GO Enrichment Analysis of Co-expressed Genes with
AT3G50530
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
| 2 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 3 | GO:0045860: positive regulation of protein kinase activity | 0.00E+00 |
| 4 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 5 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 6 | GO:0006154: adenosine catabolic process | 0.00E+00 |
| 7 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 8 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 9 | GO:0009913: epidermal cell differentiation | 2.84E-07 |
| 10 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 8.93E-06 |
| 11 | GO:0008610: lipid biosynthetic process | 9.94E-05 |
| 12 | GO:0015969: guanosine tetraphosphate metabolic process | 1.44E-04 |
| 13 | GO:0015808: L-alanine transport | 1.44E-04 |
| 14 | GO:0010480: microsporocyte differentiation | 1.44E-04 |
| 15 | GO:0031338: regulation of vesicle fusion | 1.44E-04 |
| 16 | GO:0006148: inosine catabolic process | 1.44E-04 |
| 17 | GO:0034757: negative regulation of iron ion transport | 1.44E-04 |
| 18 | GO:0009773: photosynthetic electron transport in photosystem I | 2.54E-04 |
| 19 | GO:0005983: starch catabolic process | 2.93E-04 |
| 20 | GO:0010271: regulation of chlorophyll catabolic process | 3.29E-04 |
| 21 | GO:0098712: L-glutamate import across plasma membrane | 3.29E-04 |
| 22 | GO:0015804: neutral amino acid transport | 3.29E-04 |
| 23 | GO:0080117: secondary growth | 5.40E-04 |
| 24 | GO:0006518: peptide metabolic process | 5.40E-04 |
| 25 | GO:0090630: activation of GTPase activity | 5.40E-04 |
| 26 | GO:0009416: response to light stimulus | 7.47E-04 |
| 27 | GO:0051639: actin filament network formation | 7.73E-04 |
| 28 | GO:0009067: aspartate family amino acid biosynthetic process | 7.73E-04 |
| 29 | GO:0051764: actin crosslink formation | 1.02E-03 |
| 30 | GO:0031122: cytoplasmic microtubule organization | 1.02E-03 |
| 31 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 1.02E-03 |
| 32 | GO:0010021: amylopectin biosynthetic process | 1.02E-03 |
| 33 | GO:0048825: cotyledon development | 1.16E-03 |
| 34 | GO:0019252: starch biosynthetic process | 1.16E-03 |
| 35 | GO:0016120: carotene biosynthetic process | 1.29E-03 |
| 36 | GO:0006656: phosphatidylcholine biosynthetic process | 1.29E-03 |
| 37 | GO:0048497: maintenance of floral organ identity | 1.29E-03 |
| 38 | GO:0048831: regulation of shoot system development | 1.59E-03 |
| 39 | GO:0042549: photosystem II stabilization | 1.59E-03 |
| 40 | GO:0010256: endomembrane system organization | 1.59E-03 |
| 41 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.59E-03 |
| 42 | GO:0016126: sterol biosynthetic process | 1.78E-03 |
| 43 | GO:0009942: longitudinal axis specification | 1.91E-03 |
| 44 | GO:0048509: regulation of meristem development | 1.91E-03 |
| 45 | GO:0009088: threonine biosynthetic process | 1.91E-03 |
| 46 | GO:0015995: chlorophyll biosynthetic process | 2.09E-03 |
| 47 | GO:0043090: amino acid import | 2.24E-03 |
| 48 | GO:0048437: floral organ development | 2.24E-03 |
| 49 | GO:0071482: cellular response to light stimulus | 2.96E-03 |
| 50 | GO:0009827: plant-type cell wall modification | 2.96E-03 |
| 51 | GO:0048507: meristem development | 3.35E-03 |
| 52 | GO:0048589: developmental growth | 3.35E-03 |
| 53 | GO:0016310: phosphorylation | 3.75E-03 |
| 54 | GO:0009638: phototropism | 3.76E-03 |
| 55 | GO:0006779: porphyrin-containing compound biosynthetic process | 3.76E-03 |
| 56 | GO:0006782: protoporphyrinogen IX biosynthetic process | 4.18E-03 |
| 57 | GO:0019538: protein metabolic process | 4.18E-03 |
| 58 | GO:0006535: cysteine biosynthetic process from serine | 4.18E-03 |
| 59 | GO:0045036: protein targeting to chloroplast | 4.18E-03 |
| 60 | GO:0000038: very long-chain fatty acid metabolic process | 4.61E-03 |
