co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G26960

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033231: carbohydrate export	0.00E+00
2	GO:0097164: ammonium ion metabolic process	0.00E+00
3	GO:0006223: uracil salvage	0.00E+00
4	GO:0032544: plastid translation	8.55E-07
5	GO:0010444: guard mother cell differentiation	4.66E-05
6	GO:0045454: cell redox homeostasis	6.96E-05
7	GO:0009932: cell tip growth	7.69E-05
8	GO:1902334: fructose export from vacuole to cytoplasm	1.04E-04
9	GO:0015755: fructose transport	1.04E-04
10	GO:0010442: guard cell morphogenesis	1.04E-04
11	GO:0052541: plant-type cell wall cellulose metabolic process	2.44E-04
12	GO:0070981: L-asparagine biosynthetic process	2.44E-04
13	GO:0006529: asparagine biosynthetic process	2.44E-04
14	GO:0006568: tryptophan metabolic process	2.44E-04
15	GO:2000123: positive regulation of stomatal complex development	2.44E-04
16	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	4.05E-04
17	GO:0070417: cellular response to cold	5.78E-04
18	GO:0006241: CTP biosynthetic process	5.82E-04
19	GO:0006165: nucleoside diphosphate phosphorylation	5.82E-04
20	GO:0006228: UTP biosynthetic process	5.82E-04
21	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	5.82E-04
22	GO:0009646: response to absence of light	7.18E-04
23	GO:0006183: GTP biosynthetic process	7.73E-04
24	GO:0044206: UMP salvage	7.73E-04
25	GO:2000038: regulation of stomatal complex development	7.73E-04
26	GO:0010375: stomatal complex patterning	9.77E-04
27	GO:0043097: pyrimidine nucleoside salvage	9.77E-04
28	GO:0045038: protein import into chloroplast thylakoid membrane	9.77E-04
29	GO:0016123: xanthophyll biosynthetic process	9.77E-04
30	GO:0007267: cell-cell signaling	1.04E-03
31	GO:0006555: methionine metabolic process	1.19E-03
32	GO:0006206: pyrimidine nucleobase metabolic process	1.19E-03
33	GO:0007035: vacuolar acidification	1.19E-03
34	GO:0009117: nucleotide metabolic process	1.19E-03
35	GO:0009972: cytidine deamination	1.19E-03
36	GO:0009955: adaxial/abaxial pattern specification	1.43E-03
37	GO:1901259: chloroplast rRNA processing	1.43E-03
38	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.43E-03
39	GO:0009735: response to cytokinin	1.52E-03
40	GO:0000160: phosphorelay signal transduction system	1.58E-03
41	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.67E-03
42	GO:0009658: chloroplast organization	1.94E-03
43	GO:0007049: cell cycle	2.23E-03
44	GO:0008643: carbohydrate transport	2.63E-03
45	GO:0035999: tetrahydrofolate interconversion	2.79E-03
46	GO:0042538: hyperosmotic salinity response	3.05E-03
47	GO:0006995: cellular response to nitrogen starvation	3.10E-03
48	GO:0006535: cysteine biosynthetic process from serine	3.10E-03
49	GO:0009736: cytokinin-activated signaling pathway	3.27E-03
50	GO:0006415: translational termination	3.42E-03
51	GO:0043085: positive regulation of catalytic activity	3.42E-03
52	GO:0009750: response to fructose	3.42E-03
53	GO:0048765: root hair cell differentiation	3.42E-03
54	GO:0030148: sphingolipid biosynthetic process	3.42E-03
55	GO:0000038: very long-chain fatty acid metabolic process	3.42E-03
56	GO:0050826: response to freezing	4.09E-03
57	GO:0006541: glutamine metabolic process	4.44E-03
58	GO:0010053: root epidermal cell differentiation	4.80E-03
59	GO:0051726: regulation of cell cycle	4.91E-03
60	GO:0006071: glycerol metabolic process	5.18E-03
61	GO:0009116: nucleoside metabolic process	5.56E-03
62	GO:0006487: protein N-linked glycosylation	5.56E-03
