co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G50210

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046292: formaldehyde metabolic process	0.00E+00
2	GO:0006983: ER overload response	0.00E+00
3	GO:0006069: ethanol oxidation	0.00E+00
4	GO:0010398: xylogalacturonan metabolic process	0.00E+00
5	GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway	0.00E+00
6	GO:0043069: negative regulation of programmed cell death	2.99E-06
7	GO:0010150: leaf senescence	1.50E-05
8	GO:0010200: response to chitin	7.23E-05
9	GO:0006605: protein targeting	7.29E-05
10	GO:0080136: priming of cellular response to stress	1.18E-04
11	GO:0048508: embryonic meristem development	1.18E-04
12	GO:0006805: xenobiotic metabolic process	1.18E-04
13	GO:0006807: nitrogen compound metabolic process	2.53E-04
14	GO:0006212: uracil catabolic process	2.73E-04
15	GO:0009945: radial axis specification	2.73E-04
16	GO:0043066: negative regulation of apoptotic process	2.73E-04
17	GO:0019483: beta-alanine biosynthetic process	2.73E-04
18	GO:1902000: homogentisate catabolic process	2.73E-04
19	GO:0019441: tryptophan catabolic process to kynurenine	2.73E-04
20	GO:0002221: pattern recognition receptor signaling pathway	2.73E-04
21	GO:1905182: positive regulation of urease activity	2.73E-04
22	GO:0051262: protein tetramerization	2.73E-04
23	GO:0009072: aromatic amino acid family metabolic process	4.52E-04
24	GO:1900055: regulation of leaf senescence	4.52E-04
25	GO:1900140: regulation of seedling development	4.52E-04
26	GO:0010359: regulation of anion channel activity	4.52E-04
27	GO:0061158: 3'-UTR-mediated mRNA destabilization	4.52E-04
28	GO:0080055: low-affinity nitrate transport	4.52E-04
29	GO:0071494: cellular response to UV-C	4.52E-04
30	GO:0072334: UDP-galactose transmembrane transport	6.47E-04
31	GO:0009399: nitrogen fixation	6.47E-04
32	GO:0001676: long-chain fatty acid metabolic process	6.47E-04
33	GO:0006624: vacuolar protein processing	6.47E-04
34	GO:0007231: osmosensory signaling pathway	6.47E-04
35	GO:2001289: lipid X metabolic process	6.47E-04
36	GO:0006662: glycerol ether metabolic process	7.83E-04
37	GO:0006468: protein phosphorylation	8.57E-04
38	GO:1902584: positive regulation of response to water deprivation	8.60E-04
39	GO:0033500: carbohydrate homeostasis	8.60E-04
40	GO:2000038: regulation of stomatal complex development	8.60E-04
41	GO:0010188: response to microbial phytotoxin	8.60E-04
42	GO:0080142: regulation of salicylic acid biosynthetic process	8.60E-04
43	GO:0006542: glutamine biosynthetic process	8.60E-04
44	GO:0010222: stem vascular tissue pattern formation	8.60E-04
45	GO:0060548: negative regulation of cell death	8.60E-04
46	GO:0016094: polyprenol biosynthetic process	1.08E-03
47	GO:0030308: negative regulation of cell growth	1.08E-03
48	GO:0045927: positive regulation of growth	1.08E-03
49	GO:0006090: pyruvate metabolic process	1.08E-03
50	GO:0031365: N-terminal protein amino acid modification	1.08E-03
51	GO:0006914: autophagy	1.15E-03
52	GO:1902456: regulation of stomatal opening	1.33E-03
53	GO:1900425: negative regulation of defense response to bacterium	1.33E-03
54	GO:0006014: D-ribose metabolic process	1.33E-03
55	GO:0006751: glutathione catabolic process	1.33E-03
56	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	1.33E-03
57	GO:0042128: nitrate assimilation	1.52E-03
58	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.59E-03
59	GO:0034389: lipid particle organization	1.59E-03
60	GO:0006694: steroid biosynthetic process	1.59E-03
61	GO:0009942: longitudinal axis specification	1.59E-03
62	GO:2000037: regulation of stomatal complex patterning	1.59E-03
63	GO:0015977: carbon fixation	1.59E-03
64	GO:0008219: cell death	1.77E-03
