co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G28040

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
2	GO:0002184: cytoplasmic translational termination	0.00E+00
3	GO:0090706: specification of plant organ position	0.00E+00
4	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
5	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
6	GO:0060416: response to growth hormone	0.00E+00
7	GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation	0.00E+00
8	GO:0000372: Group I intron splicing	0.00E+00
9	GO:1901698: response to nitrogen compound	0.00E+00
10	GO:2000121: regulation of removal of superoxide radicals	0.00E+00
11	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
12	GO:0006642: triglyceride mobilization	0.00E+00
13	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
14	GO:0006399: tRNA metabolic process	0.00E+00
15	GO:0015995: chlorophyll biosynthetic process	1.07E-08
16	GO:0006412: translation	1.22E-07
17	GO:0042254: ribosome biogenesis	1.03E-06
18	GO:0032544: plastid translation	1.74E-06
19	GO:0010115: regulation of abscisic acid biosynthetic process	1.71E-05
20	GO:0034755: iron ion transmembrane transport	1.71E-05
21	GO:0010027: thylakoid membrane organization	4.38E-05
22	GO:0009658: chloroplast organization	5.65E-05
23	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.21E-04
24	GO:0006782: protoporphyrinogen IX biosynthetic process	1.50E-04
25	GO:0032543: mitochondrial translation	3.06E-04
26	GO:0045038: protein import into chloroplast thylakoid membrane	3.06E-04
27	GO:0009735: response to cytokinin	3.30E-04
28	GO:0006655: phosphatidylglycerol biosynthetic process	4.27E-04
29	GO:0042372: phylloquinone biosynthetic process	5.67E-04
30	GO:0010450: inflorescence meristem growth	6.31E-04
31	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	6.31E-04
32	GO:0060627: regulation of vesicle-mediated transport	6.31E-04
33	GO:0070509: calcium ion import	6.31E-04
34	GO:0007263: nitric oxide mediated signal transduction	6.31E-04
35	GO:0043266: regulation of potassium ion transport	6.31E-04
36	GO:0010480: microsporocyte differentiation	6.31E-04
37	GO:0006723: cuticle hydrocarbon biosynthetic process	6.31E-04
38	GO:0042547: cell wall modification involved in multidimensional cell growth	6.31E-04
39	GO:0042371: vitamin K biosynthetic process	6.31E-04
40	GO:0006824: cobalt ion transport	6.31E-04
41	GO:2000021: regulation of ion homeostasis	6.31E-04
42	GO:0046166: glyceraldehyde-3-phosphate biosynthetic process	6.31E-04
43	GO:1902458: positive regulation of stomatal opening	6.31E-04
44	GO:0009793: embryo development ending in seed dormancy	7.34E-04
45	GO:0009306: protein secretion	8.99E-04
46	GO:0034220: ion transmembrane transport	1.10E-03
47	GO:0042335: cuticle development	1.10E-03
48	GO:0010206: photosystem II repair	1.31E-03
49	GO:0006783: heme biosynthetic process	1.31E-03
50	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.36E-03
51	GO:0010270: photosystem II oxygen evolving complex assembly	1.36E-03
52	GO:0010275: NAD(P)H dehydrogenase complex assembly	1.36E-03
53	GO:0006695: cholesterol biosynthetic process	1.36E-03
54	GO:0045717: negative regulation of fatty acid biosynthetic process	1.36E-03
55	GO:0080148: negative regulation of response to water deprivation	1.36E-03
56	GO:0009790: embryo development	1.48E-03
57	GO:0006779: porphyrin-containing compound biosynthetic process	1.55E-03
58	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.58E-03
59	GO:0006633: fatty acid biosynthetic process	1.69E-03
60	GO:0045490: pectin catabolic process	2.00E-03
61	GO:0032504: multicellular organism reproduction	2.24E-03
62	GO:0006954: inflammatory response	2.24E-03
63	GO:0019563: glycerol catabolic process	2.24E-03
64	GO:0043447: alkane biosynthetic process	2.24E-03
65	GO:0006013: mannose metabolic process	2.24E-03
