Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G45040

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
2GO:0071327: cellular response to trehalose stimulus0.00E+00
3GO:0042891: antibiotic transport0.00E+00
4GO:0070212: protein poly-ADP-ribosylation0.00E+00
5GO:0045792: negative regulation of cell size0.00E+00
6GO:1900367: positive regulation of defense response to insect0.00E+00
7GO:0010499: proteasomal ubiquitin-independent protein catabolic process0.00E+00
8GO:0010200: response to chitin1.33E-09
9GO:0009816: defense response to bacterium, incompatible interaction2.27E-08
10GO:0006468: protein phosphorylation6.00E-08
11GO:0060548: negative regulation of cell death1.69E-07
12GO:0009617: response to bacterium9.88E-07
13GO:0009626: plant-type hypersensitive response1.17E-06
14GO:0048281: inflorescence morphogenesis7.70E-06
15GO:0042742: defense response to bacterium2.11E-05
16GO:0080142: regulation of salicylic acid biosynthetic process3.23E-05
17GO:0006952: defense response3.37E-05
18GO:0010942: positive regulation of cell death7.64E-05
19GO:0009751: response to salicylic acid1.27E-04
20GO:0030162: regulation of proteolysis1.78E-04
21GO:0051245: negative regulation of cellular defense response2.11E-04
22GO:0009609: response to symbiotic bacterium2.11E-04
23GO:1901183: positive regulation of camalexin biosynthetic process2.11E-04
24GO:0009270: response to humidity2.11E-04
25GO:0060862: negative regulation of floral organ abscission2.11E-04
26GO:0043562: cellular response to nitrogen levels2.22E-04
27GO:0051865: protein autoubiquitination2.70E-04
28GO:0008202: steroid metabolic process3.21E-04
29GO:0043069: negative regulation of programmed cell death3.76E-04
30GO:0008219: cell death4.62E-04
31GO:0015914: phospholipid transport4.71E-04
32GO:0080151: positive regulation of salicylic acid mediated signaling pathway4.71E-04
33GO:0080185: effector dependent induction by symbiont of host immune response4.71E-04
34GO:0010618: aerenchyma formation4.71E-04
35GO:0006212: uracil catabolic process4.71E-04
36GO:0019483: beta-alanine biosynthetic process4.71E-04
37GO:0015865: purine nucleotide transport4.71E-04
38GO:0031349: positive regulation of defense response4.71E-04
39GO:1902000: homogentisate catabolic process4.71E-04
40GO:0019725: cellular homeostasis4.71E-04
41GO:0043132: NAD transport4.71E-04
42GO:0019441: tryptophan catabolic process to kynurenine4.71E-04
43GO:0012501: programmed cell death4.99E-04
44GO:0002237: response to molecule of bacterial origin6.38E-04
45GO:0007034: vacuolar transport6.38E-04
46GO:0010150: leaf senescence6.76E-04
47GO:0010167: response to nitrate7.14E-04
48GO:0070588: calcium ion transmembrane transport7.14E-04
49GO:0010186: positive regulation of cellular defense response7.67E-04
50GO:0009072: aromatic amino acid family metabolic process7.67E-04
51GO:0010581: regulation of starch biosynthetic process7.67E-04
52GO:1900140: regulation of seedling development7.67E-04
53GO:0010359: regulation of anion channel activity7.67E-04
54GO:0061158: 3'-UTR-mediated mRNA destabilization7.67E-04
55GO:0055074: calcium ion homeostasis7.67E-04
56GO:0071492: cellular response to UV-A7.67E-04
57GO:0044375: regulation of peroxisome size7.67E-04
58GO:0045793: positive regulation of cell size7.67E-04
59GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process8.02E-04
60GO:0051707: response to other organism8.58E-04
61GO:0009863: salicylic acid mediated signaling pathway8.76E-04
62GO:0048194: Golgi vesicle budding1.09E-03
63GO:0070301: cellular response to hydrogen peroxide1.09E-03
64GO:0043207: response to external biotic stimulus1.09E-03
65GO:0046902: regulation of mitochondrial membrane permeability1.09E-03
