co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G44720

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
2	GO:0006858: extracellular transport	0.00E+00
3	GO:0030970: retrograde protein transport, ER to cytosol	0.00E+00
4	GO:0036258: multivesicular body assembly	0.00E+00
5	GO:0046109: uridine biosynthetic process	0.00E+00
6	GO:0042430: indole-containing compound metabolic process	0.00E+00
7	GO:0006182: cGMP biosynthetic process	0.00E+00
8	GO:0043462: regulation of ATPase activity	0.00E+00
9	GO:0070676: intralumenal vesicle formation	1.06E-05
10	GO:0009617: response to bacterium	5.84E-05
11	GO:0006468: protein phosphorylation	9.19E-05
12	GO:0010726: positive regulation of hydrogen peroxide metabolic process	1.58E-04
13	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.58E-04
14	GO:0009962: regulation of flavonoid biosynthetic process	1.58E-04
15	GO:0009270: response to humidity	1.58E-04
16	GO:0006952: defense response	3.55E-04
17	GO:0019374: galactolipid metabolic process	3.60E-04
18	GO:0015865: purine nucleotide transport	3.60E-04
19	GO:1902000: homogentisate catabolic process	3.60E-04
20	GO:0019725: cellular homeostasis	3.60E-04
21	GO:0097054: L-glutamate biosynthetic process	3.60E-04
22	GO:0046740: transport of virus in host, cell to cell	3.60E-04
23	GO:0031648: protein destabilization	3.60E-04
24	GO:0071395: cellular response to jasmonic acid stimulus	3.60E-04
25	GO:0007034: vacuolar transport	4.31E-04
26	GO:0010167: response to nitrate	4.83E-04
27	GO:0046686: response to cadmium ion	5.52E-04
28	GO:0009072: aromatic amino acid family metabolic process	5.89E-04
29	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	5.89E-04
30	GO:0006556: S-adenosylmethionine biosynthetic process	5.89E-04
31	GO:0034051: negative regulation of plant-type hypersensitive response	5.89E-04
32	GO:0045793: positive regulation of cell size	5.89E-04
33	GO:0010186: positive regulation of cellular defense response	5.89E-04
34	GO:0010071: root meristem specification	8.43E-04
35	GO:0070301: cellular response to hydrogen peroxide	8.43E-04
36	GO:0046902: regulation of mitochondrial membrane permeability	8.43E-04
37	GO:0006537: glutamate biosynthetic process	8.43E-04
38	GO:0009052: pentose-phosphate shunt, non-oxidative branch	8.43E-04
39	GO:0002679: respiratory burst involved in defense response	8.43E-04
40	GO:0001676: long-chain fatty acid metabolic process	8.43E-04
41	GO:0045017: glycerolipid biosynthetic process	8.43E-04
42	GO:0046777: protein autophosphorylation	1.08E-03
43	GO:0019676: ammonia assimilation cycle	1.12E-03
44	GO:0060548: negative regulation of cell death	1.12E-03
45	GO:0046345: abscisic acid catabolic process	1.12E-03
46	GO:0010225: response to UV-C	1.41E-03
47	GO:0000304: response to singlet oxygen	1.41E-03
48	GO:0030041: actin filament polymerization	1.41E-03
49	GO:0046283: anthocyanin-containing compound metabolic process	1.41E-03
50	GO:0006561: proline biosynthetic process	1.74E-03
51	GO:0010942: positive regulation of cell death	1.74E-03
52	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	1.74E-03
53	GO:2000067: regulation of root morphogenesis	2.09E-03
54	GO:0010555: response to mannitol	2.09E-03
55	GO:0071446: cellular response to salicylic acid stimulus	2.45E-03
56	GO:1900056: negative regulation of leaf senescence	2.45E-03
57	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	2.45E-03
58	GO:0006644: phospholipid metabolic process	2.84E-03
59	GO:0009061: anaerobic respiration	2.84E-03
60	GO:0010078: maintenance of root meristem identity	2.84E-03
61	GO:0010492: maintenance of shoot apical meristem identity	2.84E-03
62	GO:0007186: G-protein coupled receptor signaling pathway	3.25E-03
63	GO:0010262: somatic embryogenesis	3.25E-03
64	GO:0010120: camalexin biosynthetic process	3.25E-03
65	GO:0006979: response to oxidative stress	3.29E-03
66	GO:0007338: single fertilization	3.67E-03
67	GO:0006098: pentose-phosphate shunt	3.67E-03
