co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G23620

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000478: endonucleolytic cleavage involved in rRNA processing	0.00E+00
2	GO:0080056: petal vascular tissue pattern formation	0.00E+00
3	GO:0031564: transcription antitermination	0.00E+00
4	GO:0080057: sepal vascular tissue pattern formation	0.00E+00
5	GO:0015865: purine nucleotide transport	7.70E-06
6	GO:0045041: protein import into mitochondrial intermembrane space	7.70E-06
7	GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	7.70E-06
8	GO:0046902: regulation of mitochondrial membrane permeability	2.28E-05
9	GO:0007276: gamete generation	2.28E-05
10	GO:0051131: chaperone-mediated protein complex assembly	2.28E-05
11	GO:0000460: maturation of 5.8S rRNA	3.25E-05
12	GO:0000470: maturation of LSU-rRNA	5.52E-05
13	GO:0006458: 'de novo' protein folding	6.80E-05
14	GO:0042026: protein refolding	6.80E-05
15	GO:0010588: cotyledon vascular tissue pattern formation	2.14E-04
16	GO:0000027: ribosomal large subunit assembly	2.91E-04
17	GO:0051302: regulation of cell division	3.11E-04
18	GO:0061077: chaperone-mediated protein folding	3.32E-04
19	GO:0007005: mitochondrion organization	3.52E-04
20	GO:0010305: leaf vascular tissue pattern formation	4.60E-04
21	GO:0006635: fatty acid beta-oxidation	5.27E-04
22	GO:0009631: cold acclimation	8.71E-04
23	GO:0009744: response to sucrose	1.09E-03
24	GO:0009846: pollen germination	1.26E-03
25	GO:0006364: rRNA processing	1.32E-03
26	GO:0048367: shoot system development	1.50E-03
27	GO:0009845: seed germination	2.03E-03
28	GO:0009790: embryo development	2.14E-03
29	GO:0006413: translational initiation	2.28E-03
30	GO:0009451: RNA modification	2.43E-03
31	GO:0042254: ribosome biogenesis	3.25E-03
32	GO:0006970: response to osmotic stress	3.37E-03
33	GO:0048366: leaf development	3.58E-03
34	GO:0009408: response to heat	4.84E-03
35	GO:0048364: root development	4.98E-03
36	GO:0055085: transmembrane transport	8.49E-03
37	GO:0009414: response to water deprivation	1.16E-02
38	GO:0009409: response to cold	1.46E-02
39	GO:0006810: transport	1.55E-02
40	GO:0046686: response to cadmium ion	1.62E-02
41	GO:0009793: embryo development ending in seed dormancy	2.14E-02
42	GO:0009651: response to salt stress	2.80E-02

Rank	GO Term	Adjusted P value
1	GO:0001072: transcription antitermination factor activity, RNA binding	0.00E+00
2	GO:0042134: rRNA primary transcript binding	2.75E-06
3	GO:0043021: ribonucleoprotein complex binding	7.70E-06
4	GO:0005507: copper ion binding	2.99E-05
5	GO:0005471: ATP:ADP antiporter activity	4.33E-05
6	GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity	5.52E-05
7	GO:0031369: translation initiation factor binding	5.52E-05
8	GO:0003723: RNA binding	7.74E-05
9	GO:0044183: protein binding involved in protein folding	1.78E-04
10	GO:0000166: nucleotide binding	4.70E-04
11	GO:0003697: single-stranded DNA binding	9.23E-04
12	GO:0003690: double-stranded DNA binding	1.35E-03
13	GO:0051082: unfolded protein binding	1.66E-03
14	GO:0003743: translation initiation factor activity	2.65E-03
15	GO:0003676: nucleic acid binding	3.63E-03
16	GO:0004519: endonuclease activity	5.13E-03
17	GO:0003729: mRNA binding	1.56E-02

Rank	GO Term	Adjusted P value
1	GO:0030687: preribosome, large subunit precursor	1.32E-07
2	GO:0071541: eukaryotic translation initiation factor 3 complex, eIF3m	2.75E-06
3	GO:0005730: nucleolus	3.65E-06
4	GO:0070545: PeBoW complex	7.70E-06
5	GO:0005740: mitochondrial envelope	1.60E-04
6	GO:0005852: eukaryotic translation initiation factor 3 complex	1.78E-04
7	GO:0005743: mitochondrial inner membrane	2.48E-04
8	GO:0005774: vacuolar membrane	3.02E-04
9	GO:0005739: mitochondrion	1.05E-03
10	GO:0005759: mitochondrial matrix	2.24E-03
11	GO:0005773: vacuole	4.68E-03
12	GO:0022626: cytosolic ribosome	6.98E-03
13	GO:0016020: membrane	9.48E-03
14	GO:0005829: cytosol	1.08E-02
15	GO:0005789: endoplasmic reticulum membrane	1.59E-02
16	GO:0009535: chloroplast thylakoid membrane	2.09E-02
17	GO:0005618: cell wall	3.15E-02
18	GO:0009941: chloroplast envelope	3.56E-02
19	GO:0005783: endoplasmic reticulum	4.72E-02