66GO:0006612: protein targeting to membrane1.09E-03
67GO:0009399: nitrogen fixation1.09E-03
68GO:0015858: nucleoside transport1.09E-03
69GO:0048530: fruit morphogenesis1.09E-03
70GO:0002679: respiratory burst involved in defense response1.09E-03
71GO:0031348: negative regulation of defense response1.15E-03
72GO:2000022: regulation of jasmonic acid mediated signaling pathway1.15E-03
73GO:0009625: response to insect1.25E-03
74GO:0006542: glutamine biosynthetic process1.45E-03
75GO:0080037: negative regulation of cytokinin-activated signaling pathway1.45E-03
76GO:0071486: cellular response to high light intensity1.45E-03
77GO:0009765: photosynthesis, light harvesting1.45E-03
78GO:0010363: regulation of plant-type hypersensitive response1.45E-03
79GO:0010508: positive regulation of autophagy1.45E-03
80GO:0010188: response to microbial phytotoxin1.45E-03
81GO:0042391: regulation of membrane potential1.58E-03
82GO:0061025: membrane fusion1.83E-03
83GO:0010225: response to UV-C1.85E-03
84GO:0030308: negative regulation of cell growth1.85E-03
85GO:0009697: salicylic acid biosynthetic process1.85E-03
86GO:2000762: regulation of phenylpropanoid metabolic process1.85E-03
87GO:0030041: actin filament polymerization1.85E-03
88GO:0046283: anthocyanin-containing compound metabolic process1.85E-03
89GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.90E-03
90GO:0000302: response to reactive oxygen species2.10E-03
91GO:0010193: response to ozone2.10E-03
92GO:1902456: regulation of stomatal opening2.28E-03
93GO:1900425: negative regulation of defense response to bacterium2.28E-03
94GO:0002238: response to molecule of fungal origin2.28E-03
95GO:0009759: indole glucosinolate biosynthetic process2.28E-03
96GO:0010310: regulation of hydrogen peroxide metabolic process2.74E-03
97GO:0000911: cytokinesis by cell plate formation2.74E-03
98GO:0009612: response to mechanical stimulus2.74E-03
99GO:0010199: organ boundary specification between lateral organs and the meristem2.74E-03
100GO:0051607: defense response to virus2.86E-03
101GO:0010044: response to aluminum ion3.23E-03
102GO:0009610: response to symbiotic fungus3.23E-03
103GO:0043090: amino acid import3.23E-03
104GO:0070370: cellular heat acclimation3.23E-03
105GO:0009627: systemic acquired resistance3.38E-03
106GO:0042128: nitrate assimilation3.38E-03
107GO:0009819: drought recovery3.74E-03
108GO:0043068: positive regulation of programmed cell death3.74E-03
109GO:1900150: regulation of defense response to fungus3.74E-03
110GO:0009808: lignin metabolic process4.29E-03
111GO:2000031: regulation of salicylic acid mediated signaling pathway4.29E-03
112GO:0009699: phenylpropanoid biosynthetic process4.29E-03
113GO:0006075: (1->3)-beta-D-glucan biosynthetic process4.29E-03
114GO:0010120: camalexin biosynthetic process4.29E-03
115GO:0010204: defense response signaling pathway, resistance gene-independent4.29E-03
116GO:0007166: cell surface receptor signaling pathway4.59E-03
117GO:0006470: protein dephosphorylation4.59E-03
118GO:0007338: single fertilization4.85E-03
119GO:0010112: regulation of systemic acquired resistance4.85E-03
120GO:1900426: positive regulation of defense response to bacterium5.44E-03
121GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway5.44E-03
122GO:0050832: defense response to fungus5.56E-03
123GO:0006839: mitochondrial transport5.68E-03
124GO:0006995: cellular response to nitrogen starvation6.06E-03
125GO:0009870: defense response signaling pathway, resistance gene-dependent6.06E-03
126GO:0042542: response to hydrogen peroxide6.17E-03
127GO:0030148: sphingolipid biosynthetic process6.69E-03
