co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G44010

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072321: chaperone-mediated protein transport	0.00E+00
2	GO:0000494: box C/D snoRNA 3'-end processing	0.00E+00
3	GO:0071731: response to nitric oxide	0.00E+00
4	GO:1990258: histone glutamine methylation	0.00E+00
5	GO:0080180: 2-methylguanosine metabolic process	0.00E+00
6	GO:0006412: translation	7.09E-23
7	GO:0042254: ribosome biogenesis	7.40E-13
8	GO:0006626: protein targeting to mitochondrion	4.41E-09
9	GO:0007005: mitochondrion organization	2.94E-06
10	GO:0031167: rRNA methylation	4.26E-06
11	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	1.32E-05
12	GO:0001510: RNA methylation	2.26E-05
13	GO:0000027: ribosomal large subunit assembly	1.14E-04
14	GO:0006123: mitochondrial electron transport, cytochrome c to oxygen	1.17E-04
15	GO:0045039: protein import into mitochondrial inner membrane	2.00E-04
16	GO:1902626: assembly of large subunit precursor of preribosome	2.00E-04
17	GO:0002181: cytoplasmic translation	2.00E-04
18	GO:0008033: tRNA processing	2.22E-04
19	GO:0070301: cellular response to hydrogen peroxide	2.94E-04
20	GO:0051085: chaperone mediated protein folding requiring cofactor	2.94E-04
21	GO:0006241: CTP biosynthetic process	2.94E-04
22	GO:0006165: nucleoside diphosphate phosphorylation	2.94E-04
23	GO:0006228: UTP biosynthetic process	2.94E-04
24	GO:0006986: response to unfolded protein	2.94E-04
25	GO:0006183: GTP biosynthetic process	3.94E-04
26	GO:0046686: response to cadmium ion	3.98E-04
27	GO:0071493: cellular response to UV-B	5.00E-04
28	GO:0010043: response to zinc ion	6.43E-04
29	GO:0016444: somatic cell DNA recombination	7.31E-04
30	GO:0006400: tRNA modification	8.54E-04
31	GO:0008283: cell proliferation	8.94E-04
32	GO:0042255: ribosome assembly	9.81E-04
33	GO:0022900: electron transport chain	1.11E-03
34	GO:0006364: rRNA processing	1.18E-03
35	GO:0000387: spliceosomal snRNP assembly	1.40E-03
36	GO:0015031: protein transport	1.48E-03
37	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	1.86E-03
38	GO:0006820: anion transport	1.86E-03
39	GO:0048467: gynoecium development	2.20E-03
40	GO:0006413: translational initiation	2.66E-03
41	GO:0030150: protein import into mitochondrial matrix	2.74E-03
42	GO:0006334: nucleosome assembly	3.12E-03
43	GO:0009793: embryo development ending in seed dormancy	3.68E-03
44	GO:0000413: protein peptidyl-prolyl isomerization	4.15E-03
45	GO:0032502: developmental process	5.28E-03
46	GO:0009651: response to salt stress	6.46E-03
47	GO:0016049: cell growth	7.54E-03
48	GO:0006811: ion transport	8.37E-03
49	GO:0048527: lateral root development	8.65E-03
50	GO:0000724: double-strand break repair via homologous recombination	8.93E-03
51	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.26E-02
52	GO:0009735: response to cytokinin	1.30E-02
53	GO:0006096: glycolytic process	1.53E-02
54	GO:0006457: protein folding	1.84E-02
55	GO:0000398: mRNA splicing, via spliceosome	1.93E-02
56	GO:0006414: translational elongation	2.12E-02
57	GO:0009409: response to cold	3.90E-02
58	GO:0009723: response to ethylene	3.90E-02

