GO Enrichment Analysis of Co-expressed Genes with
AT3G23880
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 2 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 3 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 4 | GO:0006003: fructose 2,6-bisphosphate metabolic process | 0.00E+00 |
| 5 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 6 | GO:0015822: ornithine transport | 0.00E+00 |
| 7 | GO:0090706: specification of plant organ position | 0.00E+00 |
| 8 | GO:0006000: fructose metabolic process | 2.08E-06 |
| 9 | GO:0009644: response to high light intensity | 1.57E-05 |
| 10 | GO:0015979: photosynthesis | 5.94E-05 |
| 11 | GO:0006002: fructose 6-phosphate metabolic process | 7.46E-05 |
| 12 | GO:0043953: protein transport by the Tat complex | 1.02E-04 |
| 13 | GO:0000476: maturation of 4.5S rRNA | 1.02E-04 |
| 14 | GO:0000967: rRNA 5'-end processing | 1.02E-04 |
| 15 | GO:0000481: maturation of 5S rRNA | 1.02E-04 |
| 16 | GO:0065002: intracellular protein transmembrane transport | 1.02E-04 |
| 17 | GO:0043609: regulation of carbon utilization | 1.02E-04 |
| 18 | GO:0000066: mitochondrial ornithine transport | 1.02E-04 |
| 19 | GO:0034337: RNA folding | 1.02E-04 |
| 20 | GO:0010450: inflorescence meristem growth | 1.02E-04 |
| 21 | GO:0009773: photosynthetic electron transport in photosystem I | 1.56E-04 |
| 22 | GO:0006094: gluconeogenesis | 2.09E-04 |
| 23 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.40E-04 |
| 24 | GO:0034470: ncRNA processing | 2.40E-04 |
| 25 | GO:0006013: mannose metabolic process | 3.99E-04 |
| 26 | GO:0043617: cellular response to sucrose starvation | 3.99E-04 |
| 27 | GO:0045165: cell fate commitment | 3.99E-04 |
| 28 | GO:0006096: glycolytic process | 4.38E-04 |
| 29 | GO:0001678: cellular glucose homeostasis | 5.73E-04 |
| 30 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 5.73E-04 |
| 31 | GO:0045727: positive regulation of translation | 7.62E-04 |
| 32 | GO:0010023: proanthocyanidin biosynthetic process | 7.62E-04 |
| 33 | GO:0045038: protein import into chloroplast thylakoid membrane | 9.62E-04 |
| 34 | GO:1902183: regulation of shoot apical meristem development | 9.62E-04 |
| 35 | GO:0010158: abaxial cell fate specification | 9.62E-04 |
| 36 | GO:0000741: karyogamy | 1.17E-03 |
| 37 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.17E-03 |
| 38 | GO:0042549: photosystem II stabilization | 1.17E-03 |
| 39 | GO:0000470: maturation of LSU-rRNA | 1.17E-03 |
| 40 | GO:0046835: carbohydrate phosphorylation | 1.40E-03 |
| 41 | GO:0018298: protein-chromophore linkage | 1.47E-03 |
| 42 | GO:0009645: response to low light intensity stimulus | 1.65E-03 |
| 43 | GO:0009642: response to light intensity | 1.90E-03 |
| 44 | GO:0032508: DNA duplex unwinding | 1.90E-03 |
| 45 | GO:0010492: maintenance of shoot apical meristem identity | 1.90E-03 |
| 46 | GO:0032544: plastid translation | 2.17E-03 |
| 47 | GO:0010093: specification of floral organ identity | 2.17E-03 |
| 48 | GO:0009932: cell tip growth | 2.17E-03 |
| 49 | GO:0005975: carbohydrate metabolic process | 2.34E-03 |
| 50 | GO:0048507: meristem development | 2.45E-03 |
| 51 | GO:2000024: regulation of leaf development | 2.45E-03 |
| 52 | GO:0000373: Group II intron splicing | 2.45E-03 |
| 53 | GO:0010205: photoinhibition | 2.74E-03 |
| 54 | GO:0009638: phototropism | 2.74E-03 |
| 55 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.74E-03 |
| 56 | GO:0006782: protoporphyrinogen IX biosynthetic process | 3.05E-03 |
| 57 | GO:0006364: rRNA processing | 3.19E-03 |
| 58 | GO:0043085: positive regulation of catalytic activity | 3.36E-03 |
| 59 | GO:0009750: response to fructose | 3.36E-03 |
| 60 | GO:0005983: starch catabolic process | 3.69E-03 |
| 61 | GO:0018107: peptidyl-threonine phosphorylation | 4.02E-03 |
| 62 | GO:0009718: anthocyanin-containing compound biosynthetic process | 4.02E-03 |
| 63 | GO:0009767: photosynthetic electron transport chain | 4.02E-03 |
| 64 | GO:0005986: sucrose biosynthetic process | 4.02E-03 |
