co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G25500

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042493: response to drug	0.00E+00
2	GO:1905499: trichome papilla formation	0.00E+00
3	GO:0071555: cell wall organization	2.21E-10
4	GO:0019510: S-adenosylhomocysteine catabolic process	5.03E-05
5	GO:0005980: glycogen catabolic process	5.03E-05
6	GO:0042759: long-chain fatty acid biosynthetic process	5.03E-05
7	GO:0042546: cell wall biogenesis	6.53E-05
8	GO:0010025: wax biosynthetic process	1.11E-04
9	GO:0009833: plant-type primary cell wall biogenesis	1.11E-04
10	GO:0033353: S-adenosylmethionine cycle	1.23E-04
11	GO:0006869: lipid transport	1.28E-04
12	GO:0007017: microtubule-based process	1.39E-04
13	GO:0030245: cellulose catabolic process	1.70E-04
14	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.87E-04
15	GO:0006065: UDP-glucuronate biosynthetic process	2.11E-04
16	GO:0042335: cuticle development	2.41E-04
17	GO:0009650: UV protection	3.09E-04
18	GO:0009828: plant-type cell wall loosening	3.91E-04
19	GO:0015689: molybdate ion transport	4.15E-04
20	GO:0006665: sphingolipid metabolic process	5.26E-04
21	GO:0048359: mucilage metabolic process involved in seed coat development	5.26E-04
22	GO:0010411: xyloglucan metabolic process	5.46E-04
23	GO:0009826: unidimensional cell growth	5.57E-04
24	GO:0030244: cellulose biosynthetic process	6.02E-04
25	GO:0009832: plant-type cell wall biogenesis	6.32E-04
26	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	6.44E-04
27	GO:0006014: D-ribose metabolic process	6.44E-04
28	GO:0016051: carbohydrate biosynthetic process	7.56E-04
29	GO:0042538: hyperosmotic salinity response	1.19E-03
30	GO:0009664: plant-type cell wall organization	1.19E-03
31	GO:0015780: nucleotide-sugar transport	1.32E-03
32	GO:0042761: very long-chain fatty acid biosynthetic process	1.47E-03
33	GO:0016573: histone acetylation	1.47E-03
34	GO:0006949: syncytium formation	1.63E-03
35	GO:0009266: response to temperature stimulus	2.32E-03
36	GO:0009825: multidimensional cell growth	2.50E-03
37	GO:0006338: chromatin remodeling	2.88E-03
38	GO:0045490: pectin catabolic process	3.07E-03
39	GO:0043622: cortical microtubule organization	3.08E-03
40	GO:0016998: cell wall macromolecule catabolic process	3.29E-03
41	GO:0006730: one-carbon metabolic process	3.50E-03
42	GO:0009294: DNA mediated transformation	3.71E-03
43	GO:0009411: response to UV	3.71E-03
44	GO:0019722: calcium-mediated signaling	3.93E-03
45	GO:0010091: trichome branching	3.93E-03
46	GO:0080022: primary root development	4.37E-03
47	GO:0045489: pectin biosynthetic process	4.60E-03
48	GO:0019252: starch biosynthetic process	5.07E-03
49	GO:0010583: response to cyclopentenone	5.56E-03
50	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	6.06E-03
51	GO:0007267: cell-cell signaling	6.33E-03
52	GO:0016049: cell growth	7.96E-03
53	GO:0009813: flavonoid biosynthetic process	8.53E-03
54	GO:0006631: fatty acid metabolic process	1.10E-02
55	GO:0010114: response to red light	1.16E-02
56	GO:0008643: carbohydrate transport	1.23E-02
57	GO:0048367: shoot system development	1.65E-02
58	GO:0042545: cell wall modification	1.80E-02
59	GO:0006633: fatty acid biosynthetic process	2.54E-02
60	GO:0009739: response to gibberellin	2.95E-02
61	GO:0006470: protein dephosphorylation	2.99E-02
62	GO:0009414: response to water deprivation	3.04E-02
63	GO:0009617: response to bacterium	3.08E-02
64	GO:0016192: vesicle-mediated transport	4.48E-02

