Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G47560

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0034337: RNA folding0.00E+00
2GO:0018023: peptidyl-lysine trimethylation0.00E+00
3GO:0006429: leucyl-tRNA aminoacylation0.00E+00
4GO:0006223: uracil salvage0.00E+00
5GO:0016553: base conversion or substitution editing0.00E+00
6GO:0010275: NAD(P)H dehydrogenase complex assembly0.00E+00
7GO:0060416: response to growth hormone0.00E+00
8GO:0002184: cytoplasmic translational termination0.00E+00
9GO:0042820: vitamin B6 catabolic process0.00E+00
10GO:0099131: ATP hydrolysis coupled ion transmembrane transport0.00E+00
11GO:1901918: negative regulation of exoribonuclease activity0.00E+00
12GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
13GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
14GO:0033494: ferulate metabolic process0.00E+00
15GO:0042371: vitamin K biosynthetic process0.00E+00
16GO:2000121: regulation of removal of superoxide radicals0.00E+00
17GO:0061635: regulation of protein complex stability0.00E+00
18GO:0006399: tRNA metabolic process0.00E+00
19GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
20GO:0006642: triglyceride mobilization0.00E+00
21GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
22GO:0042821: pyridoxal biosynthetic process0.00E+00
23GO:0005996: monosaccharide metabolic process0.00E+00
24GO:0018160: peptidyl-pyrromethane cofactor linkage0.00E+00
25GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
26GO:0097164: ammonium ion metabolic process0.00E+00
27GO:1902458: positive regulation of stomatal opening0.00E+00
28GO:0070125: mitochondrial translational elongation0.00E+00
29GO:0032544: plastid translation7.69E-18
30GO:0015995: chlorophyll biosynthetic process9.07E-17
31GO:0015979: photosynthesis3.36E-14
32GO:0006412: translation5.36E-13
33GO:0009658: chloroplast organization2.23E-12
34GO:0010207: photosystem II assembly3.01E-12
35GO:0009735: response to cytokinin2.30E-09
36GO:0010027: thylakoid membrane organization1.42E-08
37GO:0042254: ribosome biogenesis2.84E-08
38GO:0006782: protoporphyrinogen IX biosynthetic process4.15E-08
39GO:0090391: granum assembly1.38E-06
40GO:0009773: photosynthetic electron transport in photosystem I2.65E-06
41GO:0019253: reductive pentose-phosphate cycle7.99E-06
42GO:0032502: developmental process1.96E-05
43GO:0010206: photosystem II repair2.17E-05
44GO:0006783: heme biosynthetic process2.17E-05
45GO:0006779: porphyrin-containing compound biosynthetic process3.15E-05
46GO:0032543: mitochondrial translation3.49E-05
47GO:0045038: protein import into chloroplast thylakoid membrane3.49E-05
48GO:0055114: oxidation-reduction process4.35E-05
49GO:1903426: regulation of reactive oxygen species biosynthetic process5.64E-05
50GO:1902326: positive regulation of chlorophyll biosynthetic process5.64E-05
51GO:0009409: response to cold9.84E-05
52GO:1901259: chloroplast rRNA processing9.94E-05
53GO:0042742: defense response to bacterium1.95E-04
54GO:0042255: ribosome assembly2.07E-04
55GO:0006633: fatty acid biosynthetic process2.12E-04
56GO:0006546: glycine catabolic process5.46E-04
57GO:0000413: protein peptidyl-prolyl isomerization6.44E-04
58GO:0018119: peptidyl-cysteine S-nitrosylation6.79E-04
59GO:0045037: protein import into chloroplast stroma8.13E-04
60GO:0009767: photosynthetic electron transport chain9.59E-04
61GO:0006006: glucose metabolic process9.59E-04
62GO:0009793: embryo development ending in seed dormancy1.02E-03
63GO:0042549: photosystem II stabilization1.10E-03
64GO:0006655: phosphatidylglycerol biosynthetic process1.10E-03
65GO:0010190: cytochrome b6f complex assembly1.10E-03
66GO:0000476: maturation of 4.5S rRNA1.20E-03