63	GO:0019344: cysteine biosynthetic process	5.56E-03
64	GO:0010026: trichome differentiation	5.95E-03
65	GO:0015992: proton transport	6.35E-03
66	GO:0051260: protein homooligomerization	6.35E-03
67	GO:0006730: one-carbon metabolic process	6.76E-03
68	GO:0009411: response to UV	7.18E-03
69	GO:0006633: fatty acid biosynthetic process	7.28E-03
70	GO:0019722: calcium-mediated signaling	7.61E-03
71	GO:0042127: regulation of cell proliferation	7.61E-03
72	GO:0040008: regulation of growth	7.63E-03
73	GO:0055114: oxidation-reduction process	7.74E-03
74	GO:0007623: circadian rhythm	8.00E-03
75	GO:0016117: carotenoid biosynthetic process	8.05E-03
76	GO:0042335: cuticle development	8.49E-03
77	GO:0006662: glycerol ether metabolic process	8.95E-03
78	GO:0051301: cell division	9.64E-03
79	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.04E-02
80	GO:0010583: response to cyclopentenone	1.09E-02
81	GO:0032502: developmental process	1.09E-02
82	GO:1901657: glycosyl compound metabolic process	1.14E-02
83	GO:0009567: double fertilization forming a zygote and endosperm	1.19E-02
84	GO:0009860: pollen tube growth	1.34E-02
85	GO:0016126: sterol biosynthetic process	1.35E-02
86	GO:0010027: thylakoid membrane organization	1.35E-02
87	GO:0009813: flavonoid biosynthetic process	1.68E-02
88	GO:0007568: aging	1.80E-02
89	GO:0034599: cellular response to oxidative stress	1.98E-02
90	GO:0006631: fatty acid metabolic process	2.17E-02
91	GO:0042542: response to hydrogen peroxide	2.24E-02
92	GO:0006629: lipid metabolic process	2.28E-02
93	GO:0010114: response to red light	2.30E-02
94	GO:0009585: red, far-red light phototransduction	2.84E-02
95	GO:0009734: auxin-activated signaling pathway	3.21E-02
96	GO:0048316: seed development	3.28E-02
97	GO:0009845: seed germination	4.54E-02
98	GO:0042744: hydrogen peroxide catabolic process	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0050613: delta14-sterol reductase activity	0.00E+00
2	GO:0015284: fructose uniporter activity	0.00E+00
3	GO:0005048: signal sequence binding	0.00E+00
4	GO:0008794: arsenate reductase (glutaredoxin) activity	2.51E-08
5	GO:0015035: protein disulfide oxidoreductase activity	2.69E-06
6	GO:0051537: 2 iron, 2 sulfur cluster binding	1.65E-05
7	GO:0004425: indole-3-glycerol-phosphate synthase activity	1.04E-04
8	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	1.04E-04
9	GO:0004071: aspartate-ammonia ligase activity	1.04E-04
10	GO:0052631: sphingolipid delta-8 desaturase activity	1.04E-04
11	GO:0009374: biotin binding	1.04E-04
12	GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity	1.04E-04
13	GO:0030794: (S)-coclaurine-N-methyltransferase activity	1.04E-04
14	GO:0009055: electron carrier activity	1.26E-04
15	GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity	2.44E-04
16	GO:0005353: fructose transmembrane transporter activity	2.44E-04
17	GO:0010291: carotene beta-ring hydroxylase activity	2.44E-04
18	GO:0051119: sugar transmembrane transporter activity	2.74E-04
19	GO:0004148: dihydrolipoyl dehydrogenase activity	4.05E-04
20	GO:0005504: fatty acid binding	4.05E-04
21	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	5.82E-04
22	GO:0035529: NADH pyrophosphatase activity	5.82E-04
23	GO:0016149: translation release factor activity, codon specific	5.82E-04
24	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	5.82E-04
25	GO:0004550: nucleoside diphosphate kinase activity	5.82E-04
26	GO:0019901: protein kinase binding	7.69E-04
27	GO:0004045: aminoacyl-tRNA hydrolase activity	7.73E-04
