co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G24180

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
2	GO:0072660: maintenance of protein location in plasma membrane	0.00E+00
3	GO:0071327: cellular response to trehalose stimulus	0.00E+00
4	GO:1900367: positive regulation of defense response to insect	0.00E+00
5	GO:0006468: protein phosphorylation	5.45E-11
6	GO:0006952: defense response	4.32E-08
7	GO:0080142: regulation of salicylic acid biosynthetic process	2.78E-07
8	GO:0042742: defense response to bacterium	9.43E-06
9	GO:0048194: Golgi vesicle budding	2.46E-05
10	GO:0007166: cell surface receptor signaling pathway	2.68E-05
11	GO:0009816: defense response to bacterium, incompatible interaction	4.11E-05
12	GO:0060548: negative regulation of cell death	4.46E-05
13	GO:0010942: positive regulation of cell death	1.04E-04
14	GO:0031348: negative regulation of defense response	1.20E-04
15	GO:0051707: response to other organism	1.52E-04
16	GO:0009751: response to salicylic acid	2.39E-04
17	GO:0009617: response to bacterium	2.40E-04
18	GO:1901183: positive regulation of camalexin biosynthetic process	2.55E-04
19	GO:0006643: membrane lipid metabolic process	2.55E-04
20	GO:0060862: negative regulation of floral organ abscission	2.55E-04
21	GO:0006805: xenobiotic metabolic process	2.55E-04
22	GO:0051245: negative regulation of cellular defense response	2.55E-04
23	GO:0009609: response to symbiotic bacterium	2.55E-04
24	GO:0043562: cellular response to nitrogen levels	2.94E-04
25	GO:2000031: regulation of salicylic acid mediated signaling pathway	2.94E-04
26	GO:0009626: plant-type hypersensitive response	3.66E-04
27	GO:0009620: response to fungus	3.85E-04
28	GO:0043069: negative regulation of programmed cell death	4.92E-04
29	GO:0019483: beta-alanine biosynthetic process	5.64E-04
30	GO:0031349: positive regulation of defense response	5.64E-04
31	GO:0010541: acropetal auxin transport	5.64E-04
32	GO:0051252: regulation of RNA metabolic process	5.64E-04
33	GO:0002221: pattern recognition receptor signaling pathway	5.64E-04
34	GO:0015914: phospholipid transport	5.64E-04
35	GO:2000072: regulation of defense response to fungus, incompatible interaction	5.64E-04
36	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	5.64E-04
37	GO:0010618: aerenchyma formation	5.64E-04
38	GO:0006212: uracil catabolic process	5.64E-04
39	GO:0010200: response to chitin	6.17E-04
40	GO:0000266: mitochondrial fission	6.51E-04
41	GO:0006886: intracellular protein transport	8.43E-04
42	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	9.15E-04
43	GO:1900140: regulation of seedling development	9.15E-04
44	GO:0055074: calcium ion homeostasis	9.15E-04
45	GO:0061158: 3'-UTR-mediated mRNA destabilization	9.15E-04
46	GO:0051176: positive regulation of sulfur metabolic process	9.15E-04
47	GO:0072661: protein targeting to plasma membrane	9.15E-04
48	GO:0006517: protein deglycosylation	9.15E-04
49	GO:0070588: calcium ion transmembrane transport	9.26E-04
50	GO:0010053: root epidermal cell differentiation	9.26E-04
51	GO:0009399: nitrogen fixation	1.31E-03
52	GO:0006612: protein targeting to membrane	1.31E-03
53	GO:0072583: clathrin-dependent endocytosis	1.31E-03
54	GO:0010148: transpiration	1.31E-03
55	GO:0001676: long-chain fatty acid metabolic process	1.31E-03
56	GO:0070301: cellular response to hydrogen peroxide	1.31E-03
57	GO:0043207: response to external biotic stimulus	1.31E-03
58	GO:0016998: cell wall macromolecule catabolic process	1.37E-03
59	GO:0010508: positive regulation of autophagy	1.75E-03
60	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	1.75E-03
