co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G44110

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006858: extracellular transport	0.00E+00
2	GO:0036258: multivesicular body assembly	0.00E+00
3	GO:0048227: plasma membrane to endosome transport	0.00E+00
4	GO:0006482: protein demethylation	0.00E+00
5	GO:1900103: positive regulation of endoplasmic reticulum unfolded protein response	0.00E+00
6	GO:0006098: pentose-phosphate shunt	7.78E-05
7	GO:0046685: response to arsenic-containing substance	7.78E-05
8	GO:0080173: male-female gamete recognition during double fertilization	9.14E-05
9	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	9.14E-05
10	GO:0048455: stamen formation	9.14E-05
11	GO:0000266: mitochondrial fission	1.54E-04
12	GO:0051707: response to other organism	1.93E-04
13	GO:0019521: D-gluconate metabolic process	2.16E-04
14	GO:0019374: galactolipid metabolic process	2.16E-04
15	GO:0051788: response to misfolded protein	2.16E-04
16	GO:1902000: homogentisate catabolic process	2.16E-04
17	GO:0097054: L-glutamate biosynthetic process	2.16E-04
18	GO:0031648: protein destabilization	2.16E-04
19	GO:0071395: cellular response to jasmonic acid stimulus	2.16E-04
20	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	3.61E-04
21	GO:0006556: S-adenosylmethionine biosynthetic process	3.61E-04
22	GO:0048586: regulation of long-day photoperiodism, flowering	3.61E-04
23	GO:0009072: aromatic amino acid family metabolic process	3.61E-04
24	GO:0006511: ubiquitin-dependent protein catabolic process	4.26E-04
25	GO:0009399: nitrogen fixation	5.20E-04
26	GO:0006537: glutamate biosynthetic process	5.20E-04
27	GO:0070676: intralumenal vesicle formation	5.20E-04
28	GO:0001676: long-chain fatty acid metabolic process	5.20E-04
29	GO:1901000: regulation of response to salt stress	5.20E-04
30	GO:0010363: regulation of plant-type hypersensitive response	6.90E-04
31	GO:0042991: transcription factor import into nucleus	6.90E-04
32	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	6.90E-04
33	GO:0006542: glutamine biosynthetic process	6.90E-04
34	GO:0019676: ammonia assimilation cycle	6.90E-04
35	GO:0046283: anthocyanin-containing compound metabolic process	8.73E-04
36	GO:0006574: valine catabolic process	1.07E-03
37	GO:0043248: proteasome assembly	1.07E-03
38	GO:0009094: L-phenylalanine biosynthetic process	1.27E-03
39	GO:0010555: response to mannitol	1.27E-03
40	GO:2000067: regulation of root morphogenesis	1.27E-03
41	GO:0015031: protein transport	1.31E-03
42	GO:0010043: response to zinc ion	1.46E-03
43	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.49E-03
44	GO:0015937: coenzyme A biosynthetic process	1.49E-03
45	GO:0006401: RNA catabolic process	1.49E-03
46	GO:0009610: response to symbiotic fungus	1.49E-03
47	GO:0048528: post-embryonic root development	1.49E-03
48	GO:0071446: cellular response to salicylic acid stimulus	1.49E-03
49	GO:0016559: peroxisome fission	1.72E-03
50	GO:0006644: phospholipid metabolic process	1.72E-03
51	GO:0046686: response to cadmium ion	1.87E-03
52	GO:0006631: fatty acid metabolic process	1.89E-03
53	GO:0048366: leaf development	1.91E-03
54	GO:0007186: G-protein coupled receptor signaling pathway	1.96E-03
55	GO:0009651: response to salt stress	2.02E-03
56	GO:0009744: response to sucrose	2.05E-03