| 65 | GO:0009933: meristem structural organization | 4.37E-03 |
| 66 | GO:0010053: root epidermal cell differentiation | 4.72E-03 |
| 67 | GO:0009944: polarity specification of adaxial/abaxial axis | 5.46E-03 |
| 68 | GO:0080147: root hair cell development | 5.46E-03 |
| 69 | GO:0006418: tRNA aminoacylation for protein translation | 5.85E-03 |
| 70 | GO:0009768: photosynthesis, light harvesting in photosystem I | 5.85E-03 |
| 71 | GO:0061077: chaperone-mediated protein folding | 6.24E-03 |
| 72 | GO:0010017: red or far-red light signaling pathway | 6.64E-03 |
| 73 | GO:0009451: RNA modification | 7.99E-03 |
| 74 | GO:0006810: transport | 8.79E-03 |
| 75 | GO:0010154: fruit development | 8.80E-03 |
| 76 | GO:0009958: positive gravitropism | 8.80E-03 |
| 77 | GO:0006662: glycerol ether metabolic process | 8.80E-03 |
| 78 | GO:0010197: polar nucleus fusion | 8.80E-03 |
| 79 | GO:0009646: response to absence of light | 9.26E-03 |
| 80 | GO:0016032: viral process | 1.07E-02 |
| 81 | GO:0009567: double fertilization forming a zygote and endosperm | 1.17E-02 |
| 82 | GO:0071805: potassium ion transmembrane transport | 1.22E-02 |
| 83 | GO:0010027: thylakoid membrane organization | 1.32E-02 |
| 84 | GO:0009723: response to ethylene | 1.40E-02 |
| 85 | GO:0015995: chlorophyll biosynthetic process | 1.48E-02 |
| 86 | GO:0016311: dephosphorylation | 1.54E-02 |
| 87 | GO:0009737: response to abscisic acid | 1.54E-02 |
| 88 | GO:0048481: plant ovule development | 1.60E-02 |
| 89 | GO:0006499: N-terminal protein myristoylation | 1.71E-02 |
| 90 | GO:0010218: response to far red light | 1.71E-02 |
| 91 | GO:0045454: cell redox homeostasis | 1.80E-02 |
| 92 | GO:0034599: cellular response to oxidative stress | 1.95E-02 |
| 93 | GO:0006839: mitochondrial transport | 2.07E-02 |
| 94 | GO:0006629: lipid metabolic process | 2.22E-02 |
| 95 | GO:0010114: response to red light | 2.26E-02 |
| 96 | GO:0009744: response to sucrose | 2.26E-02 |
| 97 | GO:0006855: drug transmembrane transport | 2.52E-02 |
| 98 | GO:0009585: red, far-red light phototransduction | 2.80E-02 |
| 99 | GO:0006813: potassium ion transport | 2.80E-02 |
| 100 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.86E-02 |
| 101 | GO:0009409: response to cold | 2.99E-02 |
| 102 | GO:0009909: regulation of flower development | 3.01E-02 |
| 103 | GO:0009735: response to cytokinin | 3.60E-02 |
| 104 | GO:0018105: peptidyl-serine phosphorylation | 3.67E-02 |
| 105 | GO:0042744: hydrogen peroxide catabolic process | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 2 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 3 | GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity | 0.00E+00 |
| 4 | GO:0003873: 6-phosphofructo-2-kinase activity | 0.00E+00 |
| 5 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 6 | GO:0005528: FK506 binding | 1.02E-05 |
| 7 | GO:0004565: beta-galactosidase activity | 2.09E-04 |
| 8 | GO:0000064: L-ornithine transmembrane transporter activity | 2.40E-04 |
| 9 | GO:0015929: hexosaminidase activity | 2.40E-04 |
| 10 | GO:0004563: beta-N-acetylhexosaminidase activity | 2.40E-04 |
| 11 | GO:0016868: intramolecular transferase activity, phosphotransferases | 2.40E-04 |
| 12 | GO:0005094: Rho GDP-dissociation inhibitor activity | 2.40E-04 |
| 13 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 2.40E-04 |
| 14 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.40E-04 |
| 15 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.92E-04 |
| 16 | GO:0002161: aminoacyl-tRNA editing activity | 3.99E-04 |
| 17 | GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity | 3.99E-04 |
| 18 | GO:0005536: glucose binding | 7.62E-04 |
| 19 | GO:0004396: hexokinase activity | 7.62E-04 |
| 20 | GO:0019158: mannokinase activity | 7.62E-04 |
| 21 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 7.62E-04 |
| 22 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 7.62E-04 |
| 23 | GO:0042578: phosphoric ester hydrolase activity | 1.17E-03 |
| 24 | GO:2001070: starch binding | 1.17E-03 |
| 25 | GO:0004332: fructose-bisphosphate aldolase activity | 1.17E-03 |