61	GO:0006542: glutamine biosynthetic process	1.75E-03
62	GO:0048830: adventitious root development	1.75E-03
63	GO:0010363: regulation of plant-type hypersensitive response	1.75E-03
64	GO:0042391: regulation of membrane potential	2.07E-03
65	GO:0030041: actin filament polymerization	2.23E-03
66	GO:0046283: anthocyanin-containing compound metabolic process	2.23E-03
67	GO:0031365: N-terminal protein amino acid modification	2.23E-03
68	GO:0010225: response to UV-C	2.23E-03
69	GO:0009697: salicylic acid biosynthetic process	2.23E-03
70	GO:0061025: membrane fusion	2.40E-03
71	GO:0006623: protein targeting to vacuole	2.57E-03
72	GO:1900425: negative regulation of defense response to bacterium	2.75E-03
73	GO:0009759: indole glucosinolate biosynthetic process	2.75E-03
74	GO:0006751: glutathione catabolic process	2.75E-03
75	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.89E-03
76	GO:0046777: protein autophosphorylation	3.04E-03
77	GO:0030163: protein catabolic process	3.13E-03
78	GO:0009612: response to mechanical stimulus	3.30E-03
79	GO:0010555: response to mannitol	3.30E-03
80	GO:0010310: regulation of hydrogen peroxide metabolic process	3.30E-03
81	GO:2000067: regulation of root morphogenesis	3.30E-03
82	GO:0006979: response to oxidative stress	3.30E-03
83	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.30E-03
84	GO:0000911: cytokinesis by cell plate formation	3.30E-03
85	GO:0050832: defense response to fungus	3.67E-03
86	GO:0070370: cellular heat acclimation	3.89E-03
87	GO:0010044: response to aluminum ion	3.89E-03
88	GO:0009610: response to symbiotic fungus	3.89E-03
89	GO:0046470: phosphatidylcholine metabolic process	3.89E-03
90	GO:0043090: amino acid import	3.89E-03
91	GO:0071446: cellular response to salicylic acid stimulus	3.89E-03
92	GO:0009615: response to virus	3.97E-03
93	GO:0009627: systemic acquired resistance	4.44E-03
94	GO:0042128: nitrate assimilation	4.44E-03
95	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.52E-03
96	GO:0009819: drought recovery	4.52E-03
97	GO:0006491: N-glycan processing	4.52E-03
98	GO:1900150: regulation of defense response to fungus	4.52E-03
99	GO:0016559: peroxisome fission	4.52E-03
100	GO:0010120: camalexin biosynthetic process	5.18E-03
101	GO:0010204: defense response signaling pathway, resistance gene-independent	5.18E-03
102	GO:0006002: fructose 6-phosphate metabolic process	5.18E-03
103	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	5.18E-03
104	GO:0007186: G-protein coupled receptor signaling pathway	5.18E-03
105	GO:0010150: leaf senescence	5.49E-03
106	GO:0010112: regulation of systemic acquired resistance	5.86E-03
107	GO:0009821: alkaloid biosynthetic process	5.86E-03
108	GO:0010119: regulation of stomatal movement	5.99E-03
109	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.58E-03
110	GO:1900426: positive regulation of defense response to bacterium	6.58E-03
111	GO:0048268: clathrin coat assembly	6.58E-03
112	GO:0006995: cellular response to nitrogen starvation	7.33E-03
113	GO:0006032: chitin catabolic process	7.33E-03
114	GO:0009641: shade avoidance	7.33E-03
115	GO:0006887: exocytosis	7.80E-03
116	GO:0006897: endocytosis	7.80E-03
117	GO:0006631: fatty acid metabolic process	7.80E-03
118	GO:0009682: induced systemic resistance	8.11E-03
119	GO:0052544: defense response by callose deposition in cell wall	8.11E-03
120	GO:0009750: response to fructose	8.11E-03
121	GO:0030148: sphingolipid biosynthetic process	8.11E-03
122	GO:0009684: indoleacetic acid biosynthetic process	8.11E-03
123	GO:0002213: defense response to insect	8.92E-03
124	GO:0015706: nitrate transport	8.92E-03
