co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G43720

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0007638: mechanosensory behavior	0.00E+00
2	GO:0070272: proton-transporting ATP synthase complex biogenesis	0.00E+00
3	GO:0046322: negative regulation of fatty acid oxidation	0.00E+00
4	GO:0032212: positive regulation of telomere maintenance via telomerase	0.00E+00
5	GO:0042493: response to drug	0.00E+00
6	GO:0032206: positive regulation of telomere maintenance	0.00E+00
7	GO:1905499: trichome papilla formation	0.00E+00
8	GO:0006437: tyrosyl-tRNA aminoacylation	0.00E+00
9	GO:0071555: cell wall organization	5.84E-07
10	GO:0010207: photosystem II assembly	1.94E-06
11	GO:0010411: xyloglucan metabolic process	4.67E-06
12	GO:0010196: nonphotochemical quenching	5.40E-06
13	GO:0090391: granum assembly	1.50E-05
14	GO:0042546: cell wall biogenesis	2.29E-05
15	GO:0009828: plant-type cell wall loosening	4.25E-05
16	GO:0015976: carbon utilization	6.01E-05
17	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.95E-04
18	GO:1902458: positive regulation of stomatal opening	3.04E-04
19	GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway	3.04E-04
20	GO:0019510: S-adenosylhomocysteine catabolic process	3.04E-04
21	GO:0060627: regulation of vesicle-mediated transport	3.04E-04
22	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	3.04E-04
23	GO:0042759: long-chain fatty acid biosynthetic process	3.04E-04
24	GO:0043686: co-translational protein modification	3.04E-04
25	GO:0006869: lipid transport	3.33E-04
26	GO:0009664: plant-type cell wall organization	3.40E-04
27	GO:0009826: unidimensional cell growth	5.83E-04
28	GO:0006949: syncytium formation	6.31E-04
29	GO:0010027: thylakoid membrane organization	6.42E-04
30	GO:1903426: regulation of reactive oxygen species biosynthetic process	6.66E-04
31	GO:0043039: tRNA aminoacylation	6.66E-04
32	GO:0010198: synergid death	6.66E-04
33	GO:0033353: S-adenosylmethionine cycle	6.66E-04
34	GO:0006065: UDP-glucuronate biosynthetic process	1.08E-03
35	GO:0090506: axillary shoot meristem initiation	1.08E-03
36	GO:0046168: glycerol-3-phosphate catabolic process	1.08E-03
37	GO:1901562: response to paraquat	1.08E-03
38	GO:0006633: fatty acid biosynthetic process	1.30E-03
39	GO:0010025: wax biosynthetic process	1.31E-03
40	GO:0007231: osmosensory signaling pathway	1.55E-03
41	GO:0006072: glycerol-3-phosphate metabolic process	1.55E-03
42	GO:0051016: barbed-end actin filament capping	1.55E-03
43	GO:0009650: UV protection	1.55E-03
44	GO:0010306: rhamnogalacturonan II biosynthetic process	1.55E-03
45	GO:0010731: protein glutathionylation	1.55E-03
46	GO:0050482: arachidonic acid secretion	1.55E-03
47	GO:0009413: response to flooding	1.55E-03
48	GO:0007017: microtubule-based process	1.60E-03
49	GO:0016042: lipid catabolic process	1.71E-03
50	GO:0009765: photosynthesis, light harvesting	2.07E-03
51	GO:0006085: acetyl-CoA biosynthetic process	2.07E-03
52	GO:0006183: GTP biosynthetic process	2.07E-03
53	GO:2000122: negative regulation of stomatal complex development	2.07E-03
54	GO:0033500: carbohydrate homeostasis	2.07E-03
55	GO:0010037: response to carbon dioxide	2.07E-03
56	GO:0009956: radial pattern formation	2.07E-03
57	GO:0019722: calcium-mediated signaling	2.28E-03
58	GO:0016123: xanthophyll biosynthetic process	2.65E-03
59	GO:0006665: sphingolipid metabolic process	2.65E-03
60	GO:0048359: mucilage metabolic process involved in seed coat development	2.65E-03
61	GO:0016120: carotene biosynthetic process	2.65E-03
62	GO:0045038: protein import into chloroplast thylakoid membrane	2.65E-03
63	GO:0031365: N-terminal protein amino acid modification	2.65E-03