67GO:0009443: pyridoxal 5'-phosphate salvage1.20E-03
68GO:2000905: negative regulation of starch metabolic process1.20E-03
69GO:0000967: rRNA 5'-end processing1.20E-03
70GO:0046166: glyceraldehyde-3-phosphate biosynthetic process1.20E-03
71GO:0071588: hydrogen peroxide mediated signaling pathway1.20E-03
72GO:0010729: positive regulation of hydrogen peroxide biosynthetic process1.20E-03
73GO:0006434: seryl-tRNA aminoacylation1.20E-03
74GO:0043489: RNA stabilization1.20E-03
75GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process1.20E-03
76GO:1904966: positive regulation of vitamin E biosynthetic process1.20E-03
77GO:0000481: maturation of 5S rRNA1.20E-03
78GO:1904964: positive regulation of phytol biosynthetic process1.20E-03
79GO:0006438: valyl-tRNA aminoacylation1.20E-03
80GO:0043007: maintenance of rDNA1.20E-03
81GO:0051247: positive regulation of protein metabolic process1.20E-03
82GO:0046520: sphingoid biosynthetic process1.20E-03
83GO:0042372: phylloquinone biosynthetic process1.46E-03
84GO:0010019: chloroplast-nucleus signaling pathway1.46E-03
85GO:0006636: unsaturated fatty acid biosynthetic process1.50E-03
86GO:0006821: chloride transport1.88E-03
87GO:0009772: photosynthetic electron transport in photosystem II1.88E-03
88GO:0010196: nonphotochemical quenching1.88E-03
89GO:0006418: tRNA aminoacylation for protein translation1.96E-03
90GO:0042128: nitrate assimilation2.12E-03
91GO:0045454: cell redox homeostasis2.17E-03
92GO:0006353: DNA-templated transcription, termination2.35E-03
93GO:0048564: photosystem I assembly2.35E-03
94GO:2000070: regulation of response to water deprivation2.35E-03
95GO:0006729: tetrahydrobiopterin biosynthetic process2.64E-03
96GO:0034755: iron ion transmembrane transport2.64E-03
97GO:0006568: tryptophan metabolic process2.64E-03
98GO:0030388: fructose 1,6-bisphosphate metabolic process2.64E-03
99GO:0034470: ncRNA processing2.64E-03
100GO:0043039: tRNA aminoacylation2.64E-03
101GO:0070981: L-asparagine biosynthetic process2.64E-03
102GO:0018026: peptidyl-lysine monomethylation2.64E-03
103GO:1904143: positive regulation of carotenoid biosynthetic process2.64E-03
104GO:0080148: negative regulation of response to water deprivation2.64E-03
105GO:0080183: response to photooxidative stress2.64E-03
106GO:0006529: asparagine biosynthetic process2.64E-03
107GO:0018298: protein-chromophore linkage2.70E-03
108GO:0071482: cellular response to light stimulus2.88E-03
109GO:0009657: plastid organization2.88E-03
110GO:0006096: glycolytic process3.10E-03
111GO:0009306: protein secretion3.11E-03
112GO:0016117: carotenoid biosynthetic process3.46E-03
113GO:0042335: cuticle development3.83E-03
114GO:0010205: photoinhibition4.12E-03
115GO:0032504: multicellular organism reproduction4.40E-03
116GO:0015714: phosphoenolpyruvate transport4.40E-03
117GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition4.40E-03
118GO:0048586: regulation of long-day photoperiodism, flowering4.40E-03
119GO:0006011: UDP-glucose metabolic process4.40E-03
120GO:0006954: inflammatory response4.40E-03
121GO:0019563: glycerol catabolic process4.40E-03
122GO:0006518: peptide metabolic process4.40E-03
123GO:0051604: protein maturation4.40E-03
124GO:0006000: fructose metabolic process4.40E-03
125GO:0045493: xylan catabolic process4.40E-03
126GO:0005977: glycogen metabolic process4.40E-03
127GO:0019684: photosynthesis, light reaction5.60E-03
128GO:0006352: DNA-templated transcription, initiation5.60E-03
129GO:1902476: chloride transmembrane transport6.44E-03
130GO:0051513: regulation of monopolar cell growth6.44E-03
131GO:0009052: pentose-phosphate shunt, non-oxidative branch6.44E-03
132GO:0016556: mRNA modification6.44E-03
