GO Enrichment Analysis of Co-expressed Genes with
AT3G23070
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 2 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 3 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 4 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 5 | GO:0071482: cellular response to light stimulus | 4.22E-05 |
| 6 | GO:0010206: photosystem II repair | 5.26E-05 |
| 7 | GO:1900865: chloroplast RNA modification | 6.42E-05 |
| 8 | GO:0010480: microsporocyte differentiation | 7.07E-05 |
| 9 | GO:0000481: maturation of 5S rRNA | 7.07E-05 |
| 10 | GO:0071461: cellular response to redox state | 7.07E-05 |
| 11 | GO:0034337: RNA folding | 7.07E-05 |
| 12 | GO:0048768: root hair cell tip growth | 1.41E-04 |
| 13 | GO:0080005: photosystem stoichiometry adjustment | 1.70E-04 |
| 14 | GO:0018026: peptidyl-lysine monomethylation | 1.70E-04 |
| 15 | GO:0061077: chaperone-mediated protein folding | 2.46E-04 |
| 16 | GO:0006518: peptide metabolic process | 2.86E-04 |
| 17 | GO:0016556: mRNA modification | 4.15E-04 |
| 18 | GO:0009226: nucleotide-sugar biosynthetic process | 4.15E-04 |
| 19 | GO:0043572: plastid fission | 4.15E-04 |
| 20 | GO:2001141: regulation of RNA biosynthetic process | 4.15E-04 |
| 21 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 4.15E-04 |
| 22 | GO:0009152: purine ribonucleotide biosynthetic process | 4.15E-04 |
| 23 | GO:0046653: tetrahydrofolate metabolic process | 4.15E-04 |
| 24 | GO:0010021: amylopectin biosynthetic process | 5.53E-04 |
| 25 | GO:0051781: positive regulation of cell division | 5.53E-04 |
| 26 | GO:0016120: carotene biosynthetic process | 7.00E-04 |
| 27 | GO:0010027: thylakoid membrane organization | 7.13E-04 |
| 28 | GO:0006655: phosphatidylglycerol biosynthetic process | 8.57E-04 |
| 29 | GO:0010256: endomembrane system organization | 8.57E-04 |
| 30 | GO:0016554: cytidine to uridine editing | 8.57E-04 |
| 31 | GO:0009817: defense response to fungus, incompatible interaction | 9.18E-04 |
| 32 | GO:0006458: 'de novo' protein folding | 1.02E-03 |
| 33 | GO:0042026: protein refolding | 1.02E-03 |
| 34 | GO:0048437: floral organ development | 1.19E-03 |
| 35 | GO:0032508: DNA duplex unwinding | 1.37E-03 |
| 36 | GO:0009657: plastid organization | 1.56E-03 |
| 37 | GO:0032544: plastid translation | 1.56E-03 |
| 38 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.97E-03 |
| 39 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.19E-03 |
| 40 | GO:0006415: translational termination | 2.41E-03 |
| 41 | GO:0006352: DNA-templated transcription, initiation | 2.41E-03 |
| 42 | GO:0048229: gametophyte development | 2.41E-03 |
| 43 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.64E-03 |
| 44 | GO:0010075: regulation of meristem growth | 2.88E-03 |
| 45 | GO:0009934: regulation of meristem structural organization | 3.12E-03 |
| 46 | GO:0010020: chloroplast fission | 3.12E-03 |
| 47 | GO:0009306: protein secretion | 5.32E-03 |
| 48 | GO:0048653: anther development | 5.93E-03 |
| 49 | GO:0019252: starch biosynthetic process | 6.89E-03 |
| 50 | GO:0080156: mitochondrial mRNA modification | 7.22E-03 |
| 51 | GO:0009658: chloroplast organization | 7.36E-03 |
| 52 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 9.44E-03 |
| 53 | GO:0015995: chlorophyll biosynthetic process | 1.05E-02 |
| 54 | GO:0009407: toxin catabolic process | 1.21E-02 |
| 55 | GO:0030154: cell differentiation | 1.22E-02 |
| 56 | GO:0006508: proteolysis | 1.26E-02 |
| 57 | GO:0009853: photorespiration | 1.33E-02 |
| 58 | GO:0008152: metabolic process | 1.49E-02 |
| 59 | GO:0009636: response to toxic substance | 1.73E-02 |
| 60 | GO:0048316: seed development | 2.26E-02 |
| 61 | GO:0006396: RNA processing | 2.58E-02 |
| 62 | GO:0051301: cell division | 2.62E-02 |
| 63 | GO:0009058: biosynthetic process | 3.08E-02 |
| 64 | GO:0009793: embryo development ending in seed dormancy | 3.14E-02 |
| 65 | GO:0009790: embryo development | 3.31E-02 |
