co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G45030

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0044843: cell cycle G1/S phase transition	0.00E+00
2	GO:0006412: translation	2.36E-123
3	GO:0042254: ribosome biogenesis	2.98E-46
4	GO:0000027: ribosomal large subunit assembly	2.92E-11
5	GO:0009735: response to cytokinin	3.36E-09
6	GO:0000028: ribosomal small subunit assembly	1.06E-06
7	GO:0042274: ribosomal small subunit biogenesis	1.47E-05
8	GO:0009793: embryo development ending in seed dormancy	4.04E-05
9	GO:0009955: adaxial/abaxial pattern specification	5.10E-05
10	GO:0006407: rRNA export from nucleus	1.33E-04
11	GO:0030490: maturation of SSU-rRNA	1.33E-04
12	GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	1.33E-04
13	GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	1.33E-04
14	GO:0006626: protein targeting to mitochondrion	3.02E-04
15	GO:0048569: post-embryonic animal organ development	3.07E-04
16	GO:0009967: positive regulation of signal transduction	3.07E-04
17	GO:0009965: leaf morphogenesis	4.45E-04
18	GO:1902626: assembly of large subunit precursor of preribosome	5.06E-04
19	GO:0002181: cytoplasmic translation	5.06E-04
20	GO:0010476: gibberellin mediated signaling pathway	5.06E-04
21	GO:0042256: mature ribosome assembly	5.06E-04
22	GO:0006364: rRNA processing	5.60E-04
23	GO:0040007: growth	6.80E-04
24	GO:0070301: cellular response to hydrogen peroxide	7.24E-04
25	GO:0006241: CTP biosynthetic process	7.24E-04
26	GO:0006165: nucleoside diphosphate phosphorylation	7.24E-04
27	GO:0006228: UTP biosynthetic process	7.24E-04
28	GO:0044205: 'de novo' UMP biosynthetic process	9.59E-04
29	GO:0006183: GTP biosynthetic process	9.59E-04
30	GO:0071493: cellular response to UV-B	1.21E-03
31	GO:0006414: translational elongation	1.25E-03
32	GO:0000470: maturation of LSU-rRNA	1.49E-03
33	GO:0000911: cytokinesis by cell plate formation	1.78E-03
34	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	2.09E-03
35	GO:0001558: regulation of cell growth	2.77E-03
36	GO:0006526: arginine biosynthetic process	2.77E-03
37	GO:0008283: cell proliferation	3.40E-03
38	GO:0000387: spliceosomal snRNP assembly	3.50E-03
39	GO:0009409: response to cold	3.64E-03
40	GO:0010015: root morphogenesis	4.30E-03
41	GO:0006913: nucleocytoplasmic transport	4.30E-03
42	GO:0046686: response to cadmium ion	4.65E-03
43	GO:0006820: anion transport	4.72E-03
44	GO:0010229: inflorescence development	5.15E-03
45	GO:0010102: lateral root morphogenesis	5.15E-03
46	GO:0048467: gynoecium development	5.60E-03
47	GO:0006541: glutamine metabolic process	5.60E-03
48	GO:0030150: protein import into mitochondrial matrix	7.01E-03
49	GO:0051302: regulation of cell division	7.51E-03
50	GO:0007005: mitochondrion organization	8.55E-03
51	GO:0071215: cellular response to abscisic acid stimulus	9.08E-03
52	GO:0006413: translational initiation	1.05E-02
53	GO:0000413: protein peptidyl-prolyl isomerization	1.08E-02
54	GO:0009749: response to glucose	1.25E-02
55	GO:0009791: post-embryonic development	1.25E-02
56	GO:0032502: developmental process	1.38E-02
57	GO:0010090: trichome morphogenesis	1.44E-02
58	GO:0006811: ion transport	2.21E-02
59	GO:0010043: response to zinc ion	2.29E-02
60	GO:0009644: response to high light intensity	3.09E-02
61	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	3.35E-02
62	GO:0006417: regulation of translation	3.89E-02
63	GO:0009620: response to fungus	4.36E-02
64	GO:0009734: auxin-activated signaling pathway	4.48E-02