133GO:0071484: cellular response to light intensity6.44E-03
134GO:0010731: protein glutathionylation6.44E-03
135GO:0006424: glutamyl-tRNA aminoacylation6.44E-03
136GO:0009152: purine ribonucleotide biosynthetic process6.44E-03
137GO:0046653: tetrahydrofolate metabolic process6.44E-03
138GO:0006241: CTP biosynthetic process6.44E-03
139GO:0080170: hydrogen peroxide transmembrane transport6.44E-03
140GO:0055070: copper ion homeostasis6.44E-03
141GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis6.44E-03
142GO:2001141: regulation of RNA biosynthetic process6.44E-03
143GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity6.44E-03
144GO:0006165: nucleoside diphosphate phosphorylation6.44E-03
145GO:0016024: CDP-diacylglycerol biosynthetic process6.44E-03
146GO:0006228: UTP biosynthetic process6.44E-03
147GO:0006094: gluconeogenesis7.35E-03
148GO:0009790: embryo development8.46E-03
149GO:0015713: phosphoglycerate transport8.74E-03
150GO:0044206: UMP salvage8.74E-03
151GO:0015976: carbon utilization8.74E-03
152GO:0006749: glutathione metabolic process8.74E-03
153GO:2000122: negative regulation of stomatal complex development8.74E-03
154GO:0030104: water homeostasis8.74E-03
155GO:0019464: glycine decarboxylation via glycine cleavage system8.74E-03
156GO:0006021: inositol biosynthetic process8.74E-03
157GO:0009765: photosynthesis, light harvesting8.74E-03
158GO:2000306: positive regulation of photomorphogenesis8.74E-03
159GO:0006183: GTP biosynthetic process8.74E-03
160GO:0045727: positive regulation of translation8.74E-03
161GO:0071483: cellular response to blue light8.74E-03
162GO:0015994: chlorophyll metabolic process8.74E-03
163GO:0010037: response to carbon dioxide8.74E-03
164GO:0006808: regulation of nitrogen utilization8.74E-03
165GO:0010167: response to nitrate9.35E-03
166GO:0006457: protein folding1.07E-02
167GO:0043097: pyrimidine nucleoside salvage1.13E-02
168GO:0016123: xanthophyll biosynthetic process1.13E-02
169GO:0006564: L-serine biosynthetic process1.13E-02
170GO:0009247: glycolipid biosynthetic process1.13E-02
171GO:0010236: plastoquinone biosynthetic process1.13E-02
172GO:0034052: positive regulation of plant-type hypersensitive response1.13E-02
173GO:0031365: N-terminal protein amino acid modification1.13E-02
174GO:0035434: copper ion transmembrane transport1.13E-02
175GO:0016120: carotene biosynthetic process1.13E-02
176GO:0019344: cysteine biosynthetic process1.16E-02
177GO:0009768: photosynthesis, light harvesting in photosystem I1.29E-02
178GO:0018258: protein O-linked glycosylation via hydroxyproline1.41E-02
179GO:0046855: inositol phosphate dephosphorylation1.41E-02
180GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1.41E-02
181GO:0009117: nucleotide metabolic process1.41E-02
182GO:0016554: cytidine to uridine editing1.41E-02
183GO:0010942: positive regulation of cell death1.41E-02
184GO:0010405: arabinogalactan protein metabolic process1.41E-02
185GO:0006206: pyrimidine nucleobase metabolic process1.41E-02
186GO:0032973: amino acid export1.41E-02
187GO:0061077: chaperone-mediated protein folding1.42E-02
188GO:0009407: toxin catabolic process1.43E-02
189GO:0008380: RNA splicing1.55E-02
190GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity1.71E-02
191GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.71E-02
192GO:0006458: 'de novo' protein folding1.71E-02
193GO:0009955: adaxial/abaxial pattern specification1.71E-02
194GO:0009854: oxidative photosynthetic carbon pathway1.71E-02
195GO:0042026: protein refolding1.71E-02
196GO:0010555: response to mannitol1.71E-02
197GO:0034599: cellular response to oxidative stress1.81E-02
198GO:0006810: transport1.94E-02
199GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.01E-02
200GO:0030001: metal ion transport2.02E-02
201GO:0009610: response to symbiotic fungus2.03E-02
202GO:0050829: defense response to Gram-negative bacterium2.03E-02
203GO:0009395: phospholipid catabolic process2.03E-02
204GO:0043090: amino acid import2.03E-02
205GO:0009645: response to low light intensity stimulus2.03E-02
206GO:0010444: guard mother cell differentiation2.03E-02
207GO:0006400: tRNA modification2.03E-02
208GO:0006614: SRP-dependent cotranslational protein targeting to membrane2.03E-02
209GO:0042631: cellular response to water deprivation2.18E-02
210GO:0080022: primary root development2.18E-02
211GO:0009741: response to brassinosteroid2.35E-02
212GO:0052543: callose deposition in cell wall2.37E-02
213GO:0006875: cellular metal ion homeostasis2.37E-02
214GO:0043068: positive regulation of programmed cell death2.37E-02
215GO:0009690: cytokinin metabolic process2.37E-02
216GO:0006605: protein targeting2.37E-02
217GO:0019375: galactolipid biosynthetic process2.37E-02
218GO:0010078: maintenance of root meristem identity2.37E-02
219GO:0009704: de-etiolation2.37E-02
220GO:0032508: DNA duplex unwinding2.37E-02
221GO:0010114: response to red light2.37E-02
222GO:0009819: drought recovery2.37E-02
223GO:0009642: response to light intensity2.37E-02
224GO:0009646: response to absence of light2.53E-02
225GO:0042744: hydrogen peroxide catabolic process2.68E-02
226GO:0009932: cell tip growth2.73E-02
227GO:0006002: fructose 6-phosphate metabolic process2.73E-02
228GO:0022900: electron transport chain2.73E-02
229GO:0015996: chlorophyll catabolic process2.73E-02
230GO:0007186: G-protein coupled receptor signaling pathway2.73E-02
231GO:0043562: cellular response to nitrogen levels2.73E-02
232GO:0017004: cytochrome complex assembly2.73E-02
233GO:0009636: response to toxic substance2.74E-02
234GO:0000302: response to reactive oxygen species2.90E-02
235GO:0009821: alkaloid biosynthetic process3.11E-02
236GO:0080144: amino acid homeostasis3.11E-02
237GO:0009051: pentose-phosphate shunt, oxidative branch3.11E-02
238GO:0009245: lipid A biosynthetic process3.11E-02
239GO:0000373: Group II intron splicing3.11E-02
240GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process3.50E-02
241GO:1900865: chloroplast RNA modification3.50E-02
242GO:0007623: circadian rhythm3.55E-02
243GO:0009870: defense response signaling pathway, resistance gene-dependent3.91E-02
244GO:0006535: cysteine biosynthetic process from serine3.91E-02
245GO:0043069: negative regulation of programmed cell death3.91E-02
246GO:0006415: translational termination4.34E-02
247GO:0009684: indoleacetic acid biosynthetic process4.34E-02
248GO:0009089: lysine biosynthetic process via diaminopimelate4.34E-02
249GO:0009073: aromatic amino acid family biosynthetic process4.34E-02
250GO:0043085: positive regulation of catalytic activity4.34E-02
251GO:0000038: very long-chain fatty acid metabolic process4.34E-02
252GO:0006879: cellular iron ion homeostasis4.34E-02
253GO:0000272: polysaccharide catabolic process4.34E-02
254GO:0009698: phenylpropanoid metabolic process4.34E-02
255GO:0046686: response to cadmium ion4.49E-02
256GO:0009627: systemic acquired resistance4.69E-02
257GO:0015706: nitrate transport4.78E-02
258GO:0006790: sulfur compound metabolic process4.78E-02
259GO:0010411: xyloglucan metabolic process4.94E-02
RankGO TermAdjusted P value
1GO:0004853: uroporphyrinogen decarboxylase activity0.00E+00
2GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
3GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
4GO:0005048: signal sequence binding0.00E+00
5GO:0047889: ferredoxin-nitrate reductase activity0.00E+00