65	GO:0043090: amino acid import	1.87E-03
66	GO:0080186: developmental vegetative growth	1.87E-03
67	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.87E-03
68	GO:0050790: regulation of catalytic activity	1.87E-03
69	GO:0006499: N-terminal protein myristoylation	1.94E-03
70	GO:0009738: abscisic acid-activated signaling pathway	2.13E-03
71	GO:0009819: drought recovery	2.16E-03
72	GO:1900150: regulation of defense response to fungus	2.16E-03
73	GO:0016559: peroxisome fission	2.16E-03
74	GO:0009611: response to wounding	2.32E-03
75	GO:0034599: cellular response to oxidative stress	2.33E-03
76	GO:0006002: fructose 6-phosphate metabolic process	2.46E-03
77	GO:0010120: camalexin biosynthetic process	2.46E-03
78	GO:0043562: cellular response to nitrogen levels	2.46E-03
79	GO:0009051: pentose-phosphate shunt, oxidative branch	2.78E-03
80	GO:0009821: alkaloid biosynthetic process	2.78E-03
81	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	3.12E-03
82	GO:0046777: protein autophosphorylation	3.42E-03
83	GO:0000103: sulfate assimilation	3.46E-03
84	GO:0000038: very long-chain fatty acid metabolic process	3.82E-03
85	GO:0072593: reactive oxygen species metabolic process	3.82E-03
86	GO:0043085: positive regulation of catalytic activity	3.82E-03
87	GO:0030148: sphingolipid biosynthetic process	3.82E-03
88	GO:0045454: cell redox homeostasis	3.94E-03
89	GO:0051603: proteolysis involved in cellular protein catabolic process	3.98E-03
90	GO:0015706: nitrate transport	4.19E-03
91	GO:0000266: mitochondrial fission	4.19E-03
92	GO:0010102: lateral root morphogenesis	4.57E-03
93	GO:0006108: malate metabolic process	4.57E-03
94	GO:0010229: inflorescence development	4.57E-03
95	GO:0009626: plant-type hypersensitive response	4.83E-03
96	GO:0007034: vacuolar transport	4.97E-03
97	GO:0009751: response to salicylic acid	5.05E-03
98	GO:0016569: covalent chromatin modification	5.14E-03
99	GO:0070588: calcium ion transmembrane transport	5.37E-03
100	GO:0010053: root epidermal cell differentiation	5.37E-03
101	GO:2000377: regulation of reactive oxygen species metabolic process	6.22E-03
102	GO:0051260: protein homooligomerization	7.11E-03
103	GO:0007005: mitochondrion organization	7.57E-03
104	GO:0010227: floral organ abscission	8.05E-03
105	GO:0015031: protein transport	9.42E-03
106	GO:0045489: pectin biosynthetic process	1.00E-02
107	GO:0050832: defense response to fungus	1.05E-02
108	GO:0048544: recognition of pollen	1.06E-02
109	GO:0006470: protein dephosphorylation	1.08E-02
110	GO:0007166: cell surface receptor signaling pathway	1.08E-02
111	GO:0010183: pollen tube guidance	1.11E-02
112	GO:0019252: starch biosynthetic process	1.11E-02
113	GO:0010468: regulation of gene expression	1.13E-02
114	GO:0009617: response to bacterium	1.13E-02
115	GO:0010193: response to ozone	1.16E-02
116	GO:0000302: response to reactive oxygen species	1.16E-02
117	GO:0007264: small GTPase mediated signal transduction	1.22E-02
118	GO:0031047: gene silencing by RNA	1.22E-02
119	GO:0010286: heat acclimation	1.39E-02
120	GO:0051607: defense response to virus	1.45E-02
121	GO:0009615: response to virus	1.51E-02
122	GO:0006970: response to osmotic stress	1.58E-02
123	GO:0006974: cellular response to DNA damage stimulus	1.63E-02
124	GO:0009723: response to ethylene	1.69E-02
125	GO:0048481: plant ovule development	1.82E-02
126	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.88E-02
127	GO:0009407: toxin catabolic process	1.96E-02
128	GO:0010119: regulation of stomatal movement	2.02E-02
129	GO:0006865: amino acid transport	2.09E-02
130	GO:0006099: tricarboxylic acid cycle	2.23E-02
131	GO:0006631: fatty acid metabolic process	2.44E-02