66	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	2.24E-03
67	GO:0071705: nitrogen compound transport	2.24E-03
68	GO:0045165: cell fate commitment	2.24E-03
69	GO:0016024: CDP-diacylglycerol biosynthetic process	2.41E-03
70	GO:0051639: actin filament network formation	3.25E-03
71	GO:0034059: response to anoxia	3.25E-03
72	GO:0010731: protein glutathionylation	3.25E-03
73	GO:0006424: glutamyl-tRNA aminoacylation	3.25E-03
74	GO:0080170: hydrogen peroxide transmembrane transport	3.25E-03
75	GO:0046739: transport of virus in multicellular host	3.25E-03
76	GO:2001141: regulation of RNA biosynthetic process	3.25E-03
77	GO:0016556: mRNA modification	3.25E-03
78	GO:0006833: water transport	3.87E-03
79	GO:0010025: wax biosynthetic process	3.87E-03
80	GO:0005992: trehalose biosynthetic process	4.30E-03
81	GO:0051764: actin crosslink formation	4.38E-03
82	GO:0071249: cellular response to nitrate	4.38E-03
83	GO:0030104: water homeostasis	4.38E-03
84	GO:0006183: GTP biosynthetic process	4.38E-03
85	GO:0000919: cell plate assembly	4.38E-03
86	GO:0006749: glutathione metabolic process	4.38E-03
87	GO:0006808: regulation of nitrogen utilization	4.38E-03
88	GO:0006418: tRNA aminoacylation for protein translation	4.75E-03
89	GO:1902183: regulation of shoot apical meristem development	5.63E-03
90	GO:0016123: xanthophyll biosynthetic process	5.63E-03
91	GO:0010158: abaxial cell fate specification	5.63E-03
92	GO:0009247: glycolipid biosynthetic process	5.63E-03
93	GO:0034052: positive regulation of plant-type hypersensitive response	5.63E-03
94	GO:0010236: plastoquinone biosynthetic process	5.63E-03
95	GO:0009814: defense response, incompatible interaction	5.73E-03
96	GO:0010190: cytochrome b6f complex assembly	6.99E-03
97	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	6.99E-03
98	GO:0006828: manganese ion transport	6.99E-03
99	GO:0032973: amino acid export	6.99E-03
100	GO:0006561: proline biosynthetic process	6.99E-03
101	GO:0018258: protein O-linked glycosylation via hydroxyproline	6.99E-03
102	GO:0000741: karyogamy	6.99E-03
103	GO:0006354: DNA-templated transcription, elongation	6.99E-03
104	GO:0010405: arabinogalactan protein metabolic process	6.99E-03
105	GO:0006751: glutathione catabolic process	6.99E-03
106	GO:0015979: photosynthesis	7.97E-03
107	GO:0000271: polysaccharide biosynthetic process	7.99E-03
108	GO:0007623: circadian rhythm	8.05E-03
109	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	8.45E-03
110	GO:0006694: steroid biosynthetic process	8.45E-03
111	GO:0009741: response to brassinosteroid	8.62E-03
112	GO:0009610: response to symbiotic fungus	1.00E-02
113	GO:0006955: immune response	1.00E-02
114	GO:0009395: phospholipid catabolic process	1.00E-02
115	GO:0009772: photosynthetic electron transport in photosystem II	1.00E-02
116	GO:0043090: amino acid import	1.00E-02
117	GO:0030497: fatty acid elongation	1.00E-02
118	GO:0048437: floral organ development	1.00E-02
119	GO:0010444: guard mother cell differentiation	1.00E-02
120	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.00E-02
121	GO:0071669: plant-type cell wall organization or biogenesis	1.00E-02
122	GO:0051510: regulation of unidimensional cell growth	1.00E-02
123	GO:0050829: defense response to Gram-negative bacterium	1.00E-02
124	GO:0071554: cell wall organization or biogenesis	1.07E-02
125	GO:0048564: photosystem I assembly	1.17E-02
126	GO:0008610: lipid biosynthetic process	1.17E-02
127	GO:0043068: positive regulation of programmed cell death	1.17E-02
128	GO:0006605: protein targeting	1.17E-02
129	GO:0019375: galactolipid biosynthetic process	1.17E-02
130	GO:0009704: de-etiolation	1.17E-02
131	GO:2000070: regulation of response to water deprivation	1.17E-02
132	GO:0009416: response to light stimulus	1.18E-02
133	GO:0006096: glycolytic process	1.22E-02
