binding	4.84E-03
29	GO:0016491: oxidoreductase activity	9.46E-03
30	GO:0005524: ATP binding	1.12E-02
31	GO:0042802: identical protein binding	1.15E-02
32	GO:0003723: RNA binding	1.29E-02
33	GO:0050660: flavin adenine dinucleotide binding	1.47E-02
34	GO:0005515: protein binding	1.96E-02
35	GO:0005507: copper ion binding	3.94E-02
36	GO:0019825: oxygen binding	3.94E-02
37	GO:0005525: GTP binding	4.36E-02
38	GO:0005506: iron ion binding	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	8.80E-11
2	GO:0009535: chloroplast thylakoid membrane	1.51E-10
3	GO:0009941: chloroplast envelope	4.08E-09
4	GO:0009579: thylakoid	5.04E-08
5	GO:0009570: chloroplast stroma	3.34E-07
6	GO:0048046: apoplast	7.19E-07
7	GO:0009534: chloroplast thylakoid	1.80E-06
8	GO:0030095: chloroplast photosystem II	1.53E-05
9	GO:0031304: intrinsic component of mitochondrial inner membrane	4.12E-05
10	GO:0010319: stromule	9.01E-05
11	GO:0009533: chloroplast stromal thylakoid	3.49E-04
12	GO:0009538: photosystem I reaction center	4.04E-04
13	GO:0005777: peroxisome	4.78E-04
14	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	5.18E-04
15	GO:0009543: chloroplast thylakoid lumen	5.51E-04
16	GO:0042651: thylakoid membrane	1.18E-03
17	GO:0009523: photosystem II	1.90E-03
18	GO:0030529: intracellular ribonucleoprotein complex	2.55E-03
19	GO:0016020: membrane	4.65E-03
20	GO:0005829: cytosol	5.65E-03
21	GO:0005747: mitochondrial respiratory chain complex I	5.98E-03
22	GO:0010287: plastoglobule	7.48E-03
23	GO:0005759: mitochondrial matrix	9.10E-03
24	GO:0022625: cytosolic large ribosomal subunit	1.60E-02