Rank	GO Term	Adjusted P value
1	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
2	GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity	0.00E+00
3	GO:0016759: cellulose synthase activity	1.37E-05
4	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	5.03E-05
5	GO:0004013: adenosylhomocysteinase activity	5.03E-05
6	GO:0008184: glycogen phosphorylase activity	5.03E-05
7	GO:0004645: phosphorylase activity	5.03E-05
8	GO:0016757: transferase activity, transferring glycosyl groups	7.68E-05
9	GO:0048531: beta-1,3-galactosyltransferase activity	1.23E-04
10	GO:0016760: cellulose synthase (UDP-forming) activity	1.87E-04
11	GO:0008810: cellulase activity	1.87E-04
12	GO:0003979: UDP-glucose 6-dehydrogenase activity	2.11E-04
13	GO:0005504: fatty acid binding	2.11E-04
14	GO:0008289: lipid binding	2.72E-04
15	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	3.09E-04
16	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.23E-04
17	GO:0015098: molybdate ion transmembrane transporter activity	4.15E-04
18	GO:0045430: chalcone isomerase activity	4.15E-04
19	GO:0005200: structural constituent of cytoskeleton	4.15E-04
20	GO:0009922: fatty acid elongase activity	5.26E-04
21	GO:0016798: hydrolase activity, acting on glycosyl bonds	5.46E-04
22	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	6.15E-04
23	GO:0004747: ribokinase activity	7.68E-04
24	GO:0051753: mannan synthase activity	7.68E-04
25	GO:0008865: fructokinase activity	1.03E-03
26	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.03E-03
27	GO:0051287: NAD binding	1.15E-03
28	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	1.32E-03
29	GO:0015020: glucuronosyltransferase activity	1.63E-03
30	GO:0030599: pectinesterase activity	1.69E-03
31	GO:0004857: enzyme inhibitor activity	2.88E-03
32	GO:0030570: pectate lyase activity	3.71E-03
33	GO:0008514: organic anion transmembrane transporter activity	3.93E-03
34	GO:0003713: transcription coactivator activity	4.60E-03
35	GO:0016722: oxidoreductase activity, oxidizing metal ions	6.33E-03
36	GO:0052689: carboxylic ester hydrolase activity	6.46E-03
37	GO:0008375: acetylglucosaminyltransferase activity	7.40E-03
38	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	7.96E-03
39	GO:0003924: GTPase activity	8.64E-03
40	GO:0016301: kinase activity	9.74E-03
41	GO:0005198: structural molecule activity	1.26E-02
42	GO:0045330: aspartyl esterase activity	1.54E-02
43	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.65E-02
44	GO:0016829: lyase activity	2.29E-02
45	GO:0030170: pyridoxal phosphate binding	2.33E-02
46	GO:0005525: GTP binding	2.53E-02
47	GO:0016788: hydrolase activity, acting on ester bonds	3.76E-02
48	GO:0004674: protein serine/threonine kinase activity	4.58E-02

Rank	GO Term	Adjusted P value
1	GO:0031225: anchored component of membrane	3.68E-08
2	GO:0046658: anchored component of plasma membrane	5.21E-08
3	GO:0005618: cell wall	1.82E-06
4	GO:0005794: Golgi apparatus	2.62E-06
5	GO:0005886: plasma membrane	4.26E-06
6	GO:0009923: fatty acid elongase complex	5.03E-05
7	GO:0010330: cellulose synthase complex	2.11E-04
8	GO:0010005: cortical microtubule, transverse to long axis	7.68E-04
9	GO:0000123: histone acetyltransferase complex	8.97E-04
10	GO:0005768: endosome	9.96E-04
11	GO:0045298: tubulin complex	1.32E-03
12	GO:0000139: Golgi membrane	1.84E-03
13	GO:0048046: apoplast	2.02E-03
14	GO:0016020: membrane	2.21E-03
15	GO:0005875: microtubule associated complex	2.69E-03
16	GO:0005802: trans-Golgi network	4.59E-03
17	GO:0005576: extracellular region	6.91E-03
18	GO:0005789: endoplasmic reticulum membrane	1.06E-02
19	GO:0009570: chloroplast stroma	2.00E-02
20	GO:0016021: integral component of membrane	3.29E-02
21	GO:0009536: plastid	3.82E-02
22	GO:0009505: plant-type cell wall	3.90E-02
23	GO:0005874: microtubule	4.22E-02