64	GO:0042335: cuticle development	2.67E-03
65	GO:0000413: protein peptidyl-prolyl isomerization	2.67E-03
66	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	3.27E-03
67	GO:0006014: D-ribose metabolic process	3.27E-03
68	GO:0010583: response to cyclopentenone	3.79E-03
69	GO:0010555: response to mannitol	3.93E-03
70	GO:0071470: cellular response to osmotic stress	3.93E-03
71	GO:0010067: procambium histogenesis	3.93E-03
72	GO:0009612: response to mechanical stimulus	3.93E-03
73	GO:0009554: megasporogenesis	3.93E-03
74	GO:0005975: carbohydrate metabolic process	4.17E-03
75	GO:0007267: cell-cell signaling	4.56E-03
76	GO:0009645: response to low light intensity stimulus	4.64E-03
77	GO:0006644: phospholipid metabolic process	5.39E-03
78	GO:0009642: response to light intensity	5.39E-03
79	GO:2000070: regulation of response to water deprivation	5.39E-03
80	GO:0045010: actin nucleation	5.39E-03
81	GO:0042128: nitrate assimilation	5.72E-03
82	GO:0015996: chlorophyll catabolic process	6.18E-03
83	GO:0007186: G-protein coupled receptor signaling pathway	6.18E-03
84	GO:0015780: nucleotide-sugar transport	7.01E-03
85	GO:0006783: heme biosynthetic process	7.01E-03
86	GO:0006629: lipid metabolic process	7.34E-03
87	GO:0045490: pectin catabolic process	7.61E-03
88	GO:0006779: porphyrin-containing compound biosynthetic process	7.87E-03
89	GO:0000723: telomere maintenance	7.87E-03
90	GO:0042761: very long-chain fatty acid biosynthetic process	7.87E-03
91	GO:0016573: histone acetylation	7.87E-03
92	GO:0016051: carbohydrate biosynthetic process	8.49E-03
93	GO:0006782: protoporphyrinogen IX biosynthetic process	8.77E-03
94	GO:0009870: defense response signaling pathway, resistance gene-dependent	8.77E-03
95	GO:0010015: root morphogenesis	9.71E-03
96	GO:0006816: calcium ion transport	9.71E-03
97	GO:0045037: protein import into chloroplast stroma	1.07E-02
98	GO:0009725: response to hormone	1.17E-02
99	GO:0030036: actin cytoskeleton organization	1.17E-02
100	GO:0050826: response to freezing	1.17E-02
101	GO:0009933: meristem structural organization	1.27E-02
102	GO:0010223: secondary shoot formation	1.27E-02
103	GO:0009969: xyloglucan biosynthetic process	1.38E-02
104	GO:0042538: hyperosmotic salinity response	1.38E-02
105	GO:0010167: response to nitrate	1.38E-02
106	GO:0070588: calcium ion transmembrane transport	1.38E-02
107	GO:0019344: cysteine biosynthetic process	1.60E-02
108	GO:0006338: chromatin remodeling	1.60E-02
109	GO:0051017: actin filament bundle assembly	1.60E-02
110	GO:0019953: sexual reproduction	1.72E-02
111	GO:0006418: tRNA aminoacylation for protein translation	1.72E-02
112	GO:0010431: seed maturation	1.84E-02
113	GO:0016998: cell wall macromolecule catabolic process	1.84E-02
114	GO:0006508: proteolysis	1.87E-02
115	GO:0030245: cellulose catabolic process	1.96E-02
116	GO:0006730: one-carbon metabolic process	1.96E-02
117	GO:0031348: negative regulation of defense response	1.96E-02
118	GO:0009294: DNA mediated transformation	2.09E-02
119	GO:0009411: response to UV	2.09E-02
120	GO:0001944: vasculature development	2.09E-02
121	GO:0010089: xylem development	2.22E-02
122	GO:0010091: trichome branching	2.22E-02
123	GO:0016117: carotenoid biosynthetic process	2.35E-02
124	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.35E-02
125	GO:0080022: primary root development	2.48E-02
126	GO:0010087: phloem or xylem histogenesis	2.48E-02
127	GO:0010305: leaf vascular tissue pattern formation	2.62E-02
128	GO:0010182: sugar mediated signaling pathway	2.62E-02
129	GO:0048868: pollen tube development	2.62E-02
130	GO:0019252: starch biosynthetic process	2.90E-02
131	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	3.04E-02
