Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G48680

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway0.00E+00
2GO:0006987: activation of signaling protein activity involved in unfolded protein response0.00E+00
3GO:0048508: embryonic meristem development1.77E-05
4GO:0080136: priming of cellular response to stress1.77E-05
5GO:0034214: protein hexamerization1.77E-05
6GO:0009945: radial axis specification4.61E-05
7GO:0006623: protein targeting to vacuole7.35E-05
8GO:0061158: 3'-UTR-mediated mRNA destabilization8.18E-05
9GO:0048281: inflorescence morphogenesis8.18E-05
10GO:2000114: regulation of establishment of cell polarity1.23E-04
11GO:0006624: vacuolar protein processing1.23E-04
12GO:2001289: lipid X metabolic process1.23E-04
13GO:0072583: clathrin-dependent endocytosis1.23E-04
14GO:2000038: regulation of stomatal complex development1.69E-04
15GO:0030308: negative regulation of cell growth2.19E-04
16GO:0006631: fatty acid metabolic process2.46E-04
17GO:0010358: leaf shaping2.72E-04
18GO:0009920: cell plate formation involved in plant-type cell wall biogenesis2.72E-04
19GO:0009942: longitudinal axis specification3.27E-04
20GO:0048280: vesicle fusion with Golgi apparatus3.27E-04
21GO:2000037: regulation of stomatal complex patterning3.27E-04
22GO:0000911: cytokinesis by cell plate formation3.27E-04
23GO:0046470: phosphatidylcholine metabolic process3.84E-04
24GO:0006614: SRP-dependent cotranslational protein targeting to membrane3.84E-04
25GO:0048367: shoot system development4.39E-04
26GO:0006605: protein targeting4.43E-04
27GO:0009819: drought recovery4.43E-04
28GO:0048766: root hair initiation4.43E-04
29GO:0009738: abscisic acid-activated signaling pathway4.63E-04
30GO:0010120: camalexin biosynthetic process5.05E-04
31GO:0030968: endoplasmic reticulum unfolded protein response5.05E-04
32GO:0008202: steroid metabolic process6.32E-04
33GO:0006896: Golgi to vacuole transport6.99E-04
34GO:0019538: protein metabolic process6.99E-04
35GO:0000266: mitochondrial fission8.38E-04
36GO:0010150: leaf senescence8.60E-04
37GO:0010229: inflorescence development9.08E-04
38GO:0006470: protein dephosphorylation9.76E-04
39GO:0070588: calcium ion transmembrane transport1.06E-03
40GO:0010167: response to nitrate1.06E-03
41GO:0006970: response to osmotic stress1.40E-03
42GO:0010091: trichome branching1.63E-03
43GO:0009409: response to cold1.68E-03
44GO:0016192: vesicle-mediated transport1.68E-03
45GO:0046777: protein autophosphorylation1.71E-03
46GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.72E-03
47GO:0042147: retrograde transport, endosome to Golgi1.72E-03
48GO:0010051: xylem and phloem pattern formation1.81E-03
49GO:0061025: membrane fusion2.00E-03
50GO:0009749: response to glucose2.09E-03
51GO:0010183: pollen tube guidance2.09E-03
52GO:0006891: intra-Golgi vesicle-mediated transport2.19E-03
53GO:0007264: small GTPase mediated signal transduction2.29E-03
54GO:0009751: response to salicylic acid2.31E-03
55GO:0048364: root development2.44E-03
56GO:0006914: autophagy2.49E-03
57GO:0051607: defense response to virus2.70E-03
58GO:0009816: defense response to bacterium, incompatible interaction2.91E-03
59GO:0006888: ER to Golgi vesicle-mediated transport3.13E-03
60GO:0048481: plant ovule development3.36E-03
61GO:0006499: N-terminal protein myristoylation3.59E-03
62GO:0010119: regulation of stomatal movement3.70E-03
63GO:0009611: response to wounding4.20E-03
64GO:0051603: proteolysis involved in cellular protein catabolic process5.89E-03
65GO:0010224: response to UV-B5.89E-03
66GO:0009626: plant-type hypersensitive response6.74E-03
67GO:0042742: defense response to bacterium8.30E-03
68GO:0009845: seed germination9.06E-03
69GO:0009790: embryo development9.56E-03
70GO:0006633: fatty acid biosynthetic process1.01E-02
71GO:0015031: protein transport1.06E-02
72GO:0008380: RNA splicing1.22E-02
73GO:0009617: response to bacterium1.22E-02
74GO:0010468: regulation of gene expression1.22E-02
75GO:0045944: positive regulation of transcription from RNA polymerase II promoter1.39E-02
76GO:0009723: response to ethylene1.62E-02
77GO:0007165: signal transduction1.74E-02
78GO:0010200: response to chitin1.75E-02
79GO:0009737: response to abscisic acid1.78E-02
80GO:0006886: intracellular protein transport1.98E-02