125	GO:0010105: negative regulation of ethylene-activated signaling pathway	8.92E-03
126	GO:0071365: cellular response to auxin stimulus	8.92E-03
127	GO:0012501: programmed cell death	8.92E-03
128	GO:0010102: lateral root morphogenesis	9.75E-03
129	GO:0006807: nitrogen compound metabolic process	9.75E-03
130	GO:0006970: response to osmotic stress	1.05E-02
131	GO:0002237: response to molecule of bacterial origin	1.06E-02
132	GO:0034605: cellular response to heat	1.06E-02
133	GO:0006508: proteolysis	1.09E-02
134	GO:0010167: response to nitrate	1.15E-02
135	GO:0009969: xyloglucan biosynthetic process	1.15E-02
136	GO:0000162: tryptophan biosynthetic process	1.24E-02
137	GO:0009863: salicylic acid mediated signaling pathway	1.34E-02
138	GO:0080147: root hair cell development	1.34E-02
139	GO:0016192: vesicle-mediated transport	1.34E-02
140	GO:0006874: cellular calcium ion homeostasis	1.43E-02
141	GO:0048278: vesicle docking	1.53E-02
142	GO:0015031: protein transport	1.63E-02
143	GO:0016226: iron-sulfur cluster assembly	1.64E-02
144	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.64E-02
145	GO:0007005: mitochondrion organization	1.64E-02
146	GO:0071456: cellular response to hypoxia	1.64E-02
147	GO:0009814: defense response, incompatible interaction	1.64E-02
148	GO:0018105: peptidyl-serine phosphorylation	1.68E-02
149	GO:0009625: response to insect	1.74E-02
150	GO:0006012: galactose metabolic process	1.74E-02
151	GO:0010091: trichome branching	1.85E-02
152	GO:0042147: retrograde transport, endosome to Golgi	1.95E-02
153	GO:0000413: protein peptidyl-prolyl isomerization	2.07E-02
154	GO:0009058: biosynthetic process	2.16E-02
155	GO:0010197: polar nucleus fusion	2.18E-02
156	GO:0046323: glucose import	2.18E-02
157	GO:0008360: regulation of cell shape	2.18E-02
158	GO:0009845: seed germination	2.22E-02
159	GO:0048544: recognition of pollen	2.29E-02
160	GO:0009749: response to glucose	2.41E-02
161	GO:0010183: pollen tube guidance	2.41E-02
162	GO:0000302: response to reactive oxygen species	2.53E-02
163	GO:0010193: response to ozone	2.53E-02
164	GO:0006891: intra-Golgi vesicle-mediated transport	2.53E-02
165	GO:0016032: viral process	2.65E-02
166	GO:0040008: regulation of growth	2.70E-02
167	GO:0006904: vesicle docking involved in exocytosis	3.03E-02
168	GO:0051607: defense response to virus	3.16E-02
169	GO:0006470: protein dephosphorylation	3.23E-02
170	GO:0001666: response to hypoxia	3.29E-02
171	GO:0006906: vesicle fusion	3.56E-02
172	GO:0048573: photoperiodism, flowering	3.70E-02
173	GO:0009737: response to abscisic acid	3.87E-02
174	GO:0008219: cell death	3.97E-02
175	GO:0009817: defense response to fungus, incompatible interaction	3.97E-02
176	GO:0009738: abscisic acid-activated signaling pathway	4.04E-02
177	GO:0010311: lateral root formation	4.12E-02
178	GO:0006499: N-terminal protein myristoylation	4.26E-02
179	GO:0048527: lateral root development	4.41E-02
180	GO:0035556: intracellular signal transduction	4.50E-02
181	GO:0006865: amino acid transport	4.55E-02
182	GO:0045087: innate immune response	4.70E-02
183	GO:0009867: jasmonic acid mediated signaling pathway	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0015591: D-ribose transmembrane transporter activity	0.00E+00
2	GO:0015575: mannitol transmembrane transporter activity	0.00E+00
3	GO:0015148: D-xylose transmembrane transporter activity	0.00E+00
4	GO:0016504: peptidase activator activity	0.00E+00
5	GO:0005365: myo-inositol transmembrane transporter activity	0.00E+00
6	GO:0015576: sorbitol transmembrane transporter activity	0.00E+00