134	GO:0030163: protein catabolic process	1.22E-02
135	GO:0009932: cell tip growth	1.34E-02
136	GO:0071482: cellular response to light stimulus	1.34E-02
137	GO:0006526: arginine biosynthetic process	1.34E-02
138	GO:0010497: plasmodesmata-mediated intercellular transport	1.34E-02
139	GO:0009657: plastid organization	1.34E-02
140	GO:0009808: lignin metabolic process	1.34E-02
141	GO:0010093: specification of floral organ identity	1.34E-02
142	GO:0009826: unidimensional cell growth	1.48E-02
143	GO:0042545: cell wall modification	1.49E-02
144	GO:0009051: pentose-phosphate shunt, oxidative branch	1.53E-02
145	GO:0080144: amino acid homeostasis	1.53E-02
146	GO:2000024: regulation of leaf development	1.53E-02
147	GO:0033384: geranyl diphosphate biosynthetic process	1.53E-02
148	GO:0045337: farnesyl diphosphate biosynthetic process	1.53E-02
149	GO:0000373: Group II intron splicing	1.53E-02
150	GO:0055114: oxidation-reduction process	1.60E-02
151	GO:0009742: brassinosteroid mediated signaling pathway	1.66E-02
152	GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	1.72E-02
153	GO:0010205: photoinhibition	1.72E-02
154	GO:0009638: phototropism	1.72E-02
155	GO:0009627: systemic acquired resistance	1.74E-02
156	GO:0042128: nitrate assimilation	1.74E-02
157	GO:0071555: cell wall organization	1.83E-02
158	GO:0006535: cysteine biosynthetic process from serine	1.92E-02
159	GO:0009688: abscisic acid biosynthetic process	1.92E-02
160	GO:0043069: negative regulation of programmed cell death	1.92E-02
161	GO:0016311: dephosphorylation	1.93E-02
162	GO:0030244: cellulose biosynthetic process	2.03E-02
163	GO:0018298: protein-chromophore linkage	2.03E-02
164	GO:0000038: very long-chain fatty acid metabolic process	2.13E-02
165	GO:0019684: photosynthesis, light reaction	2.13E-02
166	GO:0009089: lysine biosynthetic process via diaminopimelate	2.13E-02
167	GO:0009073: aromatic amino acid family biosynthetic process	2.13E-02
168	GO:0006816: calcium ion transport	2.13E-02
169	GO:0009773: photosynthetic electron transport in photosystem I	2.13E-02
170	GO:0006879: cellular iron ion homeostasis	2.13E-02
171	GO:0006352: DNA-templated transcription, initiation	2.13E-02
172	GO:0009750: response to fructose	2.13E-02
173	GO:0018119: peptidyl-cysteine S-nitrosylation	2.13E-02
174	GO:0048229: gametophyte development	2.13E-02
175	GO:0006415: translational termination	2.13E-02
176	GO:0030148: sphingolipid biosynthetic process	2.13E-02
177	GO:0000160: phosphorelay signal transduction system	2.14E-02
178	GO:0009407: toxin catabolic process	2.24E-02
179	GO:0012501: programmed cell death	2.34E-02
180	GO:0015706: nitrate transport	2.34E-02
181	GO:0010152: pollen maturation	2.34E-02
182	GO:0045037: protein import into chloroplast stroma	2.34E-02
183	GO:0006094: gluconeogenesis	2.57E-02
184	GO:0030048: actin filament-based movement	2.57E-02
185	GO:0010628: positive regulation of gene expression	2.57E-02
186	GO:0006006: glucose metabolic process	2.57E-02
187	GO:0050826: response to freezing	2.57E-02
188	GO:0009718: anthocyanin-containing compound biosynthetic process	2.57E-02
189	GO:0010075: regulation of meristem growth	2.57E-02
190	GO:0009934: regulation of meristem structural organization	2.80E-02
191	GO:0048768: root hair cell tip growth	2.80E-02
192	GO:0010143: cutin biosynthetic process	2.80E-02
193	GO:0009933: meristem structural organization	2.80E-02
194	GO:0019253: reductive pentose-phosphate cycle	2.80E-02
195	GO:0040008: regulation of growth	2.91E-02
196	GO:0010167: response to nitrate	3.04E-02
197	GO:0090351: seedling development	3.04E-02
198	GO:0010030: positive regulation of seed germination	3.04E-02
199	GO:0006636: unsaturated fatty acid biosynthetic process	3.28E-02
200	GO:0051707: response to other organism	3.33E-02
201	GO:0010114: response to red light	3.33E-02
202	GO:0042546: cell wall biogenesis	3.46E-02