132	GO:0042742: defense response to bacterium	2.60E-02
133	GO:0009636: response to toxic substance	2.81E-02
134	GO:0009753: response to jasmonic acid	2.88E-02
135	GO:0006952: defense response	3.05E-02
136	GO:0006486: protein glycosylation	3.20E-02
137	GO:0010224: response to UV-B	3.28E-02
138	GO:0006857: oligopeptide transport	3.36E-02
139	GO:0006508: proteolysis	3.50E-02
140	GO:0006096: glycolytic process	3.60E-02
141	GO:0048316: seed development	3.68E-02
142	GO:0009409: response to cold	3.78E-02
143	GO:0009620: response to fungus	3.85E-02
144	GO:0018105: peptidyl-serine phosphorylation	4.19E-02
145	GO:0009742: brassinosteroid mediated signaling pathway	4.28E-02
146	GO:0009555: pollen development	4.74E-02
147	GO:0009058: biosynthetic process	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0003837: beta-ureidopropionase activity	0.00E+00
2	GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity	0.00E+00
3	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
4	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
5	GO:0080007: S-nitrosoglutathione reductase activity	0.00E+00
6	GO:0005524: ATP binding	2.19E-06
7	GO:0004714: transmembrane receptor protein tyrosine kinase activity	7.29E-05
8	GO:0015085: calcium ion transmembrane transporter activity	1.18E-04
9	GO:0004112: cyclic-nucleotide phosphodiesterase activity	1.18E-04
10	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	1.18E-04
11	GO:0019786: Atg8-specific protease activity	1.18E-04
12	GO:0019707: protein-cysteine S-acyltransferase activity	1.18E-04
13	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	2.53E-04
14	GO:0019779: Atg8 activating enzyme activity	2.73E-04
15	GO:0045140: inositol phosphoceramide synthase activity	2.73E-04
16	GO:0004061: arylformamidase activity	2.73E-04
17	GO:0016301: kinase activity	3.29E-04
18	GO:0005047: signal recognition particle binding	4.52E-04
19	GO:0016174: NAD(P)H oxidase activity	4.52E-04
20	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	4.52E-04
21	GO:0008964: phosphoenolpyruvate carboxylase activity	4.52E-04
22	GO:0003840: gamma-glutamyltransferase activity	4.52E-04
23	GO:0036374: glutathione hydrolase activity	4.52E-04
24	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	4.52E-04
25	GO:0080054: low-affinity nitrate transmembrane transporter activity	4.52E-04
26	GO:0016151: nickel cation binding	4.52E-04
27	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	6.47E-04
28	GO:0047134: protein-disulfide reductase activity	6.76E-04
29	GO:0005515: protein binding	8.15E-04
30	GO:0004791: thioredoxin-disulfide reductase activity	8.40E-04
31	GO:0004470: malic enzyme activity	8.60E-04
32	GO:0019776: Atg8 ligase activity	8.60E-04
33	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	8.60E-04
34	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	8.60E-04
35	GO:0004197: cysteine-type endopeptidase activity	1.02E-03
36	GO:0005459: UDP-galactose transmembrane transporter activity	1.08E-03
37	GO:0008948: oxaloacetate decarboxylase activity	1.08E-03
38	GO:0002094: polyprenyltransferase activity	1.08E-03
39	GO:0005496: steroid binding	1.08E-03
40	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.08E-03
41	GO:0004356: glutamate-ammonia ligase activity	1.08E-03
42	GO:0008420: CTD phosphatase activity	1.33E-03
43	GO:0035252: UDP-xylosyltransferase activity	1.33E-03
44	GO:0102391: decanoate--CoA ligase activity	1.59E-03
45	GO:0004012: phospholipid-translocating ATPase activity	1.59E-03
46	GO:0004747: ribokinase activity	1.59E-03
47	GO:0008235: metalloexopeptidase activity	1.87E-03
48	GO:0003872: 6-phosphofructokinase activity	1.87E-03
49	GO:0008320: protein transmembrane transporter activity	1.87E-03
50	GO:0004467: long-chain fatty acid-CoA ligase activity	1.87E-03