68	GO:0051865: protein autoubiquitination	3.67E-03
69	GO:0030042: actin filament depolymerization	4.12E-03
70	GO:0008202: steroid metabolic process	4.12E-03
71	GO:0051707: response to other organism	4.29E-03
72	GO:0009611: response to wounding	4.34E-03
73	GO:0006896: Golgi to vacuole transport	4.58E-03
74	GO:0006032: chitin catabolic process	4.58E-03
75	GO:0015031: protein transport	4.94E-03
76	GO:0006855: drug transmembrane transport	5.00E-03
77	GO:0015770: sucrose transport	5.05E-03
78	GO:0000272: polysaccharide catabolic process	5.05E-03
79	GO:0009750: response to fructose	5.05E-03
80	GO:0030148: sphingolipid biosynthetic process	5.05E-03
81	GO:0031347: regulation of defense response	5.19E-03
82	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	5.51E-03
83	GO:0010200: response to chitin	5.51E-03
84	GO:0000266: mitochondrial fission	5.55E-03
85	GO:0012501: programmed cell death	5.55E-03
86	GO:0015706: nitrate transport	5.55E-03
87	GO:0071365: cellular response to auxin stimulus	5.55E-03
88	GO:0044550: secondary metabolite biosynthetic process	5.87E-03
89	GO:0055085: transmembrane transport	6.03E-03
90	GO:0006094: gluconeogenesis	6.06E-03
91	GO:0009718: anthocyanin-containing compound biosynthetic process	6.06E-03
92	GO:0002237: response to molecule of bacterial origin	6.59E-03
93	GO:0009266: response to temperature stimulus	6.59E-03
94	GO:0042343: indole glucosinolate metabolic process	7.13E-03
95	GO:0010053: root epidermal cell differentiation	7.13E-03
96	GO:0009626: plant-type hypersensitive response	7.27E-03
97	GO:0005992: trehalose biosynthetic process	8.27E-03
98	GO:0018105: peptidyl-serine phosphorylation	8.46E-03
99	GO:0009408: response to heat	8.66E-03
100	GO:0006874: cellular calcium ion homeostasis	8.86E-03
101	GO:0098542: defense response to other organism	9.46E-03
102	GO:0016998: cell wall macromolecule catabolic process	9.46E-03
103	GO:0010017: red or far-red light signaling pathway	1.01E-02
104	GO:0009814: defense response, incompatible interaction	1.01E-02
105	GO:0035428: hexose transmembrane transport	1.01E-02
106	GO:0006730: one-carbon metabolic process	1.01E-02
107	GO:0030433: ubiquitin-dependent ERAD pathway	1.01E-02
108	GO:0031348: negative regulation of defense response	1.01E-02
109	GO:0007275: multicellular organism development	1.06E-02
110	GO:0009693: ethylene biosynthetic process	1.07E-02
111	GO:0019722: calcium-mediated signaling	1.14E-02
112	GO:0010118: stomatal movement	1.27E-02
113	GO:0080022: primary root development	1.27E-02
114	GO:0046323: glucose import	1.34E-02
115	GO:0040008: regulation of growth	1.36E-02
116	GO:0048544: recognition of pollen	1.41E-02
117	GO:0009749: response to glucose	1.48E-02
118	GO:0055072: iron ion homeostasis	1.48E-02
119	GO:0002229: defense response to oomycetes	1.56E-02
120	GO:0010193: response to ozone	1.56E-02
121	GO:0006891: intra-Golgi vesicle-mediated transport	1.56E-02
122	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.59E-02
123	GO:0007166: cell surface receptor signaling pathway	1.63E-02
124	GO:0010468: regulation of gene expression	1.70E-02
125	GO:0071281: cellular response to iron ion	1.71E-02
126	GO:1901657: glycosyl compound metabolic process	1.71E-02
127	GO:0009738: abscisic acid-activated signaling pathway	1.72E-02
128	GO:0009567: double fertilization forming a zygote and endosperm	1.78E-02
129	GO:0035556: intracellular signal transduction	1.92E-02
130	GO:0009911: positive regulation of flower development	2.02E-02
131	GO:0009615: response to virus	2.02E-02
132	GO:0009816: defense response to bacterium, incompatible interaction	2.10E-02
133	GO:0042128: nitrate assimilation	2.19E-02
134	GO:0006888: ER to Golgi vesicle-mediated transport	2.27E-02
135	GO:0048573: photoperiodism, flowering	2.27E-02
136	GO:0030244: cellulose biosynthetic process	2.44E-02
137	GO:0006499: N-terminal protein myristoylation	2.62E-02
138	GO:0009407: toxin catabolic process	2.62E-02
