GO Enrichment Analysis of Co-expressed Genes with
AT3G43610
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
| 2 | GO:0099131: ATP hydrolysis coupled ion transmembrane transport | 0.00E+00 |
| 3 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 4 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 5 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 6 | GO:0015995: chlorophyll biosynthetic process | 2.32E-05 |
| 7 | GO:0043266: regulation of potassium ion transport | 1.93E-04 |
| 8 | GO:0010480: microsporocyte differentiation | 1.93E-04 |
| 9 | GO:0031338: regulation of vesicle fusion | 1.93E-04 |
| 10 | GO:2000021: regulation of ion homeostasis | 1.93E-04 |
| 11 | GO:0010115: regulation of abscisic acid biosynthetic process | 4.33E-04 |
| 12 | GO:0045717: negative regulation of fatty acid biosynthetic process | 4.33E-04 |
| 13 | GO:0010270: photosystem II oxygen evolving complex assembly | 4.33E-04 |
| 14 | GO:0010020: chloroplast fission | 5.65E-04 |
| 15 | GO:0006518: peptide metabolic process | 7.06E-04 |
| 16 | GO:0090630: activation of GTPase activity | 7.06E-04 |
| 17 | GO:2001295: malonyl-CoA biosynthetic process | 7.06E-04 |
| 18 | GO:0009226: nucleotide-sugar biosynthetic process | 1.01E-03 |
| 19 | GO:0006424: glutamyl-tRNA aminoacylation | 1.01E-03 |
| 20 | GO:0043572: plastid fission | 1.01E-03 |
| 21 | GO:0055070: copper ion homeostasis | 1.01E-03 |
| 22 | GO:0016556: mRNA modification | 1.01E-03 |
| 23 | GO:0031122: cytoplasmic microtubule organization | 1.34E-03 |
| 24 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 1.34E-03 |
| 25 | GO:0010021: amylopectin biosynthetic process | 1.34E-03 |
| 26 | GO:1901601: strigolactone biosynthetic process | 1.34E-03 |
| 27 | GO:0000304: response to singlet oxygen | 1.70E-03 |
| 28 | GO:0032543: mitochondrial translation | 1.70E-03 |
| 29 | GO:0035434: copper ion transmembrane transport | 1.70E-03 |
| 30 | GO:0016123: xanthophyll biosynthetic process | 1.70E-03 |
| 31 | GO:0071554: cell wall organization or biogenesis | 1.85E-03 |
| 32 | GO:0006655: phosphatidylglycerol biosynthetic process | 2.10E-03 |
| 33 | GO:0010405: arabinogalactan protein metabolic process | 2.10E-03 |
| 34 | GO:0006751: glutathione catabolic process | 2.10E-03 |
| 35 | GO:0042549: photosystem II stabilization | 2.10E-03 |
| 36 | GO:0006828: manganese ion transport | 2.10E-03 |
| 37 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 2.10E-03 |
| 38 | GO:2000033: regulation of seed dormancy process | 2.52E-03 |
| 39 | GO:0016042: lipid catabolic process | 2.57E-03 |
| 40 | GO:0009395: phospholipid catabolic process | 2.96E-03 |
| 41 | GO:0048437: floral organ development | 2.96E-03 |
| 42 | GO:0005975: carbohydrate metabolic process | 3.32E-03 |
| 43 | GO:0016559: peroxisome fission | 3.43E-03 |
| 44 | GO:0008610: lipid biosynthetic process | 3.43E-03 |
| 45 | GO:0006526: arginine biosynthetic process | 3.93E-03 |
| 46 | GO:0032544: plastid translation | 3.93E-03 |
| 47 | GO:0009657: plastid organization | 3.93E-03 |
| 48 | GO:0010206: photosystem II repair | 4.44E-03 |
| 49 | GO:0006779: porphyrin-containing compound biosynthetic process | 4.99E-03 |
| 50 | GO:1900865: chloroplast RNA modification | 4.99E-03 |
| 51 | GO:0030001: metal ion transport | 5.01E-03 |
| 52 | GO:0010162: seed dormancy process | 5.55E-03 |
| 53 | GO:0006782: protoporphyrinogen IX biosynthetic process | 5.55E-03 |
| 54 | GO:0019538: protein metabolic process | 5.55E-03 |