| 66 | GO:0007623: circadian rhythm | 3.73E-02 |
| 67 | GO:0009451: RNA modification | 3.79E-02 |
| 68 | GO:0009739: response to gibberellin | 4.04E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity | 0.00E+00 |
| 2 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 3 | GO:0004561: alpha-N-acetylglucosaminidase activity | 0.00E+00 |
| 4 | GO:0004856: xylulokinase activity | 7.07E-05 |
| 5 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 7.07E-05 |
| 6 | GO:0003867: 4-aminobutyrate transaminase activity | 7.07E-05 |
| 7 | GO:0033201: alpha-1,4-glucan synthase activity | 1.70E-04 |
| 8 | GO:0005528: FK506 binding | 2.00E-04 |
| 9 | GO:0030267: glyoxylate reductase (NADP) activity | 2.86E-04 |
| 10 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 2.86E-04 |
| 11 | GO:0008864: formyltetrahydrofolate deformylase activity | 2.86E-04 |
| 12 | GO:0004373: glycogen (starch) synthase activity | 2.86E-04 |
| 13 | GO:0004519: endonuclease activity | 3.77E-04 |
| 14 | GO:0016149: translation release factor activity, codon specific | 4.15E-04 |
| 15 | GO:0043023: ribosomal large subunit binding | 4.15E-04 |
| 16 | GO:0004252: serine-type endopeptidase activity | 4.50E-04 |
| 17 | GO:0009011: starch synthase activity | 5.53E-04 |
| 18 | GO:0016279: protein-lysine N-methyltransferase activity | 5.53E-04 |
| 19 | GO:0001053: plastid sigma factor activity | 5.53E-04 |
| 20 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 5.53E-04 |
| 21 | GO:0016987: sigma factor activity | 5.53E-04 |
| 22 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 7.00E-04 |
| 23 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 8.57E-04 |
| 24 | GO:0042578: phosphoric ester hydrolase activity | 8.57E-04 |
| 25 | GO:0008236: serine-type peptidase activity | 8.75E-04 |
| 26 | GO:0004222: metalloendopeptidase activity | 1.01E-03 |
| 27 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.02E-03 |
| 28 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.02E-03 |
| 29 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.70E-03 |
| 30 | GO:0003747: translation release factor activity | 1.76E-03 |
| 31 | GO:0044183: protein binding involved in protein folding | 2.41E-03 |
| 32 | GO:0004022: alcohol dehydrogenase (NAD) activity | 2.88E-03 |
| 33 | GO:0004176: ATP-dependent peptidase activity | 4.44E-03 |
| 34 | GO:0033612: receptor serine/threonine kinase binding | 4.44E-03 |
| 35 | GO:0048038: quinone binding | 7.22E-03 |
| 36 | GO:0008237: metallopeptidase activity | 8.61E-03 |
| 37 | GO:0016597: amino acid binding | 8.97E-03 |
| 38 | GO:0004721: phosphoprotein phosphatase activity | 1.05E-02 |
| 39 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.13E-02 |
| 40 | GO:0004364: glutathione transferase activity | 1.55E-02 |
| 41 | GO:0003723: RNA binding | 1.68E-02 |
| 42 | GO:0043621: protein self-association | 1.68E-02 |
| 43 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.97E-02 |
| 44 | GO:0051082: unfolded protein binding | 2.53E-02 |
| 45 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.02E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.48E-17 |
| 2 | GO:0009570: chloroplast stroma | 1.76E-07 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 1.17E-05 |
| 4 | GO:0009543: chloroplast thylakoid lumen | 2.89E-05 |
| 5 | GO:0009941: chloroplast envelope | 5.35E-04 |
| 6 | GO:0009536: plastid | 6.71E-04 |
| 7 | GO:0009579: thylakoid | 1.04E-03 |
| 8 | GO:0009534: chloroplast thylakoid | 1.05E-03 |
| 9 | GO:0031977: thylakoid lumen | 1.36E-03 |
| 10 | GO:0009501: amyloplast | 1.37E-03 |
| 11 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.76E-03 |
| 12 | GO:0032040: small-subunit processome | 2.64E-03 |
| 13 | GO:0010287: plastoglobule | 3.28E-03 |
| 14 | GO:0043231: intracellular membrane-bounded organelle | 1.49E-02 |
| 15 | GO:0009706: chloroplast inner membrane | 2.53E-02 |
| 16 | GO:0009705: plant-type vacuole membrane | 3.73E-02 |