| 61 | GO:0009089: lysine biosynthetic process via diaminopimelate | 4.61E-03 |
| 62 | GO:1903507: negative regulation of nucleic acid-templated transcription | 4.61E-03 |
| 63 | GO:0048229: gametophyte development | 4.61E-03 |
| 64 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.64E-03 |
| 65 | GO:0006468: protein phosphorylation | 4.93E-03 |
| 66 | GO:0010152: pollen maturation | 5.06E-03 |
| 67 | GO:0010102: lateral root morphogenesis | 5.52E-03 |
| 68 | GO:0009785: blue light signaling pathway | 5.52E-03 |
| 69 | GO:0018107: peptidyl-threonine phosphorylation | 5.52E-03 |
| 70 | GO:0009718: anthocyanin-containing compound biosynthetic process | 5.52E-03 |
| 71 | GO:0010075: regulation of meristem growth | 5.52E-03 |
| 72 | GO:0046686: response to cadmium ion | 5.56E-03 |
| 73 | GO:0009934: regulation of meristem structural organization | 6.00E-03 |
| 74 | GO:0006636: unsaturated fatty acid biosynthetic process | 7.00E-03 |
| 75 | GO:0018105: peptidyl-serine phosphorylation | 7.39E-03 |
| 76 | GO:0051017: actin filament bundle assembly | 7.52E-03 |
| 77 | GO:0019344: cysteine biosynthetic process | 7.52E-03 |
| 78 | GO:0009753: response to jasmonic acid | 7.98E-03 |
| 79 | GO:0008299: isoprenoid biosynthetic process | 8.06E-03 |
| 80 | GO:0008152: metabolic process | 8.26E-03 |
| 81 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 9.17E-03 |
| 82 | GO:0009845: seed germination | 9.73E-03 |
| 83 | GO:0071215: cellular response to abscisic acid stimulus | 9.75E-03 |
| 84 | GO:0009686: gibberellin biosynthetic process | 9.75E-03 |
| 85 | GO:0048443: stamen development | 1.03E-02 |
| 86 | GO:0070417: cellular response to cold | 1.09E-02 |
| 87 | GO:0006633: fatty acid biosynthetic process | 1.13E-02 |
| 88 | GO:0042335: cuticle development | 1.16E-02 |
| 89 | GO:0010051: xylem and phloem pattern formation | 1.16E-02 |
| 90 | GO:0010087: phloem or xylem histogenesis | 1.16E-02 |
| 91 | GO:0048653: anther development | 1.16E-02 |
| 92 | GO:0009733: response to auxin | 1.19E-02 |
| 93 | GO:0010268: brassinosteroid homeostasis | 1.22E-02 |
| 94 | GO:0045489: pectin biosynthetic process | 1.22E-02 |
| 95 | GO:0010305: leaf vascular tissue pattern formation | 1.22E-02 |
| 96 | GO:0009791: post-embryonic development | 1.35E-02 |
| 97 | GO:0016132: brassinosteroid biosynthetic process | 1.41E-02 |
| 98 | GO:0007166: cell surface receptor signaling pathway | 1.42E-02 |
| 99 | GO:1901657: glycosyl compound metabolic process | 1.55E-02 |
| 100 | GO:0009611: response to wounding | 1.56E-02 |
| 101 | GO:0016125: sterol metabolic process | 1.62E-02 |
| 102 | GO:0035556: intracellular signal transduction | 1.62E-02 |
| 103 | GO:0010027: thylakoid membrane organization | 1.84E-02 |
| 104 | GO:0005975: carbohydrate metabolic process | 1.87E-02 |
| 105 | GO:0010029: regulation of seed germination | 1.91E-02 |
| 106 | GO:0009816: defense response to bacterium, incompatible interaction | 1.91E-02 |
| 107 | GO:0009817: defense response to fungus, incompatible interaction | 2.22E-02 |
| 108 | GO:0030244: cellulose biosynthetic process | 2.22E-02 |
| 109 | GO:0000160: phosphorelay signal transduction system | 2.30E-02 |
| 110 | GO:0009834: plant-type secondary cell wall biogenesis | 2.38E-02 |
| 111 | GO:0009631: cold acclimation | 2.46E-02 |
| 112 | GO:0046777: protein autophosphorylation | 2.56E-02 |
| 113 | GO:0030001: metal ion transport | 2.88E-02 |
| 114 | GO:0006869: lipid transport | 3.14E-02 |
| 115 | GO:0009636: response to toxic substance | 3.42E-02 |
| 116 | GO:0016042: lipid catabolic process | 3.43E-02 |
| 117 | GO:0031347: regulation of defense response | 3.60E-02 |
| 118 | GO:0006364: rRNA processing | 3.89E-02 |
| 119 | GO:0009736: cytokinin-activated signaling pathway | 3.89E-02 |
| 120 | GO:0009909: regulation of flower development | 4.18E-02 |