81GO:0006869: lipid transport2.07E-02
82GO:0016042: lipid catabolic process2.20E-02
83GO:0006397: mRNA processing2.32E-02
84GO:0009753: response to jasmonic acid2.36E-02
85GO:0050832: defense response to fungus2.48E-02
86GO:0009873: ethylene-activated signaling pathway2.70E-02
87GO:0009651: response to salt stress2.80E-02
88GO:0009555: pollen development3.39E-02
89GO:0035556: intracellular signal transduction3.52E-02
RankGO TermAdjusted P value
1GO:0019786: Atg8-specific protease activity1.77E-05
2GO:0019779: Atg8 activating enzyme activity4.61E-05
3GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding4.61E-05
4GO:0005047: signal recognition particle binding8.18E-05
5GO:0019776: Atg8 ligase activity1.69E-04
6GO:0016004: phospholipase activator activity1.69E-04
7GO:0005496: steroid binding2.19E-04
8GO:0005546: phosphatidylinositol-4,5-bisphosphate binding2.19E-04
9GO:0102391: decanoate--CoA ligase activity3.27E-04
10GO:0004620: phospholipase activity3.84E-04
11GO:0004467: long-chain fatty acid-CoA ligase activity3.84E-04
12GO:0008142: oxysterol binding5.05E-04
13GO:0004630: phospholipase D activity5.05E-04
14GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity5.05E-04
15GO:0004521: endoribonuclease activity8.38E-04
16GO:0005525: GTP binding8.97E-04
17GO:0005388: calcium-transporting ATPase activity9.08E-04
18GO:0004175: endopeptidase activity9.82E-04
19GO:0043424: protein histidine kinase binding1.29E-03
20GO:0004707: MAP kinase activity1.37E-03
21GO:0005524: ATP binding1.54E-03
22GO:0003727: single-stranded RNA binding1.63E-03
23GO:0030276: clathrin binding1.90E-03
24GO:0004722: protein serine/threonine phosphatase activity2.09E-03
25GO:0004197: cysteine-type endopeptidase activity2.29E-03
26GO:0003924: GTPase activity2.34E-03
27GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity2.60E-03
28GO:0005096: GTPase activator activity3.47E-03
29GO:0000149: SNARE binding4.19E-03
30GO:0005484: SNAP receptor activity4.68E-03
31GO:0005516: calmodulin binding6.17E-03
32GO:0005509: calcium ion binding7.65E-03
33GO:0015144: carbohydrate transmembrane transporter activity9.73E-03
34GO:0005351: sugar:proton symporter activity1.06E-02
35GO:0016301: kinase activity1.08E-02
36GO:0008017: microtubule binding1.11E-02
37GO:0004672: protein kinase activity1.22E-02
38GO:0043531: ADP binding1.56E-02
39GO:0042803: protein homodimerization activity2.00E-02
40GO:0008289: lipid binding2.85E-02
41GO:0016887: ATPase activity3.07E-02
42GO:0046872: metal ion binding3.46E-02
43GO:0004674: protein serine/threonine kinase activity4.10E-02
RankGO TermAdjusted P value
1GO:0005785: signal recognition particle receptor complex0.00E+00
2GO:0045334: clathrin-coated endocytic vesicle1.77E-05
3GO:0042406: extrinsic component of endoplasmic reticulum membrane8.18E-05
4GO:0005775: vacuolar lumen1.23E-04
5GO:0000323: lytic vacuole1.23E-04
6GO:0005794: Golgi apparatus1.54E-04
7GO:0005776: autophagosome1.69E-04
8GO:0000164: protein phosphatase type 1 complex2.19E-04
9GO:0031902: late endosome membrane2.46E-04
10GO:0005773: vacuole3.57E-04
11GO:0012507: ER to Golgi transport vesicle membrane4.43E-04
12GO:0000421: autophagosome membrane4.43E-04
13GO:0005786: signal recognition particle, endoplasmic reticulum targeting5.05E-04
14GO:0005783: endoplasmic reticulum5.85E-04
15GO:0030665: clathrin-coated vesicle membrane6.32E-04
16GO:0017119: Golgi transport complex6.99E-04
17GO:0005802: trans-Golgi network8.68E-04
18GO:0005768: endosome1.01E-03
19GO:0031410: cytoplasmic vesicle1.46E-03
20GO:0005874: microtubule1.55E-03
21GO:0030136: clathrin-coated vesicle1.72E-03
22GO:0009504: cell plate2.09E-03
23GO:0005887: integral component of plasma membrane3.16E-03
24GO:0005886: plasma membrane3.96E-03
25GO:0031201: SNARE complex4.43E-03
26GO:0031966: mitochondrial membrane5.48E-03
27GO:0010008: endosome membrane6.60E-03
28GO:0009506: plasmodesma7.55E-03
29GO:0009524: phragmoplast8.90E-03
30GO:0000139: Golgi membrane1.13E-02
31GO:0005789: endoplasmic reticulum membrane1.27E-02
32GO:0016021: integral component of membrane1.78E-02
33GO:0043231: intracellular membrane-bounded organelle2.41E-02
34GO:0005777: peroxisome3.74E-02
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Gene type



Gene DE type