6GO:0008887: glycerate kinase activity0.00E+00
7GO:0048307: ferredoxin-nitrite reductase activity0.00E+00
8GO:0009974: zeinoxanthin epsilon hydroxylase activity0.00E+00
9GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
10GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
11GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
12GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
13GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
14GO:0050421: nitrite reductase (NO-forming) activity0.00E+00
15GO:0047513: 1,2-alpha-L-fucosidase activity0.00E+00
16GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity0.00E+00
17GO:0004418: hydroxymethylbilane synthase activity0.00E+00
18GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
19GO:0004823: leucine-tRNA ligase activity0.00E+00
20GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
21GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
22GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
23GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity0.00E+00
24GO:0015038: glutathione disulfide oxidoreductase activity0.00E+00
25GO:0046408: chlorophyll synthetase activity0.00E+00
26GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
27GO:0000979: RNA polymerase II core promoter sequence-specific DNA binding0.00E+00
28GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
29GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
30GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
31GO:0045435: lycopene epsilon cyclase activity0.00E+00
32GO:0004822: isoleucine-tRNA ligase activity0.00E+00
33GO:0019843: rRNA binding7.60E-31
34GO:0003735: structural constituent of ribosome1.60E-15
35GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.88E-11
36GO:0016851: magnesium chelatase activity2.57E-08
37GO:0005528: FK506 binding3.18E-08
38GO:0051920: peroxiredoxin activity2.70E-06
39GO:0016209: antioxidant activity8.84E-06
40GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity5.64E-05
41GO:0031072: heat shock protein binding1.01E-04
42GO:0002161: aminoacyl-tRNA editing activity1.70E-04
43GO:0051537: 2 iron, 2 sulfur cluster binding3.50E-04
44GO:0003727: single-stranded RNA binding5.00E-04
45GO:0004045: aminoacyl-tRNA hydrolase activity5.46E-04
46GO:0016987: sigma factor activity5.46E-04
47GO:0001053: plastid sigma factor activity5.46E-04
48GO:0004601: peroxidase activity8.34E-04
49GO:0004130: cytochrome-c peroxidase activity1.10E-03
50GO:0005247: voltage-gated chloride channel activity1.10E-03
51GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity1.20E-03
52GO:0045485: omega-6 fatty acid desaturase activity1.20E-03
53GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity1.20E-03
54GO:0000170: sphingosine hydroxylase activity1.20E-03
55GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity1.20E-03
56GO:0009374: biotin binding1.20E-03
57GO:0030794: (S)-coclaurine-N-methyltransferase activity1.20E-03
58GO:0004425: indole-3-glycerol-phosphate synthase activity1.20E-03
59GO:0004560: alpha-L-fucosidase activity1.20E-03
60GO:0004807: triose-phosphate isomerase activity1.20E-03
61GO:0015088: copper uptake transmembrane transporter activity1.20E-03
62GO:0004832: valine-tRNA ligase activity1.20E-03
63GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity1.20E-03
64GO:0004828: serine-tRNA ligase activity1.20E-03
65GO:0080132: fatty acid alpha-hydroxylase activity1.20E-03
66GO:0004328: formamidase activity1.20E-03
67GO:0015121: phosphoenolpyruvate:phosphate antiporter activity1.20E-03
68GO:0004655: porphobilinogen synthase activity1.20E-03
69GO:0004071: aspartate-ammonia ligase activity1.20E-03