| 121 | GO:0009624: response to nematode | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010303: limit dextrinase activity | 0.00E+00 |
| 2 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 3 | GO:0051060: pullulanase activity | 0.00E+00 |
| 4 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 5 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 6 | GO:0052667: phosphomethylethanolamine N-methyltransferase activity | 0.00E+00 |
| 7 | GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity | 0.00E+00 |
| 8 | GO:0004676: 3-phosphoinositide-dependent protein kinase activity | 0.00E+00 |
| 9 | GO:0004163: diphosphomevalonate decarboxylase activity | 0.00E+00 |
| 10 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 11 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 12 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.67E-05 |
| 13 | GO:0015194: L-serine transmembrane transporter activity | 1.44E-04 |
| 14 | GO:0050308: sugar-phosphatase activity | 1.44E-04 |
| 15 | GO:0051777: ent-kaurenoate oxidase activity | 1.44E-04 |
| 16 | GO:0004856: xylulokinase activity | 1.44E-04 |
| 17 | GO:0008568: microtubule-severing ATPase activity | 1.44E-04 |
| 18 | GO:0019203: carbohydrate phosphatase activity | 1.44E-04 |
| 19 | GO:0030941: chloroplast targeting sequence binding | 1.44E-04 |
| 20 | GO:0047622: adenosine nucleosidase activity | 1.44E-04 |
| 21 | GO:0005524: ATP binding | 1.64E-04 |
| 22 | GO:0033201: alpha-1,4-glucan synthase activity | 3.29E-04 |
| 23 | GO:0004312: fatty acid synthase activity | 3.29E-04 |
| 24 | GO:0009884: cytokinin receptor activity | 3.29E-04 |
| 25 | GO:0019172: glyoxalase III activity | 3.29E-04 |
| 26 | GO:0008728: GTP diphosphokinase activity | 3.29E-04 |
| 27 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 3.29E-04 |
| 28 | GO:0015180: L-alanine transmembrane transporter activity | 3.29E-04 |
| 29 | GO:0050017: L-3-cyanoalanine synthase activity | 3.29E-04 |
| 30 | GO:0047724: inosine nucleosidase activity | 3.29E-04 |
| 31 | GO:0004672: protein kinase activity | 3.53E-04 |
| 32 | GO:0042802: identical protein binding | 4.25E-04 |
| 33 | GO:0004373: glycogen (starch) synthase activity | 5.40E-04 |
| 34 | GO:0004148: dihydrolipoyl dehydrogenase activity | 5.40E-04 |
| 35 | GO:0015193: L-proline transmembrane transporter activity | 5.40E-04 |
| 36 | GO:0005034: osmosensor activity | 5.40E-04 |
| 37 | GO:0070402: NADPH binding | 5.40E-04 |
| 38 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 5.40E-04 |
| 39 | GO:0015186: L-glutamine transmembrane transporter activity | 7.73E-04 |
| 40 | GO:0004072: aspartate kinase activity | 7.73E-04 |
| 41 | GO:0019201: nucleotide kinase activity | 7.73E-04 |
| 42 | GO:0015175: neutral amino acid transmembrane transporter activity | 7.73E-04 |
| 43 | GO:0016301: kinase activity | 8.35E-04 |
| 44 | GO:0005313: L-glutamate transmembrane transporter activity | 1.02E-03 |
| 45 | GO:0004506: squalene monooxygenase activity | 1.02E-03 |
| 46 | GO:0009011: starch synthase activity | 1.02E-03 |
| 47 | GO:0010011: auxin binding | 1.02E-03 |
| 48 | GO:0051861: glycolipid binding | 1.02E-03 |
| 49 | GO:0048038: quinone binding | 1.24E-03 |
| 50 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.29E-03 |
| 51 | GO:0017137: Rab GTPase binding | 1.29E-03 |
| 52 | GO:0042578: phosphoric ester hydrolase activity | 1.59E-03 |
| 53 | GO:0004556: alpha-amylase activity | 1.59E-03 |
| 54 | GO:0004462: lactoylglutathione lyase activity | 1.59E-03 |
| 55 | GO:2001070: starch binding | 1.59E-03 |
| 56 | GO:0070300: phosphatidic acid binding | 1.91E-03 |
| 57 | GO:0004017: adenylate kinase activity | 1.91E-03 |
| 58 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.91E-03 |
| 59 | GO:0019900: kinase binding | 1.91E-03 |
| 60 | GO:0004124: cysteine synthase activity | 1.91E-03 |
| 61 | GO:0008289: lipid binding | 2.36E-03 |