128GO:0009682: induced systemic resistance6.69E-03
129GO:0052544: defense response by callose deposition in cell wall6.69E-03
130GO:0006979: response to oxidative stress6.75E-03
131GO:0000266: mitochondrial fission7.36E-03
132GO:0015706: nitrate transport7.36E-03
133GO:0002213: defense response to insect7.36E-03
134GO:0010105: negative regulation of ethylene-activated signaling pathway7.36E-03
135GO:0009738: abscisic acid-activated signaling pathway7.42E-03
136GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process7.79E-03
137GO:0006807: nitrogen compound metabolic process8.04E-03
138GO:0009266: response to temperature stimulus8.75E-03
139GO:0034605: cellular response to heat8.75E-03
140GO:0016192: vesicle-mediated transport9.45E-03
141GO:0010053: root epidermal cell differentiation9.48E-03
142GO:0046777: protein autophosphorylation9.66E-03
143GO:0006833: water transport1.02E-02
144GO:0006886: intracellular protein transport1.16E-02
145GO:0006874: cellular calcium ion homeostasis1.18E-02
146GO:0048278: vesicle docking1.26E-02
147GO:0018105: peptidyl-serine phosphorylation1.27E-02
148GO:0009742: brassinosteroid mediated signaling pathway1.31E-02
149GO:0071456: cellular response to hypoxia1.34E-02
150GO:0009814: defense response, incompatible interaction1.34E-02
151GO:0006012: galactose metabolic process1.43E-02
152GO:0009411: response to UV1.43E-02
153GO:0010091: trichome branching1.52E-02
154GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.61E-02
155GO:0034220: ion transmembrane transport1.70E-02
156GO:0046323: glucose import1.79E-02
157GO:0008360: regulation of cell shape1.79E-02
158GO:0006662: glycerol ether metabolic process1.79E-02
159GO:0048544: recognition of pollen1.88E-02
160GO:0006623: protein targeting to vacuole1.98E-02
161GO:0009651: response to salt stress1.99E-02
162GO:0006891: intra-Golgi vesicle-mediated transport2.08E-02
163GO:0007264: small GTPase mediated signal transduction2.18E-02
164GO:0009567: double fertilization forming a zygote and endosperm2.38E-02
165GO:0009737: response to abscisic acid2.44E-02
166GO:0001666: response to hypoxia2.70E-02
167GO:0009607: response to biotic stimulus2.81E-02
168GO:0006906: vesicle fusion2.92E-02
169GO:0009611: response to wounding3.08E-02
170GO:0009826: unidimensional cell growth3.20E-02
171GO:0035556: intracellular signal transduction3.20E-02
172GO:0015031: protein transport3.21E-02
173GO:0009817: defense response to fungus, incompatible interaction3.27E-02
174GO:0010311: lateral root formation3.38E-02
175GO:0006499: N-terminal protein myristoylation3.50E-02
176GO:0009407: toxin catabolic process3.50E-02
177GO:0006970: response to osmotic stress3.57E-02
178GO:0048527: lateral root development3.62E-02
179GO:0010119: regulation of stomatal movement3.62E-02
180GO:0006865: amino acid transport3.74E-02
181GO:0009723: response to ethylene3.83E-02
182GO:0009867: jasmonic acid mediated signaling pathway3.86E-02
183GO:0034599: cellular response to oxidative stress3.99E-02
184GO:0055085: transmembrane transport4.02E-02
185GO:0006887: exocytosis4.37E-02
186GO:0006631: fatty acid metabolic process4.37E-02
187GO:0016567: protein ubiquitination4.40E-02
188GO:0044550: secondary metabolite biosynthetic process4.46E-02
189GO:0045454: cell redox homeostasis4.90E-02
RankGO TermAdjusted P value
1GO:0016504: peptidase activator activity0.00E+00
2GO:0005365: myo-inositol transmembrane transporter activity0.00E+00
3GO:0016034: maleylacetoacetate isomerase activity0.00E+00
4GO:0015576: sorbitol transmembrane transporter activity0.00E+00
5GO:0015370: solute:sodium symporter activity0.00E+00
6GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