57	GO:0090305: nucleic acid phosphodiester bond hydrolysis	2.21E-03
58	GO:0006855: drug transmembrane transport	2.38E-03
59	GO:0016571: histone methylation	2.48E-03
60	GO:0009846: pollen germination	2.56E-03
61	GO:0051555: flavonol biosynthetic process	2.75E-03
62	GO:0006896: Golgi to vacuole transport	2.75E-03
63	GO:0051603: proteolysis involved in cellular protein catabolic process	2.84E-03
64	GO:0009682: induced systemic resistance	3.03E-03
65	GO:0009750: response to fructose	3.03E-03
66	GO:0030148: sphingolipid biosynthetic process	3.03E-03
67	GO:0008152: metabolic process	3.77E-03
68	GO:0007034: vacuolar transport	3.93E-03
69	GO:0016310: phosphorylation	4.14E-03
70	GO:0010053: root epidermal cell differentiation	4.26E-03
71	GO:0016575: histone deacetylation	5.27E-03
72	GO:0061077: chaperone-mediated protein folding	5.62E-03
73	GO:0006730: one-carbon metabolic process	5.98E-03
74	GO:0009814: defense response, incompatible interaction	5.98E-03
75	GO:0007005: mitochondrion organization	5.98E-03
76	GO:0031348: negative regulation of defense response	5.98E-03
77	GO:0009693: ethylene biosynthetic process	6.35E-03
78	GO:0019722: calcium-mediated signaling	6.73E-03
79	GO:0009306: protein secretion	6.73E-03
80	GO:0070417: cellular response to cold	7.11E-03
81	GO:0010118: stomatal movement	7.51E-03
82	GO:0042631: cellular response to water deprivation	7.51E-03
83	GO:0071472: cellular response to salt stress	7.91E-03
84	GO:0010197: polar nucleus fusion	7.91E-03
85	GO:0009617: response to bacterium	8.00E-03
86	GO:0048825: cotyledon development	8.74E-03
87	GO:0009749: response to glucose	8.74E-03
88	GO:0055072: iron ion homeostasis	8.74E-03
89	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	9.16E-03
90	GO:0010193: response to ozone	9.16E-03
91	GO:0007264: small GTPase mediated signal transduction	9.60E-03
92	GO:0030163: protein catabolic process	1.00E-02
93	GO:0071281: cellular response to iron ion	1.00E-02
94	GO:1901657: glycosyl compound metabolic process	1.00E-02
95	GO:0006904: vesicle docking involved in exocytosis	1.09E-02
96	GO:0016579: protein deubiquitination	1.14E-02
97	GO:0010029: regulation of seed germination	1.23E-02
98	GO:0009816: defense response to bacterium, incompatible interaction	1.23E-02
99	GO:0006974: cellular response to DNA damage stimulus	1.28E-02
100	GO:0042128: nitrate assimilation	1.28E-02
101	GO:0010200: response to chitin	1.33E-02
102	GO:0006888: ER to Golgi vesicle-mediated transport	1.33E-02
103	GO:0006950: response to stress	1.33E-02
104	GO:0048481: plant ovule development	1.43E-02
105	GO:0048767: root hair elongation	1.48E-02
106	GO:0009407: toxin catabolic process	1.54E-02
107	GO:0016042: lipid catabolic process	1.85E-02
108	GO:0009408: response to heat	1.91E-02
109	GO:0006897: endocytosis	1.91E-02
110	GO:0008283: cell proliferation	2.03E-02
111	GO:0042538: hyperosmotic salinity response	2.38E-02
112	GO:0009809: lignin biosynthetic process	2.51E-02
113	GO:0009736: cytokinin-activated signaling pathway	2.51E-02
114	GO:0048367: shoot system development	2.89E-02
115	GO:0006468: protein phosphorylation	2.98E-02
116	GO:0009908: flower development	3.06E-02
117	GO:0009624: response to nematode	3.22E-02
118	GO:0009555: pollen development	3.38E-02
119	GO:0009611: response to wounding	3.46E-02
120	GO:0000398: mRNA splicing, via spliceosome	3.57E-02
121	GO:0051301: cell division	3.68E-02