| 62 | GO:0004033: aldo-keto reductase (NADP) activity | 2.60E-03 |
| 63 | GO:0043022: ribosome binding | 2.60E-03 |
| 64 | GO:0016787: hydrolase activity | 2.87E-03 |
| 65 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 3.35E-03 |
| 66 | GO:0004673: protein histidine kinase activity | 4.18E-03 |
| 67 | GO:0015386: potassium:proton antiporter activity | 4.61E-03 |
| 68 | GO:0004674: protein serine/threonine kinase activity | 5.05E-03 |
| 69 | GO:0000155: phosphorelay sensor kinase activity | 5.52E-03 |
| 70 | GO:0003779: actin binding | 6.97E-03 |
| 71 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 7.00E-03 |
| 72 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 7.00E-03 |
| 73 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 7.00E-03 |
| 74 | GO:0005528: FK506 binding | 7.52E-03 |
| 75 | GO:0003714: transcription corepressor activity | 7.52E-03 |
| 76 | GO:0043424: protein histidine kinase binding | 8.06E-03 |
| 77 | GO:0015079: potassium ion transmembrane transporter activity | 8.06E-03 |
| 78 | GO:0004707: MAP kinase activity | 8.61E-03 |
| 79 | GO:0033612: receptor serine/threonine kinase binding | 8.61E-03 |
| 80 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.16E-02 |
| 81 | GO:0016853: isomerase activity | 1.28E-02 |
| 82 | GO:0019901: protein kinase binding | 1.35E-02 |
| 83 | GO:0004518: nuclease activity | 1.48E-02 |
| 84 | GO:0051015: actin filament binding | 1.55E-02 |
| 85 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.58E-02 |
| 86 | GO:0016413: O-acetyltransferase activity | 1.76E-02 |
| 87 | GO:0016597: amino acid binding | 1.76E-02 |
| 88 | GO:0016788: hydrolase activity, acting on ester bonds | 1.97E-02 |
| 89 | GO:0102483: scopolin beta-glucosidase activity | 2.06E-02 |
| 90 | GO:0004721: phosphoprotein phosphatase activity | 2.06E-02 |
| 91 | GO:0050660: flavin adenine dinucleotide binding | 2.23E-02 |
| 92 | GO:0005096: GTPase activator activity | 2.30E-02 |
| 93 | GO:0004222: metalloendopeptidase activity | 2.38E-02 |
| 94 | GO:0050897: cobalt ion binding | 2.46E-02 |
| 95 | GO:0030145: manganese ion binding | 2.46E-02 |
| 96 | GO:0003746: translation elongation factor activity | 2.63E-02 |
| 97 | GO:0052689: carboxylic ester hydrolase activity | 2.65E-02 |
| 98 | GO:0008422: beta-glucosidase activity | 2.80E-02 |
| 99 | GO:0004871: signal transducer activity | 3.00E-02 |
| 100 | GO:0035091: phosphatidylinositol binding | 3.33E-02 |
| 101 | GO:0015293: symporter activity | 3.42E-02 |
| 102 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.51E-02 |
| 103 | GO:0046872: metal ion binding | 3.91E-02 |
| 104 | GO:0015171: amino acid transmembrane transporter activity | 4.18E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043224: nuclear SCF ubiquitin ligase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 7.76E-11 |
| 3 | GO:0009570: chloroplast stroma | 1.57E-08 |
| 4 | GO:0009941: chloroplast envelope | 1.36E-04 |
| 5 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.53E-04 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 2.44E-04 |
| 7 | GO:0032432: actin filament bundle | 7.73E-04 |
| 8 | GO:0031359: integral component of chloroplast outer membrane | 2.24E-03 |
| 9 | GO:0009501: amyloplast | 2.60E-03 |
| 10 | GO:0031969: chloroplast membrane | 4.45E-03 |
| 11 | GO:0009534: chloroplast thylakoid | 4.55E-03 |
| 12 | GO:0005884: actin filament | 4.61E-03 |
| 13 | GO:0005886: plasma membrane | 6.60E-03 |
| 14 | GO:0042651: thylakoid membrane | 8.06E-03 |
| 15 | GO:0010287: plastoglobule | 8.51E-03 |
| 16 | GO:0016021: integral component of membrane | 1.73E-02 |
| 17 | GO:0009707: chloroplast outer membrane | 2.22E-02 |
| 18 | GO:0005747: mitochondrial respiratory chain complex I | 4.48E-02 |
| 19 | GO:0009505: plant-type cell wall | 4.82E-02 |
| 20 | GO:0012505: endomembrane system | 4.89E-02 |