7GO:0003837: beta-ureidopropionase activity0.00E+00
8GO:0070577: lysine-acetylated histone binding0.00E+00
9GO:0015591: D-ribose transmembrane transporter activity0.00E+00
10GO:0015575: mannitol transmembrane transporter activity0.00E+00
11GO:0015148: D-xylose transmembrane transporter activity0.00E+00
12GO:0044610: FMN transmembrane transporter activity0.00E+00
13GO:0004713: protein tyrosine kinase activity1.62E-07
14GO:0005516: calmodulin binding7.70E-07
15GO:0016301: kinase activity1.19E-05
16GO:0005524: ATP binding2.23E-05
17GO:0004674: protein serine/threonine kinase activity8.12E-05
18GO:0004714: transmembrane receptor protein tyrosine kinase activity1.78E-04
19GO:1901149: salicylic acid binding2.11E-04
20GO:0080042: ADP-glucose pyrophosphohydrolase activity2.11E-04
21GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity2.11E-04
22GO:0015230: FAD transmembrane transporter activity2.11E-04
23GO:0015168: glycerol transmembrane transporter activity2.11E-04
24GO:0008142: oxysterol binding2.22E-04
25GO:0004683: calmodulin-dependent protein kinase activity4.04E-04
26GO:0005509: calcium ion binding4.29E-04
27GO:0004566: beta-glucuronidase activity4.71E-04
28GO:0015228: coenzyme A transmembrane transporter activity4.71E-04
29GO:0080041: ADP-ribose pyrophosphohydrolase activity4.71E-04
30GO:0051724: NAD transporter activity4.71E-04
31GO:0017110: nucleoside-diphosphatase activity4.71E-04
32GO:0032934: sterol binding4.71E-04
33GO:0045140: inositol phosphoceramide synthase activity4.71E-04
34GO:0004061: arylformamidase activity4.71E-04
35GO:0005388: calcium-transporting ATPase activity5.67E-04
36GO:0030552: cAMP binding7.14E-04
37GO:0030553: cGMP binding7.14E-04
38GO:0016595: glutamate binding7.67E-04
39GO:0005216: ion channel activity9.63E-04
40GO:0033612: receptor serine/threonine kinase binding1.05E-03
41GO:0005354: galactose transmembrane transporter activity1.09E-03
42GO:0004672: protein kinase activity1.20E-03
43GO:0031625: ubiquitin protein ligase binding1.41E-03
44GO:0070628: proteasome binding1.45E-03
45GO:0016004: phospholipase activator activity1.45E-03
46GO:0015204: urea transmembrane transporter activity1.45E-03
47GO:0005249: voltage-gated potassium channel activity1.58E-03
48GO:0030551: cyclic nucleotide binding1.58E-03
49GO:0005471: ATP:ADP antiporter activity1.85E-03
50GO:0004356: glutamate-ammonia ligase activity1.85E-03
51GO:0015145: monosaccharide transmembrane transporter activity1.85E-03
52GO:0080122: AMP transmembrane transporter activity1.85E-03
53GO:0005496: steroid binding1.85E-03
54GO:0047631: ADP-ribose diphosphatase activity1.85E-03
55GO:0000210: NAD+ diphosphatase activity2.28E-03
56GO:0004029: aldehyde dehydrogenase (NAD) activity2.28E-03
57GO:0005515: protein binding2.54E-03
58GO:0015217: ADP transmembrane transporter activity2.74E-03
59GO:0102391: decanoate--CoA ligase activity2.74E-03
60GO:0004012: phospholipid-translocating ATPase activity2.74E-03
61GO:0005347: ATP transmembrane transporter activity2.74E-03
62GO:0004467: long-chain fatty acid-CoA ligase activity3.23E-03
63GO:0009931: calcium-dependent protein serine/threonine kinase activity3.38E-03
64GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.54E-03
65GO:0004034: aldose 1-epimerase activity3.74E-03
66GO:0005544: calcium-dependent phospholipid binding3.74E-03
67GO:0003843: 1,3-beta-D-glucan synthase activity4.29E-03
68GO:0015112: nitrate transmembrane transporter activity5.44E-03
69GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity5.44E-03
70GO:0004712: protein serine/threonine/tyrosine kinase activity5.45E-03
71GO:0004364: glutathione transferase activity6.17E-03
72GO:0005484: SNAP receptor activity6.43E-03
