Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G48050

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006623: protein targeting to vacuole1.53E-07
2GO:0006896: Golgi to vacuole transport2.72E-06
3GO:0071902: positive regulation of protein serine/threonine kinase activity8.12E-06
4GO:0051315: attachment of mitotic spindle microtubules to kinetochore8.12E-06
5GO:0080136: priming of cellular response to stress8.12E-06
6GO:0007093: mitotic cell cycle checkpoint8.12E-06
7GO:1902000: homogentisate catabolic process2.19E-05
8GO:0043631: RNA polyadenylation2.19E-05
9GO:0009660: amyloplast organization2.19E-05
10GO:0010506: regulation of autophagy3.99E-05
11GO:0071230: cellular response to amino acid stimulus3.99E-05
12GO:0007032: endosome organization3.99E-05
13GO:0031929: TOR signaling3.99E-05
14GO:0016050: vesicle organization3.99E-05
15GO:0045836: positive regulation of meiotic nuclear division3.99E-05
16GO:0008333: endosome to lysosome transport3.99E-05
17GO:0006572: tyrosine catabolic process6.14E-05
18GO:2000038: regulation of stomatal complex development8.58E-05
19GO:0042594: response to starvation8.58E-05
20GO:0045723: positive regulation of fatty acid biosynthetic process8.58E-05
21GO:0006897: endocytosis8.92E-05
22GO:0007094: mitotic spindle assembly checkpoint1.12E-04
23GO:0045927: positive regulation of growth1.12E-04
24GO:0006777: Mo-molybdopterin cofactor biosynthetic process1.41E-04
25GO:0009959: negative gravitropism1.41E-04
26GO:0009267: cellular response to starvation1.41E-04
27GO:0006559: L-phenylalanine catabolic process1.41E-04
28GO:0051301: cell division1.50E-04
29GO:2000037: regulation of stomatal complex patterning1.71E-04
30GO:0030307: positive regulation of cell growth2.04E-04
31GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway2.04E-04
32GO:0010120: camalexin biosynthetic process2.71E-04
33GO:0006972: hyperosmotic response2.71E-04
34GO:0006378: mRNA polyadenylation4.19E-04
35GO:0008361: regulation of cell size4.58E-04
36GO:0010229: inflorescence development4.98E-04
37GO:0007034: vacuolar transport5.39E-04
38GO:0007033: vacuole organization5.80E-04
39GO:0042023: DNA endoreduplication6.22E-04
40GO:0051321: meiotic cell cycle7.53E-04
41GO:0010091: trichome branching8.91E-04
42GO:0048364: root development9.77E-04
43GO:0009958: positive gravitropism1.03E-03
44GO:0010183: pollen tube guidance1.13E-03
45GO:0000302: response to reactive oxygen species1.18E-03
46GO:0010252: auxin homeostasis1.34E-03
47GO:0016049: cell growth1.73E-03
48GO:0048481: plant ovule development1.79E-03
49GO:0042542: response to hydrogen peroxide2.42E-03
50GO:0010224: response to UV-B3.11E-03
51GO:0009626: plant-type hypersensitive response3.56E-03
52GO:0009620: response to fungus3.63E-03
53GO:0010150: leaf senescence5.61E-03
54GO:0006470: protein dephosphorylation6.15E-03
55GO:0010468: regulation of gene expression6.34E-03
56GO:0009793: embryo development ending in seed dormancy7.44E-03
57GO:0006970: response to osmotic stress8.00E-03
58GO:0009723: response to ethylene8.41E-03
59GO:0016567: protein ubiquitination9.79E-03
60GO:0009651: response to salt stress1.08E-02
61GO:0009751: response to salicylic acid1.15E-02
62GO:0009555: pollen development1.74E-02
63GO:0035556: intracellular signal transduction1.81E-02
64GO:0006457: protein folding2.09E-02
65GO:0006468: protein phosphorylation2.50E-02
66GO:0042742: defense response to bacterium2.88E-02
67GO:0006979: response to oxidative stress2.90E-02
68GO:0009409: response to cold3.58E-02
69GO:0007165: signal transduction4.86E-02
70GO:0009737: response to abscisic acid4.94E-02
RankGO TermAdjusted P value
1GO:0004411: homogentisate 1,2-dioxygenase activity0.00E+00
2GO:0009940: amino-terminal vacuolar sorting propeptide binding0.00E+00
3GO:0061799: cyclic pyranopterin monophosphate synthase activity0.00E+00
4GO:0010209: vacuolar sorting signal binding8.12E-06
5GO:0004652: polynucleotide adenylyltransferase activity6.14E-05
6GO:0030674: protein binding, bridging2.37E-04
7GO:0008138: protein tyrosine/serine/threonine phosphatase activity3.07E-04
8GO:0031490: chromatin DNA binding3.43E-04
9GO:0004672: protein kinase activity5.63E-04
10GO:0004725: protein tyrosine phosphatase activity6.22E-04
11GO:0004707: MAP kinase activity7.53E-04
12GO:0016779: nucleotidyltransferase activity7.99E-04
13GO:0003713: transcription coactivator activity1.03E-03
14GO:0004712: protein serine/threonine/tyrosine kinase activity2.23E-03
15GO:0035091: phosphatidylinositol binding2.62E-03
16GO:0005515: protein binding3.55E-03
17GO:0016874: ligase activity3.71E-03
18GO:0004842: ubiquitin-protein transferase activity4.45E-03
19GO:0000166: nucleotide binding1.74E-02
20GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.12E-02
21GO:0003723: RNA binding2.53E-02
22GO:0005509: calcium ion binding2.72E-02
23GO:0005524: ATP binding2.75E-02
24GO:0003824: catalytic activity3.08E-02
RankGO TermAdjusted P value
1GO:0005770: late endosome2.03E-05
2GO:0031931: TORC1 complex3.99E-05
3GO:0031902: late endosome membrane8.92E-05
4GO:0031011: Ino80 complex1.12E-04
5GO:0000776: kinetochore1.12E-04
6GO:0072686: mitotic spindle1.12E-04
7GO:0005771: multivesicular body1.41E-04
8GO:0030904: retromer complex1.41E-04
9GO:0005802: trans-Golgi network2.54E-04
10GO:0030665: clathrin-coated vesicle membrane3.43E-04
11GO:0017119: Golgi transport complex3.81E-04
12GO:0009574: preprophase band4.98E-04
13GO:0043231: intracellular membrane-bounded organelle1.03E-03
14GO:0019898: extrinsic component of membrane1.13E-03
15GO:0000151: ubiquitin ligase complex1.79E-03
16GO:0005635: nuclear envelope3.18E-03
17GO:0005623: cell4.58E-03
18GO:0009524: phragmoplast4.67E-03
19GO:0005759: mitochondrial matrix5.26E-03
20GO:0005634: nucleus6.91E-03
21GO:0080008: Cul4-RING E3 ubiquitin ligase complex8.10E-03
22GO:0005794: Golgi apparatus1.30E-02
23GO:0005887: integral component of plasma membrane1.44E-02
24GO:0005783: endoplasmic reticulum2.26E-02
25GO:0005622: intracellular2.62E-02
26GO:0005768: endosome2.67E-02
27GO:0000139: Golgi membrane3.58E-02
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Gene type



Gene DE type