122	GO:0007275: multicellular organism development	3.93E-02
123	GO:0009790: embryo development	4.22E-02
124	GO:0055085: transmembrane transport	4.28E-02
125	GO:0009737: response to abscisic acid	4.33E-02
126	GO:0006633: fatty acid biosynthetic process	4.45E-02
127	GO:0040008: regulation of growth	4.60E-02
128	GO:0010150: leaf senescence	4.75E-02
129	GO:0006351: transcription, DNA-templated	4.82E-02
130	GO:0009451: RNA modification	4.83E-02
131	GO:0006952: defense response	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0015930: glutamate synthase activity	0.00E+00
2	GO:0051723: protein methylesterase activity	0.00E+00
3	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
4	GO:0005515: protein binding	4.17E-06
5	GO:0031593: polyubiquitin binding	1.95E-05
6	GO:0102391: decanoate--CoA ligase activity	2.78E-05
7	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.78E-05
8	GO:0004467: long-chain fatty acid-CoA ligase activity	3.77E-05
9	GO:0047893: flavonol 3-O-glucosyltransferase activity	4.94E-05
10	GO:0016041: glutamate synthase (ferredoxin) activity	9.14E-05
11	GO:0005524: ATP binding	9.31E-05
12	GO:0004713: protein tyrosine kinase activity	1.13E-04
13	GO:0004839: ubiquitin activating enzyme activity	2.16E-04
14	GO:0045140: inositol phosphoceramide synthase activity	2.16E-04
15	GO:0008517: folic acid transporter activity	2.16E-04
16	GO:0004594: pantothenate kinase activity	2.16E-04
17	GO:0035251: UDP-glucosyltransferase activity	3.47E-04
18	GO:0004298: threonine-type endopeptidase activity	3.47E-04
19	GO:0031683: G-protein beta/gamma-subunit complex binding	3.61E-04
20	GO:0016805: dipeptidase activity	3.61E-04
21	GO:0004478: methionine adenosyltransferase activity	3.61E-04
22	GO:0001664: G-protein coupled receptor binding	3.61E-04
23	GO:0005093: Rab GDP-dissociation inhibitor activity	3.61E-04
24	GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity	3.61E-04
25	GO:0001653: peptide receptor activity	5.20E-04
26	GO:0047769: arogenate dehydratase activity	6.90E-04
27	GO:0004664: prephenate dehydratase activity	6.90E-04
28	GO:0008641: small protein activating enzyme activity	8.73E-04
29	GO:0051538: 3 iron, 4 sulfur cluster binding	8.73E-04
30	GO:0004356: glutamate-ammonia ligase activity	8.73E-04
31	GO:0008194: UDP-glycosyltransferase activity	1.04E-03
32	GO:0047714: galactolipase activity	1.07E-03
33	GO:0004620: phospholipase activity	1.49E-03
34	GO:0004143: diacylglycerol kinase activity	1.49E-03
35	GO:0008235: metalloexopeptidase activity	1.49E-03
36	GO:0102425: myricetin 3-O-glucosyltransferase activity	1.49E-03
37	GO:0102360: daphnetin 3-O-glucosyltransferase activity	1.49E-03
38	GO:0052747: sinapyl alcohol dehydrogenase activity	1.72E-03
39	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.74E-03
40	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	1.96E-03
41	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	1.96E-03
42	GO:0003951: NAD+ kinase activity	1.96E-03
43	GO:0045309: protein phosphorylated amino acid binding	2.48E-03
44	GO:0047617: acyl-CoA hydrolase activity	2.48E-03
45	GO:0019904: protein domain specific binding	3.03E-03
46	GO:0004177: aminopeptidase activity	3.03E-03
47	GO:0008559: xenobiotic-transporting ATPase activity	3.03E-03
48	GO:0016787: hydrolase activity	3.26E-03
49	GO:0045551: cinnamyl-alcohol dehydrogenase activity	3.32E-03
