co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G23750

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1900000: regulation of anthocyanin catabolic process	0.00E+00
2	GO:1901698: response to nitrogen compound	0.00E+00
3	GO:0000372: Group I intron splicing	0.00E+00
4	GO:0010480: microsporocyte differentiation	5.34E-05
5	GO:0042547: cell wall modification involved in multidimensional cell growth	5.34E-05
6	GO:0034628: 'de novo' NAD biosynthetic process from aspartate	5.34E-05
7	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	9.59E-05
8	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	1.30E-04
9	GO:0006695: cholesterol biosynthetic process	1.30E-04
10	GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement	2.22E-04
11	GO:0006013: mannose metabolic process	2.22E-04
12	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	2.22E-04
13	GO:0071705: nitrogen compound transport	2.22E-04
14	GO:0051176: positive regulation of sulfur metabolic process	2.22E-04
15	GO:0009741: response to brassinosteroid	2.81E-04
16	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	3.48E-04
17	GO:0071249: cellular response to nitrate	4.35E-04
18	GO:0042991: transcription factor import into nucleus	4.35E-04
19	GO:0009435: NAD biosynthetic process	5.52E-04
20	GO:0046785: microtubule polymerization	5.52E-04
21	GO:0006564: L-serine biosynthetic process	5.52E-04
22	GO:0045038: protein import into chloroplast thylakoid membrane	5.52E-04
23	GO:0009826: unidimensional cell growth	6.13E-04
24	GO:0018258: protein O-linked glycosylation via hydroxyproline	6.76E-04
25	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	6.76E-04
26	GO:0006354: DNA-templated transcription, elongation	6.76E-04
27	GO:0010405: arabinogalactan protein metabolic process	6.76E-04
28	GO:0006751: glutathione catabolic process	6.76E-04
29	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	8.05E-04
30	GO:0048437: floral organ development	9.40E-04
31	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	9.40E-04
32	GO:0051510: regulation of unidimensional cell growth	9.40E-04
33	GO:0006402: mRNA catabolic process	1.08E-03
34	GO:0009690: cytokinin metabolic process	1.08E-03
35	GO:0010497: plasmodesmata-mediated intercellular transport	1.23E-03
36	GO:0045337: farnesyl diphosphate biosynthetic process	1.38E-03
37	GO:0033384: geranyl diphosphate biosynthetic process	1.38E-03
38	GO:0000373: Group II intron splicing	1.38E-03
39	GO:0009060: aerobic respiration	1.38E-03
40	GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	1.54E-03
41	GO:2000280: regulation of root development	1.54E-03
42	GO:0048229: gametophyte development	1.88E-03
43	GO:0009742: brassinosteroid mediated signaling pathway	2.05E-03
44	GO:0015706: nitrate transport	2.06E-03
45	GO:0010075: regulation of meristem growth	2.25E-03
46	GO:0030048: actin filament-based movement	2.25E-03
47	GO:2000028: regulation of photoperiodism, flowering	2.25E-03
48	GO:0009718: anthocyanin-containing compound biosynthetic process	2.25E-03
49	GO:0009934: regulation of meristem structural organization	2.43E-03
50	GO:0006468: protein phosphorylation	2.48E-03
51	GO:0010167: response to nitrate	2.63E-03
52	GO:0006833: water transport	2.83E-03
53	GO:0009814: defense response, incompatible interaction	3.68E-03
54	GO:0016226: iron-sulfur cluster assembly	3.68E-03
55	GO:0071369: cellular response to ethylene stimulus	3.90E-03
56	GO:0048653: anther development	4.60E-03
57	GO:0042631: cellular response to water deprivation	4.60E-03
58	GO:0034220: ion transmembrane transport	4.60E-03
59	GO:0009791: post-embryonic development	5.34E-03
60	GO:0048825: cotyledon development	5.34E-03
61	GO:0010090: trichome morphogenesis	6.12E-03
62	GO:0015995: chlorophyll biosynthetic process	8.09E-03
63	GO:0016311: dephosphorylation	8.38E-03
64	GO:0030244: cellulose biosynthetic process	8.68E-03
65	GO:0030001: metal ion transport	1.12E-02
66	GO:0009640: photomorphogenesis	1.23E-02
67	GO:0009664: plant-type cell wall organization	1.44E-02
68	GO:0009736: cytokinin-activated signaling pathway	1.51E-02
69	GO:0006096: glycolytic process	1.70E-02