| 26 | GO:0016168: chlorophyll binding | 1.20E-03 |
| 27 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.40E-03 |
| 28 | GO:0004559: alpha-mannosidase activity | 1.40E-03 |
| 29 | GO:0008047: enzyme activator activity | 3.05E-03 |
| 30 | GO:0000049: tRNA binding | 3.69E-03 |
| 31 | GO:0008081: phosphoric diester hydrolase activity | 4.02E-03 |
| 32 | GO:0008266: poly(U) RNA binding | 4.37E-03 |
| 33 | GO:0003723: RNA binding | 4.92E-03 |
| 34 | GO:0031409: pigment binding | 5.09E-03 |
| 35 | GO:0019843: rRNA binding | 5.66E-03 |
| 36 | GO:0015079: potassium ion transmembrane transporter activity | 5.85E-03 |
| 37 | GO:0004176: ATP-dependent peptidase activity | 6.24E-03 |
| 38 | GO:0022891: substrate-specific transmembrane transporter activity | 7.06E-03 |
| 39 | GO:0016491: oxidoreductase activity | 7.45E-03 |
| 40 | GO:0003727: single-stranded RNA binding | 7.48E-03 |
| 41 | GO:0047134: protein-disulfide reductase activity | 7.91E-03 |
| 42 | GO:0004812: aminoacyl-tRNA ligase activity | 7.91E-03 |
| 43 | GO:0050662: coenzyme binding | 9.26E-03 |
| 44 | GO:0004791: thioredoxin-disulfide reductase activity | 9.26E-03 |
| 45 | GO:0042802: identical protein binding | 9.93E-03 |
| 46 | GO:0048038: quinone binding | 1.02E-02 |
| 47 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.12E-02 |
| 48 | GO:0016787: hydrolase activity | 1.55E-02 |
| 49 | GO:0015238: drug transmembrane transporter activity | 1.65E-02 |
| 50 | GO:0005096: GTPase activator activity | 1.65E-02 |
| 51 | GO:0030145: manganese ion binding | 1.77E-02 |
| 52 | GO:0004185: serine-type carboxypeptidase activity | 2.26E-02 |
| 53 | GO:0004519: endonuclease activity | 2.42E-02 |
| 54 | GO:0005515: protein binding | 2.85E-02 |
| 55 | GO:0016298: lipase activity | 2.86E-02 |
| 56 | GO:0016874: ligase activity | 3.44E-02 |
| 57 | GO:0015035: protein disulfide oxidoreductase activity | 3.67E-02 |
| 58 | GO:0004252: serine-type endopeptidase activity | 4.54E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043235: receptor complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.16E-12 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 3.33E-12 |
| 4 | GO:0009543: chloroplast thylakoid lumen | 4.54E-09 |
| 5 | GO:0009579: thylakoid | 3.67E-08 |
| 6 | GO:0009534: chloroplast thylakoid | 5.99E-07 |
| 7 | GO:0009570: chloroplast stroma | 2.64E-06 |
| 8 | GO:0009782: photosystem I antenna complex | 1.02E-04 |
| 9 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.02E-04 |
| 10 | GO:0031361: integral component of thylakoid membrane | 1.02E-04 |
| 11 | GO:0030095: chloroplast photosystem II | 2.37E-04 |
| 12 | GO:0080085: signal recognition particle, chloroplast targeting | 2.40E-04 |
| 13 | GO:0033281: TAT protein transport complex | 3.99E-04 |
| 14 | GO:0010287: plastoglobule | 6.87E-04 |
| 15 | GO:0009523: photosystem II | 7.51E-04 |
| 16 | GO:0009941: chloroplast envelope | 1.63E-03 |
| 17 | GO:0009533: chloroplast stromal thylakoid | 1.65E-03 |
| 18 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 2.17E-03 |
| 19 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.45E-03 |
| 20 | GO:0031307: integral component of mitochondrial outer membrane | 3.69E-03 |
| 21 | GO:0032040: small-subunit processome | 3.69E-03 |
| 22 | GO:0030076: light-harvesting complex | 4.72E-03 |
| 23 | GO:0005623: cell | 5.81E-03 |
| 24 | GO:0042651: thylakoid membrane | 5.85E-03 |
| 25 | GO:0009654: photosystem II oxygen evolving complex | 5.85E-03 |
| 26 | GO:0009505: plant-type cell wall | 6.91E-03 |
| 27 | GO:0019898: extrinsic component of membrane | 9.73E-03 |
| 28 | GO:0048046: apoplast | 1.07E-02 |
| 29 | GO:0030529: intracellular ribonucleoprotein complex | 1.32E-02 |
| 30 | GO:0031977: thylakoid lumen | 2.13E-02 |
| 31 | GO:0043231: intracellular membrane-bounded organelle | 2.45E-02 |
| 32 | GO:0009536: plastid | 2.65E-02 |
| 33 | GO:0005576: extracellular region | 3.50E-02 |
| 34 | GO:0005618: cell wall | 3.85E-02 |
| 35 | GO:0005759: mitochondrial matrix | 4.95E-02 |