50	GO:0003924: GTPase activity	3.33E-03
51	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.56E-03
52	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.56E-03
53	GO:0016758: transferase activity, transferring hexosyl groups	4.73E-03
54	GO:0004407: histone deacetylase activity	4.92E-03
55	GO:0043130: ubiquitin binding	4.92E-03
56	GO:0043424: protein histidine kinase binding	5.27E-03
57	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	5.62E-03
58	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	8.51E-03
59	GO:0004843: thiol-dependent ubiquitin-specific protease activity	9.16E-03
60	GO:0004518: nuclease activity	9.60E-03
61	GO:0016597: amino acid binding	1.14E-02
62	GO:0008233: peptidase activity	1.27E-02
63	GO:0005525: GTP binding	1.30E-02
64	GO:0102483: scopolin beta-glucosidase activity	1.33E-02
65	GO:0004806: triglyceride lipase activity	1.33E-02
66	GO:0004674: protein serine/threonine kinase activity	1.39E-02
67	GO:0015238: drug transmembrane transporter activity	1.48E-02
68	GO:0005096: GTPase activator activity	1.48E-02
69	GO:0004222: metalloendopeptidase activity	1.54E-02
70	GO:0030145: manganese ion binding	1.59E-02
71	GO:0004871: signal transducer activity	1.62E-02
72	GO:0008422: beta-glucosidase activity	1.80E-02
73	GO:0005215: transporter activity	1.92E-02
74	GO:0004364: glutathione transferase activity	1.97E-02
75	GO:0004519: endonuclease activity	2.07E-02
76	GO:0043621: protein self-association	2.14E-02
77	GO:0035091: phosphatidylinositol binding	2.14E-02
78	GO:0051287: NAD binding	2.32E-02
79	GO:0016491: oxidoreductase activity	2.39E-02
80	GO:0003729: mRNA binding	2.78E-02
81	GO:0016887: ATPase activity	2.95E-02
82	GO:0051082: unfolded protein binding	3.22E-02
83	GO:0000166: nucleotide binding	3.38E-02
84	GO:0004252: serine-type endopeptidase activity	4.07E-02
85	GO:0008565: protein transporter activity	4.30E-02
86	GO:0015297: antiporter activity	4.60E-02
87	GO:0008017: microtubule binding	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005829: cytosol	3.94E-09
3	GO:0000502: proteasome complex	2.89E-04
4	GO:0005839: proteasome core complex	3.47E-04
5	GO:0030139: endocytic vesicle	3.61E-04
6	GO:0005737: cytoplasm	8.60E-04
7	GO:0000813: ESCRT I complex	8.73E-04
8	GO:0005886: plasma membrane	1.01E-03
9	GO:0030127: COPII vesicle coat	1.07E-03
10	GO:0005777: peroxisome	1.64E-03
11	GO:0031902: late endosome membrane	1.89E-03
12	GO:0008540: proteasome regulatory particle, base subcomplex	2.48E-03
13	GO:0005635: nuclear envelope	2.94E-03
14	GO:0016602: CCAAT-binding factor complex	3.63E-03
15	GO:0005578: proteinaceous extracellular matrix	3.63E-03
16	GO:0031012: extracellular matrix	3.63E-03
17	GO:0005773: vacuole	4.98E-03
18	GO:0009524: phragmoplast	5.12E-03
19	GO:0005741: mitochondrial outer membrane	5.62E-03
20	GO:0030136: clathrin-coated vesicle	7.11E-03
21	GO:0005774: vacuolar membrane	7.54E-03
22	GO:0005618: cell wall	9.53E-03
23	GO:0005778: peroxisomal membrane	1.09E-02
24	GO:0000932: P-body	1.19E-02
25	GO:0000325: plant-type vacuole	1.59E-02
26	GO:0005819: spindle	1.80E-02
27	GO:0043231: intracellular membrane-bounded organelle	2.10E-02
28	GO:0009570: chloroplast stroma	2.26E-02
29	GO:0009506: plasmodesma	2.87E-02
30	GO:0005834: heterotrimeric G-protein complex	2.96E-02
31	GO:0005794: Golgi apparatus	4.98E-02