co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G23050

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0061157: mRNA destabilization	0.00E+00
2	GO:2000505: regulation of energy homeostasis	0.00E+00
3	GO:0033494: ferulate metabolic process	0.00E+00
4	GO:0034220: ion transmembrane transport	1.21E-05
5	GO:0071370: cellular response to gibberellin stimulus	6.91E-05
6	GO:0048829: root cap development	7.43E-05
7	GO:0010143: cutin biosynthetic process	1.36E-04
8	GO:0001736: establishment of planar polarity	1.66E-04
9	GO:0006833: water transport	1.74E-04
10	GO:0003333: amino acid transmembrane transport	2.38E-04
11	GO:1901332: negative regulation of lateral root development	4.06E-04
12	GO:0051513: regulation of monopolar cell growth	4.06E-04
13	GO:0080170: hydrogen peroxide transmembrane transport	4.06E-04
14	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	4.06E-04
15	GO:0009734: auxin-activated signaling pathway	5.36E-04
16	GO:0030104: water homeostasis	5.42E-04
17	GO:0045727: positive regulation of translation	5.42E-04
18	GO:1902456: regulation of stomatal opening	8.40E-04
19	GO:0006810: transport	8.71E-04
20	GO:0010311: lateral root formation	9.34E-04
21	GO:0006865: amino acid transport	1.07E-03
22	GO:1900056: negative regulation of leaf senescence	1.17E-03
23	GO:0046620: regulation of organ growth	1.34E-03
24	GO:0009926: auxin polar transport	1.42E-03
25	GO:0015979: photosynthesis	1.50E-03
26	GO:0032544: plastid translation	1.53E-03
27	GO:0090305: nucleic acid phosphodiester bond hydrolysis	1.73E-03
28	GO:0010206: photosystem II repair	1.73E-03
29	GO:0009051: pentose-phosphate shunt, oxidative branch	1.73E-03
30	GO:0009664: plant-type cell wall organization	1.78E-03
31	GO:0009638: phototropism	1.93E-03
32	GO:0006949: syncytium formation	2.14E-03
33	GO:0048765: root hair cell differentiation	2.36E-03
34	GO:0010015: root morphogenesis	2.36E-03
35	GO:0016024: CDP-diacylglycerol biosynthetic process	2.58E-03
36	GO:0006006: glucose metabolic process	2.82E-03
37	GO:0010030: positive regulation of seed germination	3.30E-03
38	GO:0005985: sucrose metabolic process	3.30E-03
39	GO:0005992: trehalose biosynthetic process	3.81E-03
40	GO:0009735: response to cytokinin	3.82E-03
41	GO:0048511: rhythmic process	4.35E-03
42	GO:0007623: circadian rhythm	4.62E-03
43	GO:0045490: pectin catabolic process	4.62E-03
44	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	4.91E-03
45	GO:0006284: base-excision repair	5.20E-03
46	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	5.50E-03
47	GO:0055085: transmembrane transport	5.79E-03
48	GO:0080022: primary root development	5.80E-03
49	GO:0042631: cellular response to water deprivation	5.80E-03
50	GO:0009958: positive gravitropism	6.11E-03
51	GO:0042752: regulation of circadian rhythm	6.42E-03
52	GO:0071281: cellular response to iron ion	7.73E-03
53	GO:0009828: plant-type cell wall loosening	8.08E-03
54	GO:0009723: response to ethylene	8.25E-03
55	GO:0080167: response to karrikin	8.84E-03
56	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	9.15E-03
57	GO:0018298: protein-chromophore linkage	1.10E-02
58	GO:0009407: toxin catabolic process	1.18E-02
59	GO:0009733: response to auxin	1.21E-02
60	GO:0009644: response to high light intensity	1.65E-02
61	GO:0009636: response to toxic substance	1.69E-02
62	GO:0006364: rRNA processing	1.92E-02
63	GO:0009585: red, far-red light phototransduction	1.92E-02
64	GO:0051603: proteolysis involved in cellular protein catabolic process	1.97E-02
65	GO:0042545: cell wall modification	2.42E-02
66	GO:0009624: response to nematode	2.47E-02
67	GO:0007165: signal transduction	2.65E-02
68	GO:0006470: protein dephosphorylation	4.01E-02
69	GO:0009617: response to bacterium	4.14E-02
70	GO:0042742: defense response to bacterium	4.69E-02
71	GO:0009651: response to salt stress	4.76E-02