70GO:0010347: L-galactose-1-phosphate phosphatase activity1.20E-03
71GO:0009671: nitrate:proton symporter activity1.20E-03
72GO:0016491: oxidoreductase activity1.34E-03
73GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity1.46E-03
74GO:0016168: chlorophyll binding1.95E-03
75GO:0004033: aldo-keto reductase (NADP) activity2.35E-03
76GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity2.64E-03
77GO:0009977: proton motive force dependent protein transmembrane transporter activity2.64E-03
78GO:0004617: phosphoglycerate dehydrogenase activity2.64E-03
79GO:0008967: phosphoglycolate phosphatase activity2.64E-03
80GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity2.64E-03
81GO:0080097: L-tryptophan:pyruvate aminotransferase activity2.64E-03
82GO:0016630: protochlorophyllide reductase activity2.64E-03
83GO:0004047: aminomethyltransferase activity2.64E-03
84GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity2.64E-03
85GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity2.64E-03
86GO:0052832: inositol monophosphate 3-phosphatase activity2.64E-03
87GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase2.64E-03
88GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity2.64E-03
89GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity2.64E-03
90GO:0042284: sphingolipid delta-4 desaturase activity2.64E-03
91GO:0008934: inositol monophosphate 1-phosphatase activity2.64E-03
92GO:0047746: chlorophyllase activity2.64E-03
93GO:0042389: omega-3 fatty acid desaturase activity2.64E-03
94GO:0052833: inositol monophosphate 4-phosphatase activity2.64E-03
95GO:0004618: phosphoglycerate kinase activity2.64E-03
96GO:0010297: heteropolysaccharide binding2.64E-03
97GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water2.88E-03
98GO:0004812: aminoacyl-tRNA ligase activity3.46E-03
99GO:0005381: iron ion transmembrane transporter activity4.12E-03
100GO:0051082: unfolded protein binding4.32E-03
101GO:0010277: chlorophyllide a oxygenase [overall] activity4.40E-03
102GO:0016531: copper chaperone activity4.40E-03
103GO:0070330: aromatase activity4.40E-03
104GO:0004751: ribose-5-phosphate isomerase activity4.40E-03
105GO:0045174: glutathione dehydrogenase (ascorbate) activity4.40E-03
106GO:0030267: glyoxylate reductase (NADP) activity4.40E-03
107GO:0019829: cation-transporting ATPase activity4.40E-03
108GO:0017150: tRNA dihydrouridine synthase activity4.40E-03
109GO:0050734: hydroxycinnamoyltransferase activity4.40E-03
110GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity4.40E-03
111GO:0016742: hydroxymethyl-, formyl- and related transferase activity4.40E-03
112GO:0070402: NADPH binding4.40E-03
113GO:0004148: dihydrolipoyl dehydrogenase activity4.40E-03
114GO:0008864: formyltetrahydrofolate deformylase activity4.40E-03
115GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor4.40E-03
116GO:0004364: glutathione transferase activity5.44E-03
117GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity6.44E-03
118GO:0035529: NADH pyrophosphatase activity6.44E-03
119GO:0035250: UDP-galactosyltransferase activity6.44E-03
120GO:0016149: translation release factor activity, codon specific6.44E-03
121GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity6.44E-03
122GO:0004375: glycine dehydrogenase (decarboxylating) activity6.44E-03
123GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides6.44E-03
124GO:0004550: nucleoside diphosphate kinase activity6.44E-03
125GO:0043023: ribosomal large subunit binding6.44E-03
126GO:0008097: 5S rRNA binding6.44E-03
127GO:0016722: oxidoreductase activity, oxidizing metal ions7.71E-03
128GO:0008266: poly(U) RNA binding8.31E-03
129GO:0016788: hydrolase activity, acting on ester bonds8.47E-03