132	GO:0071554: cell wall organization or biogenesis	3.04E-02
133	GO:1901657: glycosyl compound metabolic process	3.33E-02
134	GO:0051607: defense response to virus	3.79E-02
135	GO:0009739: response to gibberellin	4.08E-02
136	GO:0007166: cell surface receptor signaling pathway	4.17E-02
137	GO:0009627: systemic acquired resistance	4.27E-02
138	GO:0015995: chlorophyll biosynthetic process	4.44E-02
139	GO:0016311: dephosphorylation	4.60E-02
140	GO:0009414: response to water deprivation	4.73E-02
141	GO:0009817: defense response to fungus, incompatible interaction	4.77E-02
142	GO:0009813: flavonoid biosynthetic process	4.94E-02
143	GO:0006979: response to oxidative stress	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity	0.00E+00
2	GO:0047889: ferredoxin-nitrate reductase activity	0.00E+00
3	GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity	0.00E+00
4	GO:0016631: enoyl-[acyl-carrier-protein] reductase activity	0.00E+00
5	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
6	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
7	GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity	0.00E+00
8	GO:0048307: ferredoxin-nitrite reductase activity	0.00E+00
9	GO:0050421: nitrite reductase (NO-forming) activity	0.00E+00
10	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
11	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.11E-06
12	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.67E-06
13	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.13E-05
14	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	3.35E-05
15	GO:0051753: mannan synthase activity	1.88E-04
16	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.02E-04
17	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	3.04E-04
18	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	3.04E-04
19	GO:0030794: (S)-coclaurine-N-methyltransferase activity	3.04E-04
20	GO:0004560: alpha-L-fucosidase activity	3.04E-04
21	GO:0004013: adenosylhomocysteinase activity	3.04E-04
22	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	3.04E-04
23	GO:0004831: tyrosine-tRNA ligase activity	3.04E-04
24	GO:0042586: peptide deformylase activity	3.04E-04
25	GO:0009374: biotin binding	3.04E-04
26	GO:0004328: formamidase activity	3.04E-04
27	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	4.57E-04
28	GO:0003938: IMP dehydrogenase activity	6.66E-04
29	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	6.66E-04
30	GO:0008883: glutamyl-tRNA reductase activity	6.66E-04
31	GO:0008378: galactosyltransferase activity	8.31E-04
32	GO:0008289: lipid binding	8.32E-04
33	GO:0004089: carbonate dehydratase activity	9.40E-04
34	GO:0003979: UDP-glucose 6-dehydrogenase activity	1.08E-03
35	GO:0052689: carboxylic ester hydrolase activity	1.08E-03
36	GO:0005504: fatty acid binding	1.08E-03
37	GO:0045174: glutathione dehydrogenase (ascorbate) activity	1.08E-03
38	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	1.08E-03
39	GO:0004857: enzyme inhibitor activity	1.45E-03
40	GO:0005528: FK506 binding	1.45E-03
41	GO:0003878: ATP citrate synthase activity	1.55E-03
42	GO:0043047: single-stranded telomeric DNA binding	1.55E-03
43	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	1.55E-03
44	GO:0052793: pectin acetylesterase activity	2.07E-03
45	GO:0045430: chalcone isomerase activity	2.07E-03
46	GO:0030570: pectate lyase activity	2.10E-03
47	GO:0051287: NAD binding	2.11E-03
48	GO:0003989: acetyl-CoA carboxylase activity	2.65E-03
49	GO:0009922: fatty acid elongase activity	2.65E-03
50	GO:0004623: phospholipase A2 activity	2.65E-03
51	GO:0016788: hydrolase activity, acting on ester bonds	3.01E-03