72	GO:0009826: unidimensional cell growth	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0010328: auxin influx transmembrane transporter activity	4.77E-06
2	GO:0015250: water channel activity	3.58E-05
3	GO:0050734: hydroxycinnamoyltransferase activity	2.81E-04
4	GO:0010011: auxin binding	5.42E-04
5	GO:0004345: glucose-6-phosphate dehydrogenase activity	5.42E-04
6	GO:0016791: phosphatase activity	5.83E-04
7	GO:0008725: DNA-3-methyladenine glycosylase activity	6.87E-04
8	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	8.40E-04
9	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	8.40E-04
10	GO:0004017: adenylate kinase activity	9.99E-04
11	GO:0003993: acid phosphatase activity	1.16E-03
12	GO:0004564: beta-fructofuranosidase activity	1.34E-03
13	GO:0015293: symporter activity	1.59E-03
14	GO:0004575: sucrose alpha-glucosidase activity	1.93E-03
15	GO:0015171: amino acid transmembrane transporter activity	2.10E-03
16	GO:0004805: trehalose-phosphatase activity	2.14E-03
17	GO:0031072: heat shock protein binding	2.82E-03
18	GO:0008266: poly(U) RNA binding	3.06E-03
19	GO:0019843: rRNA binding	3.36E-03
20	GO:0005528: FK506 binding	3.81E-03
21	GO:0030570: pectate lyase activity	4.91E-03
22	GO:0022891: substrate-specific transmembrane transporter activity	4.91E-03
23	GO:0003756: protein disulfide isomerase activity	5.20E-03
24	GO:0003727: single-stranded RNA binding	5.20E-03
25	GO:0050662: coenzyme binding	6.42E-03
26	GO:0004518: nuclease activity	7.40E-03
27	GO:0016168: chlorophyll binding	9.50E-03
28	GO:0005096: GTPase activator activity	1.14E-02
29	GO:0004722: protein serine/threonine phosphatase activity	1.16E-02
30	GO:0005215: transporter activity	1.19E-02
31	GO:0050661: NADP binding	1.43E-02
32	GO:0004364: glutathione transferase activity	1.51E-02
33	GO:0004185: serine-type carboxypeptidase activity	1.56E-02
34	GO:0051537: 2 iron, 2 sulfur cluster binding	1.65E-02
35	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.74E-02
36	GO:0045330: aspartyl esterase activity	2.07E-02
37	GO:0004650: polygalacturonase activity	2.32E-02
38	GO:0030599: pectinesterase activity	2.37E-02
39	GO:0051082: unfolded protein binding	2.47E-02
40	GO:0016746: transferase activity, transferring acyl groups	2.52E-02
41	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.07E-02
42	GO:0016829: lyase activity	3.07E-02
43	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.47E-02

Rank	GO Term	Adjusted P value
1	GO:0005943: phosphatidylinositol 3-kinase complex, class IA	0.00E+00
2	GO:0043674: columella	6.91E-05
3	GO:0009535: chloroplast thylakoid membrane	7.90E-05
4	GO:0009534: chloroplast thylakoid	1.65E-04
5	GO:0009531: secondary cell wall	4.06E-04
6	GO:0005775: vacuolar lumen	4.06E-04
7	GO:0009505: plant-type cell wall	6.60E-04
8	GO:0042807: central vacuole	1.17E-03
9	GO:0009986: cell surface	1.17E-03
10	GO:0009538: photosystem I reaction center	1.34E-03
11	GO:0009507: chloroplast	1.59E-03
12	GO:0016020: membrane	2.98E-03
13	GO:0005887: integral component of plasma membrane	3.05E-03
14	GO:0030095: chloroplast photosystem II	3.06E-03
15	GO:0010287: plastoglobule	3.18E-03
16	GO:0009543: chloroplast thylakoid lumen	3.36E-03
17	GO:0009570: chloroplast stroma	3.56E-03
18	GO:0009654: photosystem II oxygen evolving complex	4.08E-03
19	GO:0005618: cell wall	4.92E-03
20	GO:0009579: thylakoid	5.37E-03
21	GO:0009523: photosystem II	6.74E-03
22	GO:0019898: extrinsic component of membrane	6.74E-03
23	GO:0015934: large ribosomal subunit	1.22E-02
24	GO:0000325: plant-type vacuole	1.22E-02
25	GO:0031902: late endosome membrane	1.47E-02
26	GO:0005576: extracellular region	2.54E-02
27	GO:0005773: vacuole	2.71E-02
28	GO:0031225: anchored component of membrane	3.63E-02
29	GO:0009705: plant-type vacuole membrane	3.65E-02
30	GO:0009506: plasmodesma	3.86E-02
31	GO:0005886: plasma membrane	4.41E-02
32	GO:0005774: vacuolar membrane	4.95E-02