| 55 | GO:0009658: chloroplast organization | 5.73E-03 |
| 56 | GO:1903507: negative regulation of nucleic acid-templated transcription | 6.13E-03 |
| 57 | GO:0018119: peptidyl-cysteine S-nitrosylation | 6.13E-03 |
| 58 | GO:0048229: gametophyte development | 6.13E-03 |
| 59 | GO:0046856: phosphatidylinositol dephosphorylation | 6.13E-03 |
| 60 | GO:0006816: calcium ion transport | 6.13E-03 |
| 61 | GO:0006415: translational termination | 6.13E-03 |
| 62 | GO:0012501: programmed cell death | 6.73E-03 |
| 63 | GO:0006820: anion transport | 6.73E-03 |
| 64 | GO:0016024: CDP-diacylglycerol biosynthetic process | 6.73E-03 |
| 65 | GO:0009718: anthocyanin-containing compound biosynthetic process | 7.36E-03 |
| 66 | GO:0010075: regulation of meristem growth | 7.36E-03 |
| 67 | GO:0009767: photosynthetic electron transport chain | 7.36E-03 |
| 68 | GO:0010102: lateral root morphogenesis | 7.36E-03 |
| 69 | GO:0010223: secondary shoot formation | 8.01E-03 |
| 70 | GO:0009934: regulation of meristem structural organization | 8.01E-03 |
| 71 | GO:0048768: root hair cell tip growth | 8.01E-03 |
| 72 | GO:0010143: cutin biosynthetic process | 8.01E-03 |
| 73 | GO:0007010: cytoskeleton organization | 1.01E-02 |
| 74 | GO:0042545: cell wall modification | 1.06E-02 |
| 75 | GO:0031408: oxylipin biosynthetic process | 1.15E-02 |
| 76 | GO:0016998: cell wall macromolecule catabolic process | 1.15E-02 |
| 77 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.23E-02 |
| 78 | GO:0009306: protein secretion | 1.39E-02 |
| 79 | GO:0008152: metabolic process | 1.40E-02 |
| 80 | GO:0016117: carotenoid biosynthetic process | 1.47E-02 |
| 81 | GO:0000413: protein peptidyl-prolyl isomerization | 1.55E-02 |
| 82 | GO:0048653: anther development | 1.55E-02 |
| 83 | GO:0006520: cellular amino acid metabolic process | 1.63E-02 |
| 84 | GO:0010182: sugar mediated signaling pathway | 1.63E-02 |
| 85 | GO:0006633: fatty acid biosynthetic process | 1.72E-02 |
| 86 | GO:0019252: starch biosynthetic process | 1.81E-02 |
| 87 | GO:0007623: circadian rhythm | 1.89E-02 |
| 88 | GO:0045490: pectin catabolic process | 1.89E-02 |
| 89 | GO:0080156: mitochondrial mRNA modification | 1.90E-02 |
| 90 | GO:1901657: glycosyl compound metabolic process | 2.08E-02 |
| 91 | GO:0030163: protein catabolic process | 2.08E-02 |
| 92 | GO:0010027: thylakoid membrane organization | 2.47E-02 |
| 93 | GO:0016126: sterol biosynthetic process | 2.47E-02 |
| 94 | GO:0016310: phosphorylation | 2.50E-02 |
| 95 | GO:0009627: systemic acquired resistance | 2.67E-02 |
| 96 | GO:0010411: xyloglucan metabolic process | 2.77E-02 |
| 97 | GO:0030244: cellulose biosynthetic process | 2.98E-02 |
| 98 | GO:0018298: protein-chromophore linkage | 2.98E-02 |
| 99 | GO:0009817: defense response to fungus, incompatible interaction | 2.98E-02 |
| 100 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.74E-02 |
| 101 | GO:0006839: mitochondrial transport | 3.87E-02 |
| 102 | GO:0015979: photosynthesis | 4.12E-02 |
| 103 | GO:0042546: cell wall biogenesis | 4.35E-02 |
| 104 | GO:0031347: regulation of defense response | 4.84E-02 |
| 105 | GO:0006812: cation transport | 4.96E-02 |
| 106 | GO:0009664: plant-type cell wall organization | 4.96E-02 |
| 107 | GO:0042538: hyperosmotic salinity response | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 2 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 3 | GO:0047513: 1,2-alpha-L-fucosidase activity | 0.00E+00 |