7	GO:0015370: solute:sodium symporter activity	0.00E+00
8	GO:0003837: beta-ureidopropionase activity	0.00E+00
9	GO:0070577: lysine-acetylated histone binding	0.00E+00
10	GO:0005524: ATP binding	1.40E-10
11	GO:0016301: kinase activity	2.56E-09
12	GO:0004012: phospholipid-translocating ATPase activity	2.15E-06
13	GO:0005516: calmodulin binding	2.66E-06
14	GO:0004674: protein serine/threonine kinase activity	3.65E-06
15	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.79E-05
16	GO:0004190: aspartic-type endopeptidase activity	5.56E-05
17	GO:0102391: decanoate--CoA ligase activity	1.43E-04
18	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.47E-04
19	GO:0004467: long-chain fatty acid-CoA ligase activity	1.88E-04
20	GO:0005509: calcium ion binding	2.09E-04
21	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.38E-04
22	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	2.55E-04
23	GO:0015168: glycerol transmembrane transporter activity	2.55E-04
24	GO:0032050: clathrin heavy chain binding	2.55E-04
25	GO:0015085: calcium ion transmembrane transporter activity	2.55E-04
26	GO:0004713: protein tyrosine kinase activity	4.92E-04
27	GO:0008428: ribonuclease inhibitor activity	5.64E-04
28	GO:0045140: inositol phosphoceramide synthase activity	5.64E-04
29	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	5.64E-04
30	GO:0004566: beta-glucuronidase activity	5.64E-04
31	GO:0005388: calcium-transporting ATPase activity	7.37E-04
32	GO:0004557: alpha-galactosidase activity	9.15E-04
33	GO:0003840: gamma-glutamyltransferase activity	9.15E-04
34	GO:0031683: G-protein beta/gamma-subunit complex binding	9.15E-04
35	GO:0036374: glutathione hydrolase activity	9.15E-04
36	GO:0052692: raffinose alpha-galactosidase activity	9.15E-04
37	GO:0001664: G-protein coupled receptor binding	9.15E-04
38	GO:0030552: cAMP binding	9.26E-04
39	GO:0030553: cGMP binding	9.26E-04
40	GO:0005216: ion channel activity	1.25E-03
41	GO:0005354: galactose transmembrane transporter activity	1.31E-03
42	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.31E-03
43	GO:0033612: receptor serine/threonine kinase binding	1.37E-03
44	GO:0030246: carbohydrate binding	1.45E-03
45	GO:0070628: proteasome binding	1.75E-03
46	GO:0043495: protein anchor	1.75E-03
47	GO:0015204: urea transmembrane transporter activity	1.75E-03
48	GO:0005249: voltage-gated potassium channel activity	2.07E-03
49	GO:0030551: cyclic nucleotide binding	2.07E-03
50	GO:0004672: protein kinase activity	2.20E-03
51	GO:0008948: oxaloacetate decarboxylase activity	2.23E-03
52	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	2.23E-03
53	GO:0004356: glutamate-ammonia ligase activity	2.23E-03
54	GO:0015145: monosaccharide transmembrane transporter activity	2.23E-03
55	GO:0003950: NAD+ ADP-ribosyltransferase activity	3.30E-03
56	GO:0004656: procollagen-proline 4-dioxygenase activity	3.30E-03
57	GO:0003872: 6-phosphofructokinase activity	3.89E-03
58	GO:0008235: metalloexopeptidase activity	3.89E-03
59	GO:0009931: calcium-dependent protein serine/threonine kinase activity	4.44E-03
60	GO:0004034: aldose 1-epimerase activity	4.52E-03
61	GO:0004806: triglyceride lipase activity	4.68E-03
62	GO:0004683: calmodulin-dependent protein kinase activity	4.68E-03
63	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	5.18E-03
64	GO:0003843: 1,3-beta-D-glucan synthase activity	5.18E-03
65	GO:0004630: phospholipase D activity	5.18E-03
66	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	6.56E-03
67	GO:0016844: strictosidine synthase activity	6.58E-03
68	GO:0015112: nitrate transmembrane transporter activity	6.58E-03
69	GO:0004568: chitinase activity	7.33E-03