203	GO:0019344: cysteine biosynthetic process	3.53E-02
204	GO:0009944: polarity specification of adaxial/abaxial axis	3.53E-02
205	GO:0000027: ribosomal large subunit assembly	3.53E-02
206	GO:0051017: actin filament bundle assembly	3.53E-02
207	GO:0016042: lipid catabolic process	3.67E-02
208	GO:0009636: response to toxic substance	3.74E-02
209	GO:0007017: microtubule-based process	3.79E-02
210	GO:0016998: cell wall macromolecule catabolic process	4.05E-02
211	GO:0042538: hyperosmotic salinity response	4.17E-02
212	GO:0005975: carbohydrate metabolic process	4.26E-02
213	GO:0016226: iron-sulfur cluster assembly	4.32E-02
214	GO:0006730: one-carbon metabolic process	4.32E-02
215	GO:0009736: cytokinin-activated signaling pathway	4.47E-02
216	GO:0006857: oligopeptide transport	4.78E-02
217	GO:0048443: stamen development	4.88E-02
218	GO:0019722: calcium-mediated signaling	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0005048: signal sequence binding	0.00E+00
2	GO:0050614: delta24-sterol reductase activity	0.00E+00
3	GO:0005222: intracellular cAMP activated cation channel activity	0.00E+00
4	GO:0038198: auxin receptor activity	0.00E+00
5	GO:0046406: magnesium protoporphyrin IX methyltransferase activity	0.00E+00
6	GO:0047513: 1,2-alpha-L-fucosidase activity	0.00E+00
7	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
8	GO:0010301: xanthoxin dehydrogenase activity	0.00E+00
9	GO:0004823: leucine-tRNA ligase activity	0.00E+00
10	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
11	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
12	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
13	GO:1990534: thermospermine oxidase activity	0.00E+00
14	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
15	GO:0019843: rRNA binding	4.17E-16
16	GO:0003735: structural constituent of ribosome	5.58E-10
17	GO:0016851: magnesium chelatase activity	1.11E-06
18	GO:0002161: aminoacyl-tRNA editing activity	5.65E-05
19	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.05E-04
20	GO:0005528: FK506 binding	5.00E-04
21	GO:0051920: peroxiredoxin activity	5.67E-04
22	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	6.31E-04
23	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	6.31E-04
24	GO:0004807: triose-phosphate isomerase activity	6.31E-04
25	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	6.31E-04
26	GO:0047560: 3-dehydrosphinganine reductase activity	6.31E-04
27	GO:0009374: biotin binding	6.31E-04
28	GO:0042834: peptidoglycan binding	6.31E-04
29	GO:0080132: fatty acid alpha-hydroxylase activity	6.31E-04
30	GO:0004655: porphobilinogen synthase activity	6.31E-04
31	GO:0004853: uroporphyrinogen decarboxylase activity	6.31E-04
32	GO:0004328: formamidase activity	6.31E-04
33	GO:0045485: omega-6 fatty acid desaturase activity	6.31E-04
34	GO:0005221: intracellular cyclic nucleotide activated cation channel activity	6.31E-04
35	GO:0016209: antioxidant activity	9.01E-04
36	GO:0009977: proton motive force dependent protein transmembrane transporter activity	1.36E-03
37	GO:0003938: IMP dehydrogenase activity	1.36E-03
38	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	1.36E-03
39	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	1.36E-03
40	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	1.36E-03
41	GO:0015929: hexosaminidase activity	1.36E-03
42	GO:0004563: beta-N-acetylhexosaminidase activity	1.36E-03
43	GO:0000822: inositol hexakisphosphate binding	1.36E-03
44	GO:0003839: gamma-glutamylcyclotransferase activity	1.36E-03
45	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	1.36E-03
46	GO:0005381: iron ion transmembrane transporter activity	1.55E-03
47	GO:0004805: trehalose-phosphatase activity	1.81E-03
48	GO:0052689: carboxylic ester hydrolase activity	2.16E-03
49	GO:0017150: tRNA dihydrouridine synthase activity	2.24E-03
