co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G25980

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033614: chloroplast proton-transporting ATP synthase complex assembly	0.00E+00
2	GO:0015805: S-adenosyl-L-methionine transport	0.00E+00
3	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
4	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	8.58E-05
5	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.41E-04
6	GO:0016559: peroxisome fission	2.37E-04
7	GO:1903507: negative regulation of nucleic acid-templated transcription	4.19E-04
8	GO:0046856: phosphatidylinositol dephosphorylation	4.19E-04
9	GO:0006820: anion transport	4.58E-04
10	GO:0048768: root hair cell tip growth	5.39E-04
11	GO:0007031: peroxisome organization	5.80E-04
12	GO:0008299: isoprenoid biosynthetic process	7.09E-04
13	GO:2000022: regulation of jasmonic acid mediated signaling pathway	7.99E-04
14	GO:1901657: glycosyl compound metabolic process	1.29E-03
15	GO:0016125: sterol metabolic process	1.34E-03
16	GO:0016126: sterol biosynthetic process	1.50E-03
17	GO:0006839: mitochondrial transport	2.29E-03
18	GO:0031347: regulation of defense response	2.83E-03
19	GO:0005975: carbohydrate metabolic process	4.88E-03
20	GO:0046686: response to cadmium ion	5.01E-03
21	GO:0009658: chloroplast organization	7.59E-03
22	GO:0016310: phosphorylation	7.89E-03
23	GO:0080167: response to karrikin	8.82E-03
24	GO:0006869: lipid transport	1.07E-02
25	GO:0016042: lipid catabolic process	1.14E-02
26	GO:0009611: response to wounding	1.77E-02
27	GO:0051301: cell division	1.85E-02
28	GO:0030154: cell differentiation	3.06E-02
29	GO:0006810: transport	3.79E-02

Rank	GO Term	Adjusted P value
1	GO:0004496: mevalonate kinase activity	0.00E+00
2	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
3	GO:0004856: xylulokinase activity	8.12E-06
4	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	2.19E-05
5	GO:0070402: NADPH binding	3.99E-05
6	GO:0004445: inositol-polyphosphate 5-phosphatase activity	6.14E-05
7	GO:0008381: mechanically-gated ion channel activity	1.12E-04
8	GO:0016773: phosphotransferase activity, alcohol group as acceptor	1.12E-04
9	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	1.41E-04
10	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	1.71E-04
11	GO:0004033: aldo-keto reductase (NADP) activity	2.37E-04
12	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	4.58E-04
13	GO:0003714: transcription corepressor activity	6.66E-04
14	GO:0016853: isomerase activity	1.08E-03
15	GO:0102483: scopolin beta-glucosidase activity	1.67E-03
16	GO:0030145: manganese ion binding	1.97E-03
17	GO:0008422: beta-glucosidase activity	2.23E-03
18	GO:0016491: oxidoreductase activity	4.25E-03
19	GO:0042802: identical protein binding	6.62E-03
20	GO:0016788: hydrolase activity, acting on ester bonds	7.69E-03
21	GO:0052689: carboxylic ester hydrolase activity	9.46E-03
22	GO:0008289: lipid binding	1.47E-02
23	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.12E-02
24	GO:0005509: calcium ion binding	2.72E-02
25	GO:0016787: hydrolase activity	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0005779: integral component of peroxisomal membrane	2.71E-04
2	GO:0005778: peroxisomal membrane	1.39E-03
3	GO:0009536: plastid	3.95E-03
4	GO:0031969: chloroplast membrane	8.82E-03
5	GO:0005743: mitochondrial inner membrane	1.10E-02
6	GO:0009941: chloroplast envelope	1.52E-02
7	GO:0005777: peroxisome	1.92E-02
8	GO:0009534: chloroplast thylakoid	1.99E-02
9	GO:0009570: chloroplast stroma	2.12E-02
10	GO:0009507: chloroplast	3.16E-02
11	GO:0009505: plant-type cell wall	3.39E-02