70	GO:0005545: 1-phosphatidylinositol binding	7.33E-03
71	GO:0008047: enzyme activator activity	7.33E-03
72	GO:0004177: aminopeptidase activity	8.11E-03
73	GO:0005484: SNAP receptor activity	8.47E-03
74	GO:0000287: magnesium ion binding	9.35E-03
75	GO:0005515: protein binding	9.49E-03
76	GO:0015293: symporter activity	9.53E-03
77	GO:0005262: calcium channel activity	9.75E-03
78	GO:0005506: iron ion binding	1.05E-02
79	GO:0008061: chitin binding	1.15E-02
80	GO:0003712: transcription cofactor activity	1.15E-02
81	GO:0004970: ionotropic glutamate receptor activity	1.15E-02
82	GO:0005217: intracellular ligand-gated ion channel activity	1.15E-02
83	GO:0031418: L-ascorbic acid binding	1.34E-02
84	GO:0003954: NADH dehydrogenase activity	1.34E-02
85	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.75E-02
86	GO:0003727: single-stranded RNA binding	1.85E-02
87	GO:0019825: oxygen binding	2.02E-02
88	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.10E-02
89	GO:0030276: clathrin binding	2.18E-02
90	GO:0001085: RNA polymerase II transcription factor binding	2.18E-02
91	GO:0005355: glucose transmembrane transporter activity	2.29E-02
92	GO:0010181: FMN binding	2.29E-02
93	GO:0016853: isomerase activity	2.29E-02
94	GO:0015144: carbohydrate transmembrane transporter activity	2.45E-02
95	GO:0008565: protein transporter activity	2.45E-02
96	GO:0005351: sugar:proton symporter activity	2.76E-02
97	GO:0016597: amino acid binding	3.16E-02
98	GO:0051213: dioxygenase activity	3.29E-02
99	GO:0030247: polysaccharide binding	3.70E-02
100	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.70E-02
101	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	4.41E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	2.51E-17
2	GO:0016021: integral component of membrane	1.72E-10
3	GO:0005887: integral component of plasma membrane	9.23E-05
4	GO:0031902: late endosome membrane	1.31E-04
5	GO:0005911: cell-cell junction	2.55E-04
6	GO:0009504: cell plate	2.61E-04
7	GO:0030125: clathrin vesicle coat	4.92E-04
8	GO:0017119: Golgi transport complex	4.92E-04
9	GO:0031304: intrinsic component of mitochondrial inner membrane	5.64E-04
10	GO:0005802: trans-Golgi network	5.68E-04
11	GO:0005789: endoplasmic reticulum membrane	7.53E-04
12	GO:0070062: extracellular exosome	1.31E-03
13	GO:0005905: clathrin-coated pit	1.37E-03
14	GO:0005945: 6-phosphofructokinase complex	2.23E-03
15	GO:0030904: retromer complex	2.75E-03
16	GO:0016363: nuclear matrix	3.30E-03
17	GO:0030131: clathrin adaptor complex	4.52E-03
18	GO:0000148: 1,3-beta-D-glucan synthase complex	5.18E-03
19	GO:0005773: vacuole	5.71E-03
20	GO:0005794: Golgi apparatus	6.27E-03
21	GO:0030665: clathrin-coated vesicle membrane	6.58E-03
22	GO:0005765: lysosomal membrane	8.11E-03
23	GO:0016020: membrane	8.81E-03
24	GO:0005783: endoplasmic reticulum	1.13E-02
25	GO:0005795: Golgi stack	1.15E-02
26	GO:0005741: mitochondrial outer membrane	1.53E-02
27	GO:0005839: proteasome core complex	1.53E-02
28	GO:0009505: plant-type cell wall	1.59E-02
29	GO:0000139: Golgi membrane	1.81E-02
30	GO:0030136: clathrin-coated vesicle	1.95E-02
31	GO:0019898: extrinsic component of membrane	2.41E-02
32	GO:0009506: plasmodesma	2.52E-02
33	GO:0000145: exocyst	2.65E-02
34	GO:0005778: peroxisomal membrane	3.03E-02
35	GO:0030529: intracellular ribonucleoprotein complex	3.29E-02
36	GO:0000932: P-body	3.29E-02
37	GO:0005788: endoplasmic reticulum lumen	3.42E-02
38	GO:0005667: transcription factor complex	3.56E-02
39	GO:0019005: SCF ubiquitin ligase complex	3.97E-02
40	GO:0005618: cell wall	4.52E-02
41	GO:0005777: peroxisome	4.98E-02