51	GO:0008865: fructokinase activity	2.16E-03
52	GO:0004674: protein serine/threonine kinase activity	2.75E-03
53	GO:0004672: protein kinase activity	3.08E-03
54	GO:0016844: strictosidine synthase activity	3.12E-03
55	GO:0015293: symporter activity	3.21E-03
56	GO:0004177: aminopeptidase activity	3.82E-03
57	GO:0005388: calcium-transporting ATPase activity	4.57E-03
58	GO:0004022: alcohol dehydrogenase (NAD) activity	4.57E-03
59	GO:0005525: GTP binding	4.78E-03
60	GO:0004175: endopeptidase activity	4.97E-03
61	GO:0003924: GTPase activity	5.14E-03
62	GO:0015035: protein disulfide oxidoreductase activity	5.62E-03
63	GO:0003954: NADH dehydrogenase activity	6.22E-03
64	GO:0004707: MAP kinase activity	7.11E-03
65	GO:0033612: receptor serine/threonine kinase binding	7.11E-03
66	GO:0019706: protein-cysteine S-palmitoyltransferase activity	7.11E-03
67	GO:0003727: single-stranded RNA binding	8.53E-03
68	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	8.79E-03
69	GO:0001085: RNA polymerase II transcription factor binding	1.00E-02
70	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.39E-02
71	GO:0000287: magnesium ion binding	1.44E-02
72	GO:0004601: peroxidase activity	1.46E-02
73	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.63E-02
74	GO:0004683: calmodulin-dependent protein kinase activity	1.70E-02
75	GO:0005516: calmodulin binding	1.79E-02
76	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.02E-02
77	GO:0005509: calcium ion binding	2.35E-02
78	GO:0042393: histone binding	2.37E-02
79	GO:0004364: glutathione transferase activity	2.51E-02
80	GO:0005198: structural molecule activity	2.81E-02
81	GO:0051287: NAD binding	2.96E-02
82	GO:0015171: amino acid transmembrane transporter activity	3.44E-02
83	GO:0008234: cysteine-type peptidase activity	3.44E-02
84	GO:0004386: helicase activity	4.37E-02
85	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0005886: plasma membrane	3.04E-07
3	GO:0016021: integral component of membrane	2.63E-05
4	GO:0005783: endoplasmic reticulum	4.76E-05
5	GO:0000421: autophagosome membrane	7.29E-05
6	GO:0000138: Golgi trans cisterna	1.18E-04
7	GO:0031304: intrinsic component of mitochondrial inner membrane	2.73E-04
8	GO:0046861: glyoxysomal membrane	4.52E-04
9	GO:0030139: endocytic vesicle	4.52E-04
10	GO:0031410: cytoplasmic vesicle	5.29E-04
11	GO:0005777: peroxisome	5.84E-04
12	GO:0000323: lytic vacuole	6.47E-04
13	GO:0005775: vacuolar lumen	6.47E-04
14	GO:0005776: autophagosome	8.60E-04
15	GO:0005802: trans-Golgi network	1.05E-03
16	GO:0005945: 6-phosphofructokinase complex	1.08E-03
17	GO:0000164: protein phosphatase type 1 complex	1.08E-03
18	GO:0005778: peroxisomal membrane	1.22E-03
19	GO:0030173: integral component of Golgi membrane	1.59E-03
20	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	1.87E-03
21	GO:0009514: glyoxysome	2.46E-03
22	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	2.46E-03
23	GO:0005811: lipid particle	2.46E-03
24	GO:0005773: vacuole	3.24E-03
25	GO:0005789: endoplasmic reticulum membrane	3.31E-03
26	GO:0005829: cytosol	3.43E-03
27	GO:0005764: lysosome	4.97E-03
28	GO:0030176: integral component of endoplasmic reticulum membrane	5.37E-03
29	GO:0005768: endosome	5.58E-03
30	GO:0005769: early endosome	5.79E-03
31	GO:0005623: cell	7.01E-03
32	GO:0005741: mitochondrial outer membrane	7.11E-03
33	GO:0005794: Golgi apparatus	7.31E-03
34	GO:0016020: membrane	1.18E-02
35	GO:0032580: Golgi cisterna membrane	1.33E-02
36	GO:0005667: transcription factor complex	1.63E-02
37	GO:0005874: microtubule	1.75E-02
38	GO:0031902: late endosome membrane	2.44E-02
39	GO:0005635: nuclear envelope	3.36E-02
40	GO:0010008: endosome membrane	3.68E-02