co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G44750

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006364: rRNA processing	1.09E-08
2	GO:0006412: translation	1.24E-06
3	GO:0000494: box C/D snoRNA 3'-end processing	6.71E-06
4	GO:1990258: histone glutamine methylation	6.71E-06
5	GO:0042254: ribosome biogenesis	1.56E-05
6	GO:0031167: rRNA methylation	9.53E-05
7	GO:0001510: RNA methylation	2.33E-04
8	GO:0010162: seed dormancy process	3.28E-04
9	GO:0006820: anion transport	3.96E-04
10	GO:0006626: protein targeting to mitochondrion	4.30E-04
11	GO:0009944: polarity specification of adaxial/abaxial axis	5.76E-04
12	GO:0000027: ribosomal large subunit assembly	5.76E-04
13	GO:0030150: protein import into mitochondrial matrix	5.76E-04
14	GO:0009294: DNA mediated transformation	7.31E-04
15	GO:0008033: tRNA processing	8.55E-04
16	GO:0010501: RNA secondary structure unwinding	8.55E-04
17	GO:0000413: protein peptidyl-prolyl isomerization	8.55E-04
18	GO:0009735: response to cytokinin	1.19E-03
19	GO:0006811: ion transport	1.65E-03
20	GO:0010043: response to zinc ion	1.70E-03
21	GO:0009553: embryo sac development	3.25E-03
22	GO:0046686: response to cadmium ion	4.00E-03
23	GO:0006413: translational initiation	4.59E-03
24	GO:0045892: negative regulation of transcription, DNA-templated	8.66E-03
25	GO:0009555: pollen development	1.49E-02
26	GO:0055085: transmembrane transport	1.76E-02
27	GO:0006457: protein folding	1.79E-02
28	GO:0006414: translational elongation	1.98E-02
29	GO:0009409: response to cold	3.05E-02
30	GO:0007165: signal transduction	4.15E-02
31	GO:0009793: embryo development ending in seed dormancy	4.47E-02

Rank	GO Term	Adjusted P value
1	GO:0016018: cyclosporin A binding	0.00E+00
2	GO:0003735: structural constituent of ribosome	1.38E-09
3	GO:0003723: RNA binding	4.08E-06
4	GO:1990259: histone-glutamine methyltransferase activity	6.71E-06
5	GO:0008649: rRNA methyltransferase activity	3.35E-05
6	GO:0008026: ATP-dependent helicase activity	1.65E-04
7	GO:0030515: snoRNA binding	1.74E-04
8	GO:0015288: porin activity	2.03E-04
9	GO:0008308: voltage-gated anion channel activity	2.33E-04
10	GO:0003729: mRNA binding	4.26E-04
11	GO:0015266: protein channel activity	4.30E-04
12	GO:0004407: histone deacetylase activity	5.76E-04
13	GO:0004004: ATP-dependent RNA helicase activity	1.45E-03
14	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.55E-03
15	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.38E-03
16	GO:0003743: translation initiation factor activity	5.36E-03
17	GO:0005507: copper ion binding	1.91E-02

Rank	GO Term	Adjusted P value
1	GO:0005730: nucleolus	1.59E-15
2	GO:0005840: ribosome	1.35E-10
3	GO:0022625: cytosolic large ribosomal subunit	4.81E-09
4	GO:0022626: cytosolic ribosome	5.13E-08
5	GO:0005829: cytosol	9.96E-07
6	GO:0031428: box C/D snoRNP complex	1.20E-04
7	GO:0046930: pore complex	2.33E-04
8	GO:0005742: mitochondrial outer membrane translocase complex	2.33E-04
9	GO:0015030: Cajal body	2.95E-04
10	GO:0032040: small-subunit processome	3.96E-04
11	GO:0005741: mitochondrial outer membrane	6.53E-04
12	GO:0016592: mediator complex	1.07E-03
13	GO:0009506: plasmodesma	1.17E-03
14	GO:0005774: vacuolar membrane	1.21E-03
15	GO:0005618: cell wall	1.43E-03
16	GO:0015934: large ribosomal subunit	1.70E-03
17	GO:0005634: nucleus	6.91E-03
18	GO:0005737: cytoplasm	6.98E-03
19	GO:0005743: mitochondrial inner membrane	9.42E-03
20	GO:0016020: membrane	9.74E-03
21	GO:0005773: vacuole	1.36E-02
22	GO:0005886: plasma membrane	4.04E-02
23	GO:0009535: chloroplast thylakoid membrane	4.37E-02