50	GO:0003913: DNA photolyase activity	2.24E-03
51	GO:0045174: glutathione dehydrogenase (ascorbate) activity	2.24E-03
52	GO:0004148: dihydrolipoyl dehydrogenase activity	2.24E-03
53	GO:0030267: glyoxylate reductase (NADP) activity	2.24E-03
54	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	2.24E-03
55	GO:0015250: water channel activity	2.54E-03
56	GO:0001872: (1->3)-beta-D-glucan binding	3.25E-03
57	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	3.25E-03
58	GO:0035250: UDP-galactosyltransferase activity	3.25E-03
59	GO:0016149: translation release factor activity, codon specific	3.25E-03
60	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	3.25E-03
61	GO:0043023: ribosomal large subunit binding	3.25E-03
62	GO:0008097: 5S rRNA binding	3.25E-03
63	GO:0010011: auxin binding	4.38E-03
64	GO:0004345: glucose-6-phosphate dehydrogenase activity	4.38E-03
65	GO:0016836: hydro-lyase activity	4.38E-03
66	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	4.38E-03
67	GO:0046527: glucosyltransferase activity	4.38E-03
68	GO:0016987: sigma factor activity	4.38E-03
69	GO:0052793: pectin acetylesterase activity	4.38E-03
70	GO:0004506: squalene monooxygenase activity	4.38E-03
71	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	4.38E-03
72	GO:0004659: prenyltransferase activity	4.38E-03
73	GO:0001053: plastid sigma factor activity	4.38E-03
74	GO:0016788: hydrolase activity, acting on ester bonds	4.47E-03
75	GO:0003993: acid phosphatase activity	5.13E-03
76	GO:0009922: fatty acid elongase activity	5.63E-03
77	GO:0003989: acetyl-CoA carboxylase activity	5.63E-03
78	GO:0030570: pectate lyase activity	6.25E-03
79	GO:0004364: glutathione transferase activity	6.37E-03
80	GO:1990714: hydroxyproline O-galactosyltransferase activity	6.99E-03
81	GO:0016208: AMP binding	6.99E-03
82	GO:0004130: cytochrome-c peroxidase activity	6.99E-03
83	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	6.99E-03
84	GO:0042578: phosphoric ester hydrolase activity	6.99E-03
85	GO:0004812: aminoacyl-tRNA ligase activity	7.39E-03
86	GO:0004124: cysteine synthase activity	8.45E-03
87	GO:0051753: mannan synthase activity	8.45E-03
88	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	8.45E-03
89	GO:0005261: cation channel activity	8.45E-03
90	GO:0004559: alpha-mannosidase activity	8.45E-03
91	GO:0005242: inward rectifier potassium channel activity	8.45E-03
92	GO:0009881: photoreceptor activity	1.00E-02
93	GO:0045330: aspartyl esterase activity	1.12E-02
94	GO:0008312: 7S RNA binding	1.17E-02
95	GO:0004033: aldo-keto reductase (NADP) activity	1.17E-02
96	GO:0004869: cysteine-type endopeptidase inhibitor activity	1.17E-02
97	GO:0000156: phosphorelay response regulator activity	1.22E-02
98	GO:0016491: oxidoreductase activity	1.35E-02
99	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.38E-02
100	GO:0030599: pectinesterase activity	1.43E-02
101	GO:0016413: O-acetyltransferase activity	1.47E-02
102	GO:0004337: geranyltranstransferase activity	1.53E-02
103	GO:0003747: translation release factor activity	1.53E-02
104	GO:0005384: manganese ion transmembrane transporter activity	1.72E-02
105	GO:0008236: serine-type peptidase activity	1.93E-02
106	GO:0016758: transferase activity, transferring hexosyl groups	1.99E-02
107	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.03E-02
108	GO:0004161: dimethylallyltranstransferase activity	2.13E-02
109	GO:0008289: lipid binding	2.20E-02
110	GO:0005215: transporter activity	2.25E-02
111	GO:0016829: lyase activity	2.27E-02
112	GO:0008378: galactosyltransferase activity	2.34E-02
113	GO:0004252: serine-type endopeptidase activity	2.34E-02
114	GO:0000049: tRNA binding	2.34E-02
115	GO:0005262: calcium channel activity	2.57E-02
116	GO:0004022: alcohol dehydrogenase (NAD) activity	2.57E-02