Rank	GO Term	Adjusted P value
1	GO:0016018: cyclosporin A binding	0.00E+00
2	GO:0003735: structural constituent of ribosome	3.83E-149
3	GO:0003729: mRNA binding	2.90E-43
4	GO:0019843: rRNA binding	1.70E-08
5	GO:0008097: 5S rRNA binding	7.85E-06
6	GO:0004088: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity	1.33E-04
7	GO:0005078: MAP-kinase scaffold activity	3.07E-04
8	GO:0032947: protein complex scaffold	5.06E-04
9	GO:0070181: small ribosomal subunit rRNA binding	5.06E-04
10	GO:0004550: nucleoside diphosphate kinase activity	7.24E-04
11	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.09E-03
12	GO:0008235: metalloexopeptidase activity	2.09E-03
13	GO:0015288: porin activity	2.42E-03
14	GO:0008308: voltage-gated anion channel activity	2.77E-03
15	GO:0015266: protein channel activity	5.15E-03
16	GO:0046872: metal ion binding	1.44E-02
17	GO:0003746: translation elongation factor activity	2.44E-02
18	GO:0003723: RNA binding	2.85E-02
19	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.26E-02

Rank	GO Term	Adjusted P value
1	GO:0043186: P granule	0.00E+00
2	GO:0022626: cytosolic ribosome	6.96E-118
3	GO:0005840: ribosome	8.24E-90
4	GO:0022625: cytosolic large ribosomal subunit	1.93E-87
5	GO:0022627: cytosolic small ribosomal subunit	1.64E-58
6	GO:0005730: nucleolus	2.76E-42
7	GO:0005829: cytosol	1.33E-37
8	GO:0005737: cytoplasm	4.11E-35
9	GO:0009506: plasmodesma	1.34E-33
10	GO:0015934: large ribosomal subunit	4.11E-20
11	GO:0005774: vacuolar membrane	1.96E-16
12	GO:0016020: membrane	4.71E-15
13	GO:0005886: plasma membrane	5.24E-11
14	GO:0005773: vacuole	1.83E-10
15	GO:0005618: cell wall	2.24E-09
16	GO:0015935: small ribosomal subunit	6.10E-09
17	GO:0009507: chloroplast	6.35E-06
18	GO:0005742: mitochondrial outer membrane translocase complex	1.12E-04
19	GO:0005951: carbamoyl-phosphate synthase complex	1.33E-04
20	GO:0030686: 90S preribosome	1.33E-04
21	GO:0034719: SMN-Sm protein complex	5.06E-04
22	GO:0005853: eukaryotic translation elongation factor 1 complex	5.06E-04
23	GO:0005682: U5 snRNP	9.59E-04
24	GO:0005687: U4 snRNP	1.21E-03
25	GO:0097526: spliceosomal tri-snRNP complex	1.21E-03
26	GO:0005689: U12-type spliceosomal complex	1.78E-03
27	GO:0071004: U2-type prespliceosome	2.42E-03
28	GO:0046930: pore complex	2.77E-03
29	GO:0005685: U1 snRNP	3.13E-03
30	GO:0071011: precatalytic spliceosome	3.50E-03
31	GO:0005686: U2 snRNP	3.89E-03
32	GO:0071013: catalytic step 2 spliceosome	4.30E-03
33	GO:0019013: viral nucleocapsid	5.15E-03
34	GO:0005758: mitochondrial intermembrane space	7.01E-03
35	GO:0005741: mitochondrial outer membrane	8.02E-03
36	GO:0030529: intracellular ribonucleoprotein complex	1.71E-02
37	GO:0005622: intracellular	2.74E-02
38	GO:0005743: mitochondrial inner membrane	2.97E-02
39	GO:0005681: spliceosomal complex	4.07E-02
40	GO:0005834: heterotrimeric G-protein complex	4.26E-02
41	GO:0005732: small nucleolar ribonucleoprotein complex	4.94E-02