co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G47000

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009661: chromoplast organization	0.00E+00
2	GO:0016120: carotene biosynthetic process	1.42E-07
3	GO:0042939: tripeptide transport	1.65E-05
4	GO:1904143: positive regulation of carotenoid biosynthetic process	1.65E-05
5	GO:2001295: malonyl-CoA biosynthetic process	3.04E-05
6	GO:0042938: dipeptide transport	6.61E-05
7	GO:0030497: fatty acid elongation	1.60E-04
8	GO:0050821: protein stabilization	1.86E-04
9	GO:0007166: cell surface receptor signaling pathway	2.77E-04
10	GO:0010072: primary shoot apical meristem specification	3.33E-04
11	GO:0018107: peptidyl-threonine phosphorylation	3.97E-04
12	GO:0006807: nitrogen compound metabolic process	3.97E-04
13	GO:0009266: response to temperature stimulus	4.30E-04
14	GO:0009933: meristem structural organization	4.30E-04
15	GO:0019762: glucosinolate catabolic process	4.98E-04
16	GO:0010017: red or far-red light signaling pathway	6.40E-04
17	GO:0016117: carotenoid biosynthetic process	7.52E-04
18	GO:0000160: phosphorelay signal transduction system	1.47E-03
19	GO:0009631: cold acclimation	1.57E-03
20	GO:0006857: oligopeptide transport	2.52E-03
21	GO:0048367: shoot system development	2.76E-03
22	GO:0018105: peptidyl-serine phosphorylation	3.12E-03
23	GO:0006413: translational initiation	4.23E-03
24	GO:0007623: circadian rhythm	4.43E-03
25	GO:0010150: leaf senescence	4.43E-03
26	GO:0045892: negative regulation of transcription, DNA-templated	7.96E-03
27	GO:0048364: root development	9.38E-03
28	GO:0009753: response to jasmonic acid	9.57E-03
29	GO:0009735: response to cytokinin	1.28E-02
30	GO:0035556: intracellular signal transduction	1.42E-02
31	GO:0055085: transmembrane transport	1.62E-02
32	GO:0006468: protein phosphorylation	1.76E-02
33	GO:0042742: defense response to bacterium	2.25E-02
34	GO:0015031: protein transport	2.68E-02
35	GO:0009793: embryo development ending in seed dormancy	4.11E-02

Rank	GO Term	Adjusted P value
1	GO:0016166: phytoene dehydrogenase activity	0.00E+00
2	GO:0042937: tripeptide transporter activity	1.65E-05
3	GO:0004075: biotin carboxylase activity	3.04E-05
4	GO:0042936: dipeptide transporter activity	6.61E-05
5	GO:0003989: acetyl-CoA carboxylase activity	8.72E-05
6	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.25E-04
7	GO:0030234: enzyme regulator activity	3.02E-04
8	GO:0019901: protein kinase binding	9.08E-04
9	GO:0004518: nuclease activity	9.90E-04
10	GO:0000156: phosphorelay response regulator activity	1.03E-03
11	GO:0003746: translation elongation factor activity	1.67E-03
12	GO:0005215: transporter activity	2.52E-03
13	GO:0004672: protein kinase activity	3.34E-03
14	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.63E-03
15	GO:0005524: ATP binding	3.93E-03
16	GO:0003743: translation initiation factor activity	4.93E-03
17	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	5.22E-03
18	GO:0003677: DNA binding	1.05E-02
19	GO:0005525: GTP binding	1.94E-02
20	GO:0003729: mRNA binding	3.00E-02

Rank	GO Term	Adjusted P value
1	GO:0009509: chromoplast	3.04E-05
2	GO:0031969: chloroplast membrane	4.63E-04
3	GO:0005886: plasma membrane	2.87E-03
4	GO:0009941: chloroplast envelope	1.06E-02
5	GO:0009507: chloroplast	1.49E-02
6	GO:0009534: chloroplast thylakoid	1.56E-02
7	GO:0005622: intracellular	2.05E-02
8	GO:0009536: plastid	2.61E-02