70	GO:0048316: seed development	1.74E-02
71	GO:0009626: plant-type hypersensitive response	1.78E-02
72	GO:0009740: gibberellic acid mediated signaling pathway	1.86E-02
73	GO:0040008: regulation of growth	2.77E-02
74	GO:0045490: pectin catabolic process	2.87E-02
75	GO:0007166: cell surface receptor signaling pathway	3.15E-02
76	GO:0046777: protein autophosphorylation	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0005048: signal sequence binding	0.00E+00
2	GO:0008987: quinolinate synthetase A activity	0.00E+00
3	GO:1990534: thermospermine oxidase activity	0.00E+00
4	GO:0047807: cytokinin 7-beta-glucosyltransferase activity	5.34E-05
5	GO:0080062: cytokinin 9-beta-glucosyltransferase activity	5.34E-05
6	GO:0003839: gamma-glutamylcyclotransferase activity	1.30E-04
7	GO:0004617: phosphoglycerate dehydrogenase activity	1.30E-04
8	GO:0001872: (1->3)-beta-D-glucan binding	3.25E-04
9	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	4.35E-04
10	GO:1990714: hydroxyproline O-galactosyltransferase activity	6.76E-04
11	GO:0004559: alpha-mannosidase activity	8.05E-04
12	GO:0008312: 7S RNA binding	1.08E-03
13	GO:0004337: geranyltranstransferase activity	1.38E-03
14	GO:0008047: enzyme activator activity	1.71E-03
15	GO:0004161: dimethylallyltranstransferase activity	1.88E-03
16	GO:0003774: motor activity	2.43E-03
17	GO:0008131: primary amine oxidase activity	2.43E-03
18	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.43E-03
19	GO:0008017: microtubule binding	3.46E-03
20	GO:0033612: receptor serine/threonine kinase binding	3.46E-03
21	GO:0019706: protein-cysteine S-palmitoyltransferase activity	3.46E-03
22	GO:0030570: pectate lyase activity	3.90E-03
23	GO:0004674: protein serine/threonine kinase activity	3.93E-03
24	GO:0004518: nuclease activity	5.86E-03
25	GO:0016597: amino acid binding	6.94E-03
26	GO:0015250: water channel activity	7.22E-03
27	GO:0030247: polysaccharide binding	8.09E-03
28	GO:0030145: manganese ion binding	9.61E-03
29	GO:0003993: acid phosphatase activity	1.06E-02
30	GO:0004672: protein kinase activity	1.11E-02
31	GO:0051539: 4 iron, 4 sulfur cluster binding	1.12E-02
32	GO:0035091: phosphatidylinositol binding	1.30E-02
33	GO:0051287: NAD binding	1.40E-02
34	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.51E-02
35	GO:0016298: lipase activity	1.55E-02
36	GO:0045735: nutrient reservoir activity	1.70E-02
37	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.82E-02
38	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.82E-02
39	GO:0046872: metal ion binding	1.96E-02
40	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.19E-02
41	GO:0030246: carbohydrate binding	2.23E-02
42	GO:0016758: transferase activity, transferring hexosyl groups	2.24E-02
43	GO:0019843: rRNA binding	2.28E-02
44	GO:0016829: lyase activity	2.41E-02
45	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.73E-02
46	GO:0003723: RNA binding	2.89E-02
47	GO:0008194: UDP-glycosyltransferase activity	3.11E-02
48	GO:0042802: identical protein binding	3.40E-02
49	GO:0016788: hydrolase activity, acting on ester bonds	3.96E-02
50	GO:0052689: carboxylic ester hydrolase activity	4.89E-02
51	GO:0003729: mRNA binding	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0055028: cortical microtubule	5.04E-05
2	GO:0000428: DNA-directed RNA polymerase complex	5.34E-05
3	GO:0080085: signal recognition particle, chloroplast targeting	1.30E-04
4	GO:0009295: nucleoid	4.47E-04
5	GO:0030529: intracellular ribonucleoprotein complex	5.00E-04
6	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.23E-03
7	GO:0016459: myosin complex	1.71E-03
8	GO:0009570: chloroplast stroma	1.79E-03
9	GO:0009508: plastid chromosome	2.25E-03
10	GO:0030659: cytoplasmic vesicle membrane	2.43E-03
11	GO:0000312: plastid small ribosomal subunit	2.43E-03
12	GO:0005886: plasma membrane	3.16E-03
13	GO:0009532: plastid stroma	3.46E-03
14	GO:0046658: anchored component of plasma membrane	4.36E-03
15	GO:0031225: anchored component of membrane	2.59E-02
16	GO:0022627: cytosolic small ribosomal subunit	3.50E-02
17	GO:0009505: plant-type cell wall	4.20E-02
18	GO:0005874: microtubule	4.45E-02