130GO:0004845: uracil phosphoribosyltransferase activity8.74E-03
131GO:0004345: glucose-6-phosphate dehydrogenase activity8.74E-03
132GO:0016836: hydro-lyase activity8.74E-03
133GO:0009044: xylan 1,4-beta-xylosidase activity8.74E-03
134GO:0005253: anion channel activity8.74E-03
135GO:1990137: plant seed peroxidase activity8.74E-03
136GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity8.74E-03
137GO:0046556: alpha-L-arabinofuranosidase activity8.74E-03
138GO:0015120: phosphoglycerate transmembrane transporter activity8.74E-03
139GO:0004659: prenyltransferase activity8.74E-03
140GO:0016279: protein-lysine N-methyltransferase activity8.74E-03
141GO:0043495: protein anchor8.74E-03
142GO:0003690: double-stranded DNA binding9.67E-03
143GO:0031409: pigment binding1.05E-02
144GO:0004040: amidase activity1.13E-02
145GO:0003959: NADPH dehydrogenase activity1.13E-02
146GO:0008725: DNA-3-methyladenine glycosylase activity1.13E-02
147GO:0030414: peptidase inhibitor activity1.13E-02
148GO:0018685: alkane 1-monooxygenase activity1.13E-02
149GO:0016846: carbon-sulfur lyase activity1.13E-02
150GO:0016773: phosphotransferase activity, alcohol group as acceptor1.13E-02
151GO:0003989: acetyl-CoA carboxylase activity1.13E-02
152GO:0009055: electron carrier activity1.15E-02
153GO:0008236: serine-type peptidase activity1.18E-02
154GO:0042578: phosphoric ester hydrolase activity1.41E-02
155GO:0004605: phosphatidate cytidylyltransferase activity1.41E-02
156GO:0080030: methyl indole-3-acetate esterase activity1.41E-02
157GO:1990714: hydroxyproline O-galactosyltransferase activity1.41E-02
158GO:0031177: phosphopantetheine binding1.41E-02
159GO:0016208: AMP binding1.41E-02
160GO:0016462: pyrophosphatase activity1.41E-02
161GO:0016688: L-ascorbate peroxidase activity1.41E-02
162GO:0008200: ion channel inhibitor activity1.41E-02
163GO:0004222: metalloendopeptidase activity1.43E-02
164GO:0022891: substrate-specific transmembrane transporter activity1.70E-02
165GO:0051753: mannan synthase activity1.71E-02
166GO:0004124: cysteine synthase activity1.71E-02
167GO:0004849: uridine kinase activity1.71E-02
168GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity1.71E-02
169GO:0000035: acyl binding1.71E-02
170GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity1.71E-02
171GO:0003723: RNA binding1.80E-02
172GO:0003993: acid phosphatase activity1.81E-02
173GO:0003756: protein disulfide isomerase activity1.85E-02
174GO:0050661: NADP binding2.02E-02
175GO:0019899: enzyme binding2.03E-02
176GO:0008235: metalloexopeptidase activity2.03E-02
177GO:0043295: glutathione binding2.03E-02
178GO:0008312: 7S RNA binding2.37E-02
179GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process2.37E-02
180GO:0004034: aldose 1-epimerase activity2.37E-02
181GO:0005509: calcium ion binding2.61E-02
182GO:0005375: copper ion transmembrane transporter activity2.73E-02
183GO:0051287: NAD binding3.01E-02
184GO:0003747: translation release factor activity3.11E-02
185GO:0000156: phosphorelay response regulator activity3.31E-02
186GO:0016844: strictosidine synthase activity3.50E-02
187GO:0015112: nitrate transmembrane transporter activity3.50E-02
188GO:0008237: metallopeptidase activity3.74E-02
189GO:0008483: transaminase activity3.74E-02
190GO:0008047: enzyme activator activity3.91E-02
191GO:0004805: trehalose-phosphatase activity3.91E-02
192GO:0004864: protein phosphatase inhibitor activity3.91E-02
193GO:0016597: amino acid binding3.97E-02
194GO:0008794: arsenate reductase (glutaredoxin) activity4.34E-02
195GO:0044183: protein binding involved in protein folding4.34E-02
196GO:0004177: aminopeptidase activity4.34E-02