| 4 | GO:0004565: beta-galactosidase activity | 2.00E-05 |
| 5 | GO:0016788: hydrolase activity, acting on ester bonds | 2.16E-05 |
| 6 | GO:0004856: xylulokinase activity | 1.93E-04 |
| 7 | GO:0008568: microtubule-severing ATPase activity | 1.93E-04 |
| 8 | GO:0004163: diphosphomevalonate decarboxylase activity | 1.93E-04 |
| 9 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 1.93E-04 |
| 10 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 1.93E-04 |
| 11 | GO:0005227: calcium activated cation channel activity | 1.93E-04 |
| 12 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 1.93E-04 |
| 13 | GO:0003867: 4-aminobutyrate transaminase activity | 1.93E-04 |
| 14 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 1.93E-04 |
| 15 | GO:0003839: gamma-glutamylcyclotransferase activity | 4.33E-04 |
| 16 | GO:0033201: alpha-1,4-glucan synthase activity | 4.33E-04 |
| 17 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 4.33E-04 |
| 18 | GO:0004075: biotin carboxylase activity | 7.06E-04 |
| 19 | GO:0030267: glyoxylate reductase (NADP) activity | 7.06E-04 |
| 20 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 7.06E-04 |
| 21 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 7.06E-04 |
| 22 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 7.06E-04 |
| 23 | GO:0016531: copper chaperone activity | 7.06E-04 |
| 24 | GO:0004373: glycogen (starch) synthase activity | 7.06E-04 |
| 25 | GO:0019829: cation-transporting ATPase activity | 7.06E-04 |
| 26 | GO:0003913: DNA photolyase activity | 7.06E-04 |
| 27 | GO:0004176: ATP-dependent peptidase activity | 9.35E-04 |
| 28 | GO:0016149: translation release factor activity, codon specific | 1.01E-03 |
| 29 | GO:0043023: ribosomal large subunit binding | 1.01E-03 |
| 30 | GO:0001872: (1->3)-beta-D-glucan binding | 1.01E-03 |
| 31 | GO:0004445: inositol-polyphosphate 5-phosphatase activity | 1.01E-03 |
| 32 | GO:0016851: magnesium chelatase activity | 1.01E-03 |
| 33 | GO:0009011: starch synthase activity | 1.34E-03 |
| 34 | GO:0008526: phosphatidylinositol transporter activity | 1.34E-03 |
| 35 | GO:0003989: acetyl-CoA carboxylase activity | 1.70E-03 |
| 36 | GO:0008381: mechanically-gated ion channel activity | 1.70E-03 |
| 37 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.70E-03 |
| 38 | GO:0017137: Rab GTPase binding | 1.70E-03 |
| 39 | GO:0052689: carboxylic ester hydrolase activity | 1.73E-03 |
| 40 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 2.10E-03 |
| 41 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 2.10E-03 |
| 42 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.10E-03 |
| 43 | GO:0042578: phosphoric ester hydrolase activity | 2.10E-03 |
| 44 | GO:0008237: metallopeptidase activity | 2.38E-03 |
| 45 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.52E-03 |
| 46 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 2.52E-03 |
| 47 | GO:0051920: peroxiredoxin activity | 2.52E-03 |
| 48 | GO:0016413: O-acetyltransferase activity | 2.52E-03 |
| 49 | GO:0009881: photoreceptor activity | 2.96E-03 |
| 50 | GO:0016209: antioxidant activity | 3.43E-03 |
| 51 | GO:0004033: aldo-keto reductase (NADP) activity | 3.43E-03 |
| 52 | GO:0004222: metalloendopeptidase activity | 3.83E-03 |
| 53 | GO:0005375: copper ion transmembrane transporter activity | 3.93E-03 |
| 54 | GO:0003747: translation release factor activity | 4.44E-03 |
| 55 | GO:0047617: acyl-CoA hydrolase activity | 4.99E-03 |