Rank	GO Term	Adjusted P value
1	GO:1990259: histone-glutamine methyltransferase activity	0.00E+00
2	GO:0016018: cyclosporin A binding	0.00E+00
3	GO:0003735: structural constituent of ribosome	1.45E-25
4	GO:0003729: mRNA binding	1.03E-09
5	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.95E-07
6	GO:0008649: rRNA methyltransferase activity	5.35E-07
7	GO:0008121: ubiquinol-cytochrome-c reductase activity	1.32E-05
8	GO:0030515: snoRNA binding	1.32E-05
9	GO:0005507: copper ion binding	8.25E-05
10	GO:0003723: RNA binding	1.10E-04
11	GO:0004634: phosphopyruvate hydratase activity	1.17E-04
12	GO:0004550: nucleoside diphosphate kinase activity	2.94E-04
13	GO:0003746: translation elongation factor activity	7.02E-04
14	GO:0015288: porin activity	9.81E-04
15	GO:0008308: voltage-gated anion channel activity	1.11E-03
16	GO:0001055: RNA polymerase II activity	1.40E-03
17	GO:0001054: RNA polymerase I activity	1.70E-03
18	GO:0001056: RNA polymerase III activity	1.86E-03
19	GO:0015266: protein channel activity	2.03E-03
20	GO:0005515: protein binding	2.25E-03
21	GO:0008565: protein transporter activity	2.47E-03
22	GO:0051087: chaperone binding	2.93E-03
23	GO:0003743: translation initiation factor activity	3.32E-03
24	GO:0042393: histone binding	1.01E-02
25	GO:0005198: structural molecule activity	1.20E-02
26	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.23E-02
27	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.36E-02
28	GO:0046872: metal ion binding	1.41E-02
29	GO:0051082: unfolded protein binding	1.75E-02
30	GO:0008168: methyltransferase activity	3.42E-02
31	GO:0000287: magnesium ion binding	3.47E-02

Rank	GO Term	Adjusted P value
1	GO:0043186: P granule	0.00E+00
2	GO:0042719: mitochondrial intermembrane space protein transporter complex	0.00E+00
3	GO:0022625: cytosolic large ribosomal subunit	1.84E-23
4	GO:0005840: ribosome	4.62E-23
5	GO:0005730: nucleolus	1.64E-16
6	GO:0022626: cytosolic ribosome	2.08E-15
7	GO:0022627: cytosolic small ribosomal subunit	1.90E-11
8	GO:0005829: cytosol	1.82E-09
9	GO:0005758: mitochondrial intermembrane space	1.33E-08
10	GO:0005737: cytoplasm	3.13E-08
11	GO:0009506: plasmodesma	3.00E-06
12	GO:0005773: vacuole	4.22E-06
13	GO:0031428: box C/D snoRNP complex	6.58E-06
14	GO:0005774: vacuolar membrane	8.02E-06
15	GO:0005742: mitochondrial outer membrane translocase complex	2.26E-05
16	GO:0015934: large ribosomal subunit	3.18E-05
17	GO:0015030: Cajal body	3.50E-05
18	GO:0032040: small-subunit processome	5.92E-05
19	GO:0005750: mitochondrial respiratory chain complex III	7.90E-05
20	GO:0000015: phosphopyruvate hydratase complex	1.17E-04
21	GO:0005743: mitochondrial inner membrane	1.21E-04
22	GO:0005741: mitochondrial outer membrane	1.42E-04
23	GO:0034719: SMN-Sm protein complex	2.00E-04
24	GO:0016020: membrane	2.06E-04
25	GO:0005682: U5 snRNP	3.94E-04
26	GO:0005687: U4 snRNP	5.00E-04
27	GO:0097526: spliceosomal tri-snRNP complex	5.00E-04
28	GO:0005689: U12-type spliceosomal complex	7.31E-04
29	GO:0071004: U2-type prespliceosome	9.81E-04
30	GO:0046930: pore complex	1.11E-03
31	GO:0005736: DNA-directed RNA polymerase I complex	1.25E-03
32	GO:0005685: U1 snRNP	1.25E-03
33	GO:0005666: DNA-directed RNA polymerase III complex	1.40E-03
34	GO:0071011: precatalytic spliceosome	1.40E-03
35	GO:0000418: DNA-directed RNA polymerase IV complex	1.55E-03
36	GO:0005740: mitochondrial envelope	1.55E-03
37	GO:0005686: U2 snRNP	1.55E-03
38	GO:0005886: plasma membrane	1.66E-03
39	GO:0071013: catalytic step 2 spliceosome	1.70E-03
40	GO:0005665: DNA-directed RNA polymerase II, core complex	1.86E-03
41	GO:0019013: viral nucleocapsid	2.03E-03
42	GO:0070469: respiratory chain	2.93E-03
43	GO:0016592: mediator complex	5.28E-03
44	GO:0005681: spliceosomal complex	1.53E-02
45	GO:0005747: mitochondrial respiratory chain complex I	1.57E-02
46	GO:0005739: mitochondrion	1.67E-02
47	GO:0005732: small nucleolar ribonucleoprotein complex	1.86E-02
48	GO:0005759: mitochondrial matrix	2.41E-02
49	GO:0005622: intracellular	2.53E-02
50	GO:0048046: apoplast	2.87E-02
51	GO:0009507: chloroplast	3.14E-02