139	GO:0009651: response to salt stress	2.63E-02
140	GO:0010043: response to zinc ion	2.71E-02
141	GO:0016192: vesicle-mediated transport	2.88E-02
142	GO:0006099: tricarboxylic acid cycle	2.98E-02
143	GO:0006839: mitochondrial transport	3.17E-02
144	GO:0006897: endocytosis	3.27E-02
145	GO:0006631: fatty acid metabolic process	3.27E-02
146	GO:0045892: negative regulation of transcription, DNA-templated	3.33E-02
147	GO:0042542: response to hydrogen peroxide	3.36E-02
148	GO:0006886: intracellular protein transport	3.38E-02
149	GO:0009744: response to sucrose	3.46E-02
150	GO:0009644: response to high light intensity	3.66E-02
151	GO:0008643: carbohydrate transport	3.66E-02
152	GO:0009737: response to abscisic acid	3.75E-02
153	GO:0016042: lipid catabolic process	3.92E-02
154	GO:0009751: response to salicylic acid	3.98E-02
155	GO:0009846: pollen germination	4.07E-02
156	GO:0042538: hyperosmotic salinity response	4.07E-02
157	GO:0009809: lignin biosynthetic process	4.28E-02
158	GO:0051603: proteolysis involved in cellular protein catabolic process	4.38E-02
159	GO:0008152: metabolic process	4.44E-02
160	GO:0006096: glycolytic process	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0015930: glutamate synthase activity	0.00E+00
2	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
3	GO:0005524: ATP binding	1.77E-06
4	GO:0004713: protein tyrosine kinase activity	6.06E-06
5	GO:0004674: protein serine/threonine kinase activity	6.38E-05
6	GO:0004733: pyridoxamine-phosphate oxidase activity	1.58E-04
7	GO:0016041: glutamate synthase (ferredoxin) activity	1.58E-04
8	GO:0032934: sterol binding	3.60E-04
9	GO:0045140: inositol phosphoceramide synthase activity	3.60E-04
10	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	3.60E-04
11	GO:0008517: folic acid transporter activity	3.60E-04
12	GO:0031683: G-protein beta/gamma-subunit complex binding	5.89E-04
13	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	5.89E-04
14	GO:0004751: ribose-5-phosphate isomerase activity	5.89E-04
15	GO:0004383: guanylate cyclase activity	5.89E-04
16	GO:0004478: methionine adenosyltransferase activity	5.89E-04
17	GO:0001664: G-protein coupled receptor binding	5.89E-04
18	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.12E-03
19	GO:0010181: FMN binding	1.24E-03
20	GO:0005515: protein binding	1.30E-03
21	GO:0010294: abscisic acid glucosyltransferase activity	1.41E-03
22	GO:0015145: monosaccharide transmembrane transporter activity	1.41E-03
23	GO:0000104: succinate dehydrogenase activity	1.41E-03
24	GO:0008177: succinate dehydrogenase (ubiquinone) activity	1.41E-03
25	GO:0051538: 3 iron, 4 sulfur cluster binding	1.41E-03
26	GO:0005471: ATP:ADP antiporter activity	1.41E-03
27	GO:0004332: fructose-bisphosphate aldolase activity	1.74E-03
28	GO:0047714: galactolipase activity	1.74E-03
29	GO:0102391: decanoate--CoA ligase activity	2.09E-03
30	GO:0004144: diacylglycerol O-acyltransferase activity	2.09E-03
31	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.26E-03
32	GO:0004683: calmodulin-dependent protein kinase activity	2.38E-03
33	GO:0004143: diacylglycerol kinase activity	2.45E-03
34	GO:0008506: sucrose:proton symporter activity	2.45E-03
35	GO:0102425: myricetin 3-O-glucosyltransferase activity	2.45E-03
36	GO:0102360: daphnetin 3-O-glucosyltransferase activity	2.45E-03
37	GO:0004620: phospholipase activity	2.45E-03
38	GO:0004467: long-chain fatty acid-CoA ligase activity	2.45E-03
39	GO:0008194: UDP-glycosyltransferase activity	2.66E-03
40	GO:0035064: methylated histone binding	2.84E-03
41	GO:0047893: flavonol 3-O-glucosyltransferase activity	2.84E-03
42	GO:0005544: calcium-dependent phospholipid binding	2.84E-03
43	GO:0052747: sinapyl alcohol dehydrogenase activity	2.84E-03
44	GO:0008142: oxysterol binding	3.25E-03
45	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	3.25E-03
46	GO:0003951: NAD+ kinase activity	3.25E-03
47	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.64E-03