| 56 | GO:0005384: manganese ion transmembrane transporter activity | 4.99E-03 |
| 57 | GO:0016887: ATPase activity | 5.23E-03 |
| 58 | GO:0047372: acylglycerol lipase activity | 6.13E-03 |
| 59 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.60E-03 |
| 60 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 6.73E-03 |
| 61 | GO:0015095: magnesium ion transmembrane transporter activity | 7.36E-03 |
| 62 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 7.36E-03 |
| 63 | GO:0045330: aspartyl esterase activity | 8.45E-03 |
| 64 | GO:0004190: aspartic-type endopeptidase activity | 8.67E-03 |
| 65 | GO:0005528: FK506 binding | 1.01E-02 |
| 66 | GO:0003714: transcription corepressor activity | 1.01E-02 |
| 67 | GO:0030599: pectinesterase activity | 1.02E-02 |
| 68 | GO:0008324: cation transmembrane transporter activity | 1.08E-02 |
| 69 | GO:0033612: receptor serine/threonine kinase binding | 1.15E-02 |
| 70 | GO:0004707: MAP kinase activity | 1.15E-02 |
| 71 | GO:0004519: endonuclease activity | 1.38E-02 |
| 72 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.40E-02 |
| 73 | GO:0003713: transcription coactivator activity | 1.63E-02 |
| 74 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.90E-02 |
| 75 | GO:0008017: microtubule binding | 1.98E-02 |
| 76 | GO:0016787: hydrolase activity | 1.99E-02 |
| 77 | GO:0016597: amino acid binding | 2.37E-02 |
| 78 | GO:0042802: identical protein binding | 2.40E-02 |
| 79 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.77E-02 |
| 80 | GO:0102483: scopolin beta-glucosidase activity | 2.77E-02 |
| 81 | GO:0030247: polysaccharide binding | 2.77E-02 |
| 82 | GO:0008236: serine-type peptidase activity | 2.88E-02 |
| 83 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.98E-02 |
| 84 | GO:0005096: GTPase activator activity | 3.09E-02 |
| 85 | GO:0016301: kinase activity | 3.47E-02 |
| 86 | GO:0008233: peptidase activity | 3.56E-02 |
| 87 | GO:0004497: monooxygenase activity | 3.62E-02 |
| 88 | GO:0003993: acid phosphatase activity | 3.64E-02 |
| 89 | GO:0030246: carbohydrate binding | 3.69E-02 |
| 90 | GO:0008422: beta-glucosidase activity | 3.76E-02 |
| 91 | GO:0051287: NAD binding | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.03E-15 |
| 2 | GO:0009570: chloroplast stroma | 4.50E-08 |
| 3 | GO:0009941: chloroplast envelope | 1.43E-06 |
| 4 | GO:0009536: plastid | 2.77E-05 |
| 5 | GO:0009534: chloroplast thylakoid | 1.06E-04 |
| 6 | GO:0009505: plant-type cell wall | 1.58E-04 |
| 7 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 1.93E-04 |
| 8 | GO:0031969: chloroplast membrane | 2.77E-04 |
| 9 | GO:0010007: magnesium chelatase complex | 7.06E-04 |
| 10 | GO:0009579: thylakoid | 2.11E-03 |
| 11 | GO:0009543: chloroplast thylakoid lumen | 2.19E-03 |
| 12 | GO:0009535: chloroplast thylakoid membrane | 2.27E-03 |
| 13 | GO:0009501: amyloplast | 3.43E-03 |
| 14 | GO:0031977: thylakoid lumen | 5.22E-03 |
| 15 | GO:0048046: apoplast | 6.51E-03 |
| 16 | GO:0000311: plastid large ribosomal subunit | 6.73E-03 |
| 17 | GO:0009508: plastid chromosome | 7.36E-03 |
| 18 | GO:0043234: protein complex | 9.35E-03 |
| 19 | GO:0010287: plastoglobule | 1.29E-02 |
| 20 | GO:0043231: intracellular membrane-bounded organelle | 1.40E-02 |
| 21 | GO:0005886: plasma membrane | 1.77E-02 |
| 22 | GO:0005618: cell wall | 2.14E-02 |
| 23 | GO:0009295: nucleoid | 2.27E-02 |
| 24 | GO:0009707: chloroplast outer membrane | 2.98E-02 |
| 25 | GO:0005777: peroxisome | 3.03E-02 |