73GO:0005543: phospholipid binding6.69E-03
74GO:0008794: arsenate reductase (glutaredoxin) activity6.69E-03
75GO:0015293: symporter activity7.22E-03
76GO:0005262: calcium channel activity8.04E-03
77GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism8.04E-03
78GO:0004190: aspartic-type endopeptidase activity9.48E-03
79GO:0003712: transcription cofactor activity9.48E-03
80GO:0004970: ionotropic glutamate receptor activity9.48E-03
81GO:0005217: intracellular ligand-gated ion channel activity9.48E-03
82GO:0003954: NADH dehydrogenase activity1.10E-02
83GO:0004842: ubiquitin-protein transferase activity1.17E-02
84GO:0043424: protein histidine kinase binding1.18E-02
85GO:0004722: protein serine/threonine phosphatase activity1.25E-02
86GO:0015035: protein disulfide oxidoreductase activity1.27E-02
87GO:0003727: single-stranded RNA binding1.52E-02
88GO:0047134: protein-disulfide reductase activity1.61E-02
89GO:0008080: N-acetyltransferase activity1.79E-02
90GO:0001085: RNA polymerase II transcription factor binding1.79E-02
91GO:0004791: thioredoxin-disulfide reductase activity1.88E-02
92GO:0016853: isomerase activity1.88E-02
93GO:0005355: glucose transmembrane transporter activity1.88E-02
94GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.28E-02
95GO:0015250: water channel activity2.70E-02
96GO:0016168: chlorophyll binding2.81E-02
97GO:0004806: triglyceride lipase activity3.04E-02
98GO:0004222: metalloendopeptidase activity3.50E-02
99GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding3.62E-02
100GO:0000987: core promoter proximal region sequence-specific DNA binding3.99E-02
101GO:0000149: SNARE binding4.11E-02
102GO:0030246: carbohydrate binding4.32E-02
103GO:0061630: ubiquitin protein ligase activity4.32E-02
104GO:0043565: sequence-specific DNA binding4.33E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane1.28E-18
2GO:0016021: integral component of membrane1.87E-08
3GO:0005887: integral component of plasma membrane4.25E-05
4GO:0005911: cell-cell junction2.11E-04
5GO:0031304: intrinsic component of mitochondrial inner membrane4.71E-04
6GO:0005901: caveola4.71E-04
7GO:0046861: glyoxysomal membrane7.67E-04
8GO:0005775: vacuolar lumen1.09E-03
9GO:0030658: transport vesicle membrane1.09E-03
10GO:0000164: protein phosphatase type 1 complex1.85E-03
11GO:0009504: cell plate1.97E-03
12GO:0009506: plasmodesma2.26E-03
13GO:0005794: Golgi apparatus2.53E-03
14GO:0019005: SCF ubiquitin ligase complex3.94E-03
15GO:0009514: glyoxysome4.29E-03
16GO:0005779: integral component of peroxisomal membrane4.29E-03
17GO:0000148: 1,3-beta-D-glucan synthase complex4.29E-03
18GO:0031902: late endosome membrane5.93E-03
19GO:0005740: mitochondrial envelope6.06E-03
20GO:0017119: Golgi transport complex6.06E-03
21GO:0005765: lysosomal membrane6.69E-03
22GO:0005773: vacuole7.44E-03
23GO:0031012: extracellular matrix8.04E-03
24GO:0005795: Golgi stack9.48E-03
25GO:0016020: membrane1.11E-02
26GO:0005839: proteasome core complex1.26E-02
27GO:0005741: mitochondrial outer membrane1.26E-02
28GO:0005789: endoplasmic reticulum membrane1.39E-02
29GO:0005783: endoplasmic reticulum1.40E-02
30GO:0005802: trans-Golgi network1.59E-02
31GO:0009523: photosystem II1.98E-02
32GO:0005774: vacuolar membrane2.11E-02
33GO:0071944: cell periphery2.28E-02
34GO:0005778: peroxisomal membrane2.49E-02
35GO:0005788: endoplasmic reticulum lumen2.81E-02
36GO:0005829: cytosol2.87E-02
37GO:0005667: transcription factor complex2.92E-02
38GO:0000151: ubiquitin ligase complex3.27E-02
39GO:0005777: peroxisome3.55E-02
40GO:0031201: SNARE complex4.37E-02
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Gene type



Gene DE type