48	GO:0071949: FAD binding	3.67E-03
49	GO:0003678: DNA helicase activity	3.67E-03
50	GO:0045309: protein phosphorylated amino acid binding	4.12E-03
51	GO:0047617: acyl-CoA hydrolase activity	4.12E-03
52	GO:0015112: nitrate transmembrane transporter activity	4.12E-03
53	GO:0004568: chitinase activity	4.58E-03
54	GO:0019904: protein domain specific binding	5.05E-03
55	GO:0008559: xenobiotic-transporting ATPase activity	5.05E-03
56	GO:0045551: cinnamyl-alcohol dehydrogenase activity	5.55E-03
57	GO:0031072: heat shock protein binding	6.06E-03
58	GO:0004672: protein kinase activity	6.36E-03
59	GO:0030246: carbohydrate binding	6.58E-03
60	GO:0004871: signal transducer activity	7.04E-03
61	GO:0008061: chitin binding	7.13E-03
62	GO:0005217: intracellular ligand-gated ion channel activity	7.13E-03
63	GO:0004970: ionotropic glutamate receptor activity	7.13E-03
64	GO:0080044: quercetin 7-O-glucosyltransferase activity	7.50E-03
65	GO:0080043: quercetin 3-O-glucosyltransferase activity	7.50E-03
66	GO:0003779: actin binding	7.97E-03
67	GO:0043130: ubiquitin binding	8.27E-03
68	GO:0043424: protein histidine kinase binding	8.86E-03
69	GO:0035251: UDP-glucosyltransferase activity	9.46E-03
70	GO:0004298: threonine-type endopeptidase activity	9.46E-03
71	GO:0022891: substrate-specific transmembrane transporter activity	1.07E-02
72	GO:0005509: calcium ion binding	1.08E-02
73	GO:0005355: glucose transmembrane transporter activity	1.41E-02
74	GO:0016887: ATPase activity	1.51E-02
75	GO:0004197: cysteine-type endopeptidase activity	1.63E-02
76	GO:0016301: kinase activity	1.76E-02
77	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.81E-02
78	GO:0102483: scopolin beta-glucosidase activity	2.27E-02
79	GO:0004806: triglyceride lipase activity	2.27E-02
80	GO:0030247: polysaccharide binding	2.27E-02
81	GO:0015238: drug transmembrane transporter activity	2.53E-02
82	GO:0050660: flavin adenine dinucleotide binding	2.56E-02
83	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.71E-02
84	GO:0050897: cobalt ion binding	2.71E-02
85	GO:0004497: monooxygenase activity	2.74E-02
86	GO:0005516: calmodulin binding	2.99E-02
87	GO:0008422: beta-glucosidase activity	3.08E-02
88	GO:0004364: glutathione transferase activity	3.36E-02
89	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.54E-02
90	GO:0035091: phosphatidylinositol binding	3.66E-02
91	GO:0003924: GTPase activity	4.03E-02
92	GO:0009055: electron carrier activity	4.32E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	3.05E-09
2	GO:0005911: cell-cell junction	1.58E-04
3	GO:0000813: ESCRT I complex	1.41E-03
4	GO:0005771: multivesicular body	1.74E-03
5	GO:0030127: COPII vesicle coat	1.74E-03
6	GO:0000815: ESCRT III complex	2.09E-03
7	GO:0045273: respiratory chain complex II	2.84E-03
8	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	2.84E-03
9	GO:0000502: proteasome complex	5.77E-03
10	GO:0005635: nuclear envelope	6.18E-03
11	GO:0005795: Golgi stack	7.13E-03
12	GO:0005834: heterotrimeric G-protein complex	7.27E-03
13	GO:0005773: vacuole	7.97E-03
14	GO:0005794: Golgi apparatus	9.02E-03
15	GO:0005839: proteasome core complex	9.46E-03
16	GO:0009506: plasmodesma	9.81E-03
17	GO:0015629: actin cytoskeleton	1.07E-02
18	GO:0009524: phragmoplast	1.09E-02
19	GO:0030136: clathrin-coated vesicle	1.20E-02
20	GO:0005618: cell wall	1.25E-02
21	GO:0016021: integral component of membrane	1.30E-02
22	GO:0005770: late endosome	1.34E-02
23	GO:0005788: endoplasmic reticulum lumen	2.10E-02
24	GO:0000325: plant-type vacuole	2.71E-02
25	GO:0005829: cytosol	2.74E-02
26	GO:0005774: vacuolar membrane	2.77E-02
27	GO:0005819: spindle	3.08E-02
28	GO:0031902: late endosome membrane	3.27E-02
29	GO:0005783: endoplasmic reticulum	3.61E-02
30	GO:0005737: cytoplasm	3.85E-02
31	GO:0031966: mitochondrial membrane	4.07E-02
32	GO:0043231: intracellular membrane-bounded organelle	4.44E-02
33	GO:0010008: endosome membrane	4.93E-02