117	GO:0004565: beta-galactosidase activity	2.57E-02
118	GO:0015095: magnesium ion transmembrane transporter activity	2.57E-02
119	GO:0031072: heat shock protein binding	2.57E-02
120	GO:0005516: calmodulin binding	2.58E-02
121	GO:0003774: motor activity	2.80E-02
122	GO:0008131: primary amine oxidase activity	2.80E-02
123	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.80E-02
124	GO:0004871: signal transducer activity	3.02E-02
125	GO:0030552: cAMP binding	3.04E-02
126	GO:0030553: cGMP binding	3.04E-02
127	GO:0004190: aspartic-type endopeptidase activity	3.04E-02
128	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	3.28E-02
129	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	3.28E-02
130	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	3.28E-02
131	GO:0051536: iron-sulfur cluster binding	3.53E-02
132	GO:0015293: symporter activity	3.74E-02
133	GO:0005216: ion channel activity	3.79E-02
134	GO:0003924: GTPase activity	3.82E-02
135	GO:0033612: receptor serine/threonine kinase binding	4.05E-02
136	GO:0019706: protein-cysteine S-palmitoyltransferase activity	4.05E-02
137	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	4.32E-02
138	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.47E-02
139	GO:0022891: substrate-specific transmembrane transporter activity	4.60E-02
140	GO:0016760: cellulose synthase (UDP-forming) activity	4.60E-02
141	GO:0003756: protein disulfide isomerase activity	4.88E-02
142	GO:0003727: single-stranded RNA binding	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0000408: EKC/KEOPS complex	0.00E+00
2	GO:0009570: chloroplast stroma	1.74E-32
3	GO:0009507: chloroplast	1.53E-31
4	GO:0009941: chloroplast envelope	1.19E-24
5	GO:0009543: chloroplast thylakoid lumen	1.62E-09
6	GO:0009505: plant-type cell wall	3.12E-09
7	GO:0009535: chloroplast thylakoid membrane	9.60E-09
8	GO:0005840: ribosome	3.67E-08
9	GO:0010007: magnesium chelatase complex	2.33E-07
10	GO:0009534: chloroplast thylakoid	2.89E-07
11	GO:0046658: anchored component of plasma membrane	4.43E-06
12	GO:0009579: thylakoid	1.07E-05
13	GO:0031977: thylakoid lumen	2.16E-05
14	GO:0009295: nucleoid	3.33E-05
15	GO:0031225: anchored component of membrane	3.58E-05
16	GO:0009536: plastid	2.26E-04
17	GO:0000312: plastid small ribosomal subunit	3.23E-04
18	GO:0005618: cell wall	3.68E-04
19	GO:0005886: plasma membrane	4.97E-04
20	GO:0005576: extracellular region	5.21E-04
21	GO:0043674: columella	6.31E-04
22	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	6.31E-04
23	GO:0000428: DNA-directed RNA polymerase complex	6.31E-04
24	GO:0009533: chloroplast stromal thylakoid	7.25E-04
25	GO:0016020: membrane	8.46E-04
26	GO:0080085: signal recognition particle, chloroplast targeting	1.36E-03
27	GO:0048046: apoplast	1.43E-03
28	GO:0031969: chloroplast membrane	1.77E-03
29	GO:0033281: TAT protein transport complex	2.24E-03
30	GO:0009509: chromoplast	2.24E-03
31	GO:0009317: acetyl-CoA carboxylase complex	2.24E-03
32	GO:0000311: plastid large ribosomal subunit	2.41E-03
33	GO:0009508: plastid chromosome	2.74E-03
34	GO:0032432: actin filament bundle	3.25E-03
35	GO:0009706: chloroplast inner membrane	3.49E-03
36	GO:0015934: large ribosomal subunit	4.30E-03
37	GO:0042807: central vacuole	1.00E-02
38	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.34E-02
39	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.53E-02
40	GO:0045298: tubulin complex	1.53E-02
41	GO:0016459: myosin complex	1.92E-02
42	GO:0005884: actin filament	2.13E-02
43	GO:0030659: cytoplasmic vesicle membrane	2.80E-02
44	GO:0030095: chloroplast photosystem II	2.80E-02
45	GO:0022626: cytosolic ribosome	3.07E-02
46	GO:0009654: photosystem II oxygen evolving complex	3.79E-02
47	GO:0015935: small ribosomal subunit	4.05E-02
48	GO:0009532: plastid stroma	4.05E-02
49	GO:0022627: cytosolic small ribosomal subunit	4.35E-02