197GO:0008378: galactosyltransferase activity4.78E-02
198GO:0000049: tRNA binding4.78E-02
199GO:0102483: scopolin beta-glucosidase activity4.94E-02
RankGO TermAdjusted P value
1GO:0044391: ribosomal subunit0.00E+00
2GO:0009571: proplastid stroma0.00E+00
3GO:0009515: granal stacked thylakoid0.00E+00
4GO:0005835: fatty acid synthase complex0.00E+00
5GO:0009344: nitrite reductase complex [NAD(P)H]0.00E+00
6GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex0.00E+00
7GO:0009575: chromoplast stroma0.00E+00
8GO:0005943: phosphatidylinositol 3-kinase complex, class IA0.00E+00
9GO:0009507: chloroplast1.02E-162
10GO:0009570: chloroplast stroma7.43E-93
11GO:0009941: chloroplast envelope1.45E-79
12GO:0009535: chloroplast thylakoid membrane8.50E-76
13GO:0009579: thylakoid4.68E-47
14GO:0009534: chloroplast thylakoid2.86E-44
15GO:0009543: chloroplast thylakoid lumen1.32E-35
16GO:0031977: thylakoid lumen2.58E-19
17GO:0005840: ribosome6.63E-17
18GO:0031969: chloroplast membrane1.39E-11
19GO:0009654: photosystem II oxygen evolving complex3.46E-11
20GO:0009706: chloroplast inner membrane6.64E-09
21GO:0030095: chloroplast photosystem II8.01E-09
22GO:0019898: extrinsic component of membrane4.06E-08
23GO:0009536: plastid5.17E-08
24GO:0048046: apoplast5.24E-08
25GO:0000311: plastid large ribosomal subunit1.20E-07
26GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)6.30E-07
27GO:0010007: magnesium chelatase complex1.38E-06
28GO:0010319: stromule2.71E-06
29GO:0009295: nucleoid3.34E-05
30GO:0009508: plastid chromosome1.01E-04
31GO:0009533: chloroplast stromal thylakoid1.47E-04
32GO:0033281: TAT protein transport complex1.70E-04
33GO:0042651: thylakoid membrane2.77E-04
34GO:0010287: plastoglobule4.26E-04
35GO:0016020: membrane6.15E-04
36GO:0015934: large ribosomal subunit7.26E-04
37GO:0009523: photosystem II9.06E-04
38GO:0034707: chloride channel complex1.10E-03
39GO:0000312: plastid small ribosomal subunit1.12E-03
40GO:0009782: photosystem I antenna complex1.20E-03
41GO:0043674: columella1.20E-03
42GO:0009547: plastid ribosome1.20E-03
43GO:0030529: intracellular ribonucleoprotein complex1.78E-03
44GO:0015935: small ribosomal subunit2.21E-03
45GO:0009505: plant-type cell wall2.57E-03
46GO:0000427: plastid-encoded plastid RNA polymerase complex2.64E-03
47GO:0042170: plastid membrane2.64E-03
48GO:0080085: signal recognition particle, chloroplast targeting2.64E-03
49GO:0009317: acetyl-CoA carboxylase complex4.40E-03
50GO:0009528: plastid inner membrane4.40E-03
51GO:0009509: chromoplast4.40E-03
52GO:0046658: anchored component of plasma membrane6.00E-03
53GO:0005960: glycine cleavage complex6.44E-03
54GO:0032040: small-subunit processome6.44E-03
55GO:0042646: plastid nucleoid6.44E-03
56GO:0009527: plastid outer membrane8.74E-03
57GO:0031897: Tic complex8.74E-03
58GO:0009526: plastid envelope8.74E-03
59GO:0030076: light-harvesting complex9.35E-03
60GO:0055035: plastid thylakoid membrane1.13E-02
61GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)1.41E-02
62GO:0009532: plastid stroma1.42E-02
63GO:0005762: mitochondrial large ribosomal subunit1.71E-02
64GO:0016363: nuclear matrix1.71E-02
65GO:0042807: central vacuole2.03E-02
66GO:0009538: photosystem I reaction center2.37E-02
67GO:0009522: photosystem I2.53E-02
68GO:0009539: photosystem II reaction center2.73E-02
69GO:0005786: signal recognition particle, endoplasmic reticulum targeting2.73E-02
70GO:0005811: lipid particle2.73E-02
71GO:0022626: cytosolic ribosome3.01E-02
72GO:0005763: mitochondrial small ribosomal subunit3.11E-02
73GO:0031225: anchored component of membrane3.74E-02
74GO:0005618: cell wall4.77E-02
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Gene type



Gene DE type