28	GO:0045430: chalcone isomerase activity	7.73E-04
29	GO:0004845: uracil phosphoribosyltransferase activity	7.73E-04
30	GO:0000156: phosphorelay response regulator activity	9.28E-04
31	GO:0004040: amidase activity	9.77E-04
32	GO:0003989: acetyl-CoA carboxylase activity	9.77E-04
33	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.04E-03
34	GO:0016462: pyrophosphatase activity	1.19E-03
35	GO:0004126: cytidine deaminase activity	1.43E-03
36	GO:0051753: mannan synthase activity	1.43E-03
37	GO:0004849: uridine kinase activity	1.43E-03
38	GO:0004124: cysteine synthase activity	1.43E-03
39	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.66E-03
40	GO:0008312: 7S RNA binding	1.93E-03
41	GO:0008889: glycerophosphodiester phosphodiesterase activity	2.49E-03
42	GO:0003747: translation release factor activity	2.49E-03
43	GO:0008047: enzyme activator activity	3.10E-03
44	GO:0046961: proton-transporting ATPase activity, rotational mechanism	3.42E-03
45	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	5.18E-03
46	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	5.18E-03
47	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	5.18E-03
48	GO:0008514: organic anion transmembrane transporter activity	7.61E-03
49	GO:0047134: protein-disulfide reductase activity	8.05E-03
50	GO:0004791: thioredoxin-disulfide reductase activity	9.42E-03
51	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.14E-02
52	GO:0016597: amino acid binding	1.29E-02
53	GO:0005507: copper ion binding	1.35E-02
54	GO:0008375: acetylglucosaminyltransferase activity	1.45E-02
55	GO:0102483: scopolin beta-glucosidase activity	1.51E-02
56	GO:0052689: carboxylic ester hydrolase activity	1.70E-02
57	GO:0008422: beta-glucosidase activity	2.04E-02
58	GO:0046872: metal ion binding	2.76E-02
59	GO:0016491: oxidoreductase activity	2.98E-02
60	GO:0008289: lipid binding	3.17E-02
61	GO:0004650: polygalacturonase activity	3.43E-02
62	GO:0019843: rRNA binding	4.29E-02
63	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.37E-02
64	GO:0030170: pyridoxal phosphate binding	4.62E-02
65	GO:0015144: carbohydrate transmembrane transporter activity	4.87E-02
66	GO:0016740: transferase activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0009570: chloroplast stroma	6.10E-10
2	GO:0009507: chloroplast	1.15E-06
3	GO:0031225: anchored component of membrane	1.85E-05
4	GO:0046658: anchored component of plasma membrane	1.98E-05
5	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	1.04E-04
6	GO:0080085: signal recognition particle, chloroplast targeting	2.44E-04
7	GO:0048046: apoplast	2.68E-04
8	GO:0009509: chromoplast	4.05E-04
9	GO:0009317: acetyl-CoA carboxylase complex	4.05E-04
10	GO:0009941: chloroplast envelope	5.15E-04
11	GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain	9.77E-04
12	GO:0009505: plant-type cell wall	1.74E-03
13	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	2.21E-03
14	GO:0009579: thylakoid	2.29E-03
15	GO:0005763: mitochondrial small ribosomal subunit	2.49E-03
16	GO:0030176: integral component of endoplasmic reticulum membrane	4.80E-03
17	GO:0009654: photosystem II oxygen evolving complex	5.95E-03
18	GO:0009536: plastid	6.95E-03
19	GO:0019898: extrinsic component of membrane	9.90E-03
20	GO:0030529: intracellular ribonucleoprotein complex	1.35E-02
21	GO:0005622: intracellular	1.79E-02
22	GO:0015934: large ribosomal subunit	1.80E-02
23	GO:0005840: ribosome	2.24E-02
24	GO:0009543: chloroplast thylakoid lumen	4.29E-02
25	GO:0005623: cell	4.37E-02
26	GO:0009534: chloroplast thylakoid	4.85E-02