52	GO:0080030: methyl indole-3-acetate esterase activity	3.27E-03
53	GO:0004629: phospholipase C activity	3.27E-03
54	GO:0051920: peroxiredoxin activity	3.93E-03
55	GO:0004747: ribokinase activity	3.93E-03
56	GO:0004435: phosphatidylinositol phospholipase C activity	3.93E-03
57	GO:0051015: actin filament binding	4.04E-03
58	GO:0005200: structural constituent of cytoskeleton	4.56E-03
59	GO:0042162: telomeric DNA binding	4.64E-03
60	GO:0043295: glutathione binding	4.64E-03
61	GO:0016209: antioxidant activity	5.39E-03
62	GO:0008865: fructokinase activity	5.39E-03
63	GO:0052747: sinapyl alcohol dehydrogenase activity	5.39E-03
64	GO:0004871: signal transducer activity	5.73E-03
65	GO:0015020: glucuronosyltransferase activity	8.77E-03
66	GO:0047372: acylglycerol lipase activity	9.71E-03
67	GO:0004364: glutathione transferase activity	1.05E-02
68	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.07E-02
69	GO:0005262: calcium channel activity	1.17E-02
70	GO:0045735: nutrient reservoir activity	1.75E-02
71	GO:0033612: receptor serine/threonine kinase binding	1.84E-02
72	GO:0030599: pectinesterase activity	1.99E-02
73	GO:0008810: cellulase activity	2.09E-02
74	GO:0008514: organic anion transmembrane transporter activity	2.22E-02
75	GO:0004812: aminoacyl-tRNA ligase activity	2.35E-02
76	GO:0005102: receptor binding	2.35E-02
77	GO:0003713: transcription coactivator activity	2.62E-02
78	GO:0016829: lyase activity	2.86E-02
79	GO:0004872: receptor activity	2.90E-02
80	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.40E-02
81	GO:0016722: oxidoreductase activity, oxidizing metal ions	3.64E-02
82	GO:0016413: O-acetyltransferase activity	3.79E-02
83	GO:0008375: acetylglucosaminyltransferase activity	4.27E-02
84	GO:0102483: scopolin beta-glucosidase activity	4.44E-02
85	GO:0008236: serine-type peptidase activity	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0005835: fatty acid synthase complex	0.00E+00
2	GO:0009515: granal stacked thylakoid	0.00E+00
3	GO:0048046: apoplast	4.78E-13
4	GO:0005618: cell wall	9.34E-12
5	GO:0009543: chloroplast thylakoid lumen	1.17E-10
6	GO:0005576: extracellular region	9.05E-10
7	GO:0031977: thylakoid lumen	1.12E-09
8	GO:0031225: anchored component of membrane	1.45E-09
9	GO:0009535: chloroplast thylakoid membrane	1.51E-07
10	GO:0009570: chloroplast stroma	1.87E-07
11	GO:0009579: thylakoid	3.45E-07
12	GO:0009507: chloroplast	1.05E-06
13	GO:0009505: plant-type cell wall	1.87E-06
14	GO:0046658: anchored component of plasma membrane	8.24E-06
15	GO:0005886: plasma membrane	7.25E-05
16	GO:0009534: chloroplast thylakoid	1.27E-04
17	GO:0009923: fatty acid elongase complex	3.04E-04
18	GO:0045298: tubulin complex	4.57E-04
19	GO:0005697: telomerase holoenzyme complex	6.66E-04
20	GO:0009528: plastid inner membrane	1.08E-03
21	GO:0009317: acetyl-CoA carboxylase complex	1.08E-03
22	GO:0009941: chloroplast envelope	1.28E-03
23	GO:0009346: citrate lyase complex	1.55E-03
24	GO:0009331: glycerol-3-phosphate dehydrogenase complex	1.55E-03
25	GO:0009527: plastid outer membrane	2.07E-03
26	GO:0016020: membrane	2.14E-03
27	GO:0009533: chloroplast stromal thylakoid	4.64E-03
28	GO:0000123: histone acetyltransferase complex	4.64E-03
29	GO:0000784: nuclear chromosome, telomeric region	6.18E-03
30	GO:0009506: plasmodesma	1.17E-02
31	GO:0043234: protein complex	1.49E-02
32	GO:0005875: microtubule associated complex	1.49E-02
33	GO:0009532: plastid stroma	1.84E-02
34	GO:0031410: cytoplasmic vesicle	1.96E-02
35	GO:0015629: actin cytoskeleton	2.09E-02
36	GO:0010319: stromule	3.64E-02
37	GO:0005615: extracellular space	4.08E-02
38	GO:0009707: chloroplast outer membrane	4.77E-02
39	GO:0